RNA–Protein interactions for RNA: ENST00000398645.6

KDM2A-202, Transcript of lysine demethylase 2A, humanhuman

TSL 1 (best) BASIC

Gene KDM2A, Length 6,511 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2A-202ENST00000398645 TAF3Q5VWG9 929 aa23.34■■□□□ 1.33
KDM2A-202ENST00000398645 DHX57Q6P158 1386 aaKnown RBP23.33■■□□□ 1.33
KDM2A-202ENST00000398645 NINLQ9Y2I6 1382 aa23.33■■□□□ 1.32
KDM2A-202ENST00000398645 SURF6O75683 361 aaKnown RBP23.32■■□□□ 1.32
KDM2A-202ENST00000398645 ZFP91Q96JP5 570 aaPredicted RBP23.32■■□□□ 1.32
KDM2A-202ENST00000398645 PODXL2Q9NZ53 605 aa23.32■■□□□ 1.32
KDM2A-202ENST00000398645 CCDC66A2RUB6 948 aa23.32■■□□□ 1.32
KDM2A-202ENST00000398645 ERCC4Q92889 916 aaPredicted RBP23.32■■□□□ 1.32
KDM2A-202ENST00000398645 SMARCE1Q969G3 411 aa23.31■■□□□ 1.32
KDM2A-202ENST00000398645 SEPT7Q16181 437 aaKnown RBP23.3■■□□□ 1.32
KDM2A-202ENST00000398645 TSR2Q969E8 191 aaKnown RBP23.3■■□□□ 1.32
KDM2A-202ENST00000398645 SYCP1Q15431 976 aa23.3■■□□□ 1.32
KDM2A-202ENST00000398645 CCDC181Q5TID7 509 aa23.3■■□□□ 1.32
KDM2A-202ENST00000398645 DEF6Q9H4E7 631 aa23.3■■□□□ 1.32
KDM2A-202ENST00000398645 ROCK1Q13464 1354 aa23.3■■□□□ 1.32
KDM2A-202ENST00000398645 CAMK4Q16566 473 aa23.29■■□□□ 1.32
KDM2A-202ENST00000398645 AEBP1Q8IUX7 1158 aa23.29■■□□□ 1.32
KDM2A-202ENST00000398645 STK38Q15208 465 aa23.29■■□□□ 1.32
KDM2A-202ENST00000398645 BCAR3O75815 825 aa23.29■■□□□ 1.32
KDM2A-202ENST00000398645 NOB1Q9ULX3 412 aaKnown RBP23.29■■□□□ 1.32
KDM2A-202ENST00000398645 ADAMTS8Q9UP79 889 aa23.29■■□□□ 1.32
KDM2A-202ENST00000398645 FILIP1LQ4L180 1135 aa23.28■■□□□ 1.32
KDM2A-202ENST00000398645 SKAP1Q86WV1 359 aa23.28■■□□□ 1.32
KDM2A-202ENST00000398645 CBX1P83916 185 aa23.28■■□□□ 1.32
KDM2A-202ENST00000398645 TNMDQ9H2S6 317 aa23.28■■□□□ 1.32
KDM2A-202ENST00000398645 PPP1R1BQ9UD71 204 aaPredicted RBP23.27■■□□□ 1.32
KDM2A-202ENST00000398645 NUP133Q8WUM0 1156 aa23.27■■□□□ 1.32
KDM2A-202ENST00000398645 PSMA5P28066 241 aa23.27■■□□□ 1.32
KDM2A-202ENST00000398645 TTC39AQ5SRH9 613 aa23.27■■□□□ 1.32
KDM2A-202ENST00000398645 CECR2Q9BXF3 1484 aa23.27■■□□□ 1.32
KDM2A-202ENST00000398645 KIAA0754O94854 1291 aa23.26■■□□□ 1.31
KDM2A-202ENST00000398645 LRRFIP2Q9Y608 721 aaKnown RBP23.26■■□□□ 1.31
KDM2A-202ENST00000398645 CARMIL2Q6F5E8 1435 aa23.26■■□□□ 1.31
KDM2A-202ENST00000398645 XBP1P17861 261 aa23.26■■□□□ 1.31
KDM2A-202ENST00000398645 ME1P48163 572 aa23.26■■□□□ 1.31
KDM2A-202ENST00000398645 TMEM132EQ6IEE7 984 aa23.26■■□□□ 1.31
KDM2A-202ENST00000398645 CCDC102AQ96A19 550 aa23.26■■□□□ 1.31
KDM2A-202ENST00000398645 AKNAQ7Z591 1439 aa23.25■■□□□ 1.31
KDM2A-202ENST00000398645 ZBTB9Q96C00 473 aa23.25■■□□□ 1.31
KDM2A-202ENST00000398645 GOLGA6L10A6NI86 522 aa23.24■■□□□ 1.31
KDM2A-202ENST00000398645 NLRP2Q9NX02 1062 aa23.24■■□□□ 1.31
KDM2A-202ENST00000398645 RBM42Q9BTD8 480 aaKnown RBP23.24■■□□□ 1.31
KDM2A-202ENST00000398645 GRPEL1Q9HAV7 217 aa23.24■■□□□ 1.31
KDM2A-202ENST00000398645 CCAR1Q8IX12 1150 aaKnown RBP23.24■■□□□ 1.31
KDM2A-202ENST00000398645 MYO6Q9UM54 1294 aa23.24■■□□□ 1.31
KDM2A-202ENST00000398645 PDCL3Q9H2J4 239 aa23.23■■□□□ 1.31
KDM2A-202ENST00000398645 PPFIBP1Q86W92 1011 aa23.22■■□□□ 1.31
KDM2A-202ENST00000398645 PHF23Q9BUL5 403 aaPredicted RBP23.22■■□□□ 1.31
KDM2A-202ENST00000398645 TICAM2Q86XR7 235 aa23.22■■□□□ 1.31
KDM2A-202ENST00000398645 EXOSC9Q06265 439 aaKnown RBP23.21■■□□□ 1.31
KDM2A-202ENST00000398645 DNA2P51530 1060 aa23.21■■□□□ 1.31
KDM2A-202ENST00000398645 CCDC112Q8NEF3 446 aa23.21■■□□□ 1.31
KDM2A-202ENST00000398645 LETM1O95202 739 aaPredicted RBP23.21■■□□□ 1.31
KDM2A-202ENST00000398645 SRRTQ9BXP5 876 aaKnown RBP23.21■■□□□ 1.31
KDM2A-202ENST00000398645 GNAI1P63096 354 aa23.2■■□□□ 1.31
KDM2A-202ENST00000398645 SSBP05455 408 aaKnown RBP eCLIP23.2■■□□□ 1.3
KDM2A-202ENST00000398645 FILIP1Q7Z7B0 1213 aa23.2■■□□□ 1.3
KDM2A-202ENST00000398645 MYL6BP14649 208 aa23.2■■□□□ 1.3
KDM2A-202ENST00000398645 SSR1P43307 286 aaKnown RBP23.2■■□□□ 1.3
KDM2A-202ENST00000398645 KIF7Q2M1P5 1343 aa23.19■■□□□ 1.3
KDM2A-202ENST00000398645 MATR3P43243 847 aaKnown RBP eCLIP23.18■■□□□ 1.3
KDM2A-202ENST00000398645 DDX54Q8TDD1 881 aaKnown RBP23.18■■□□□ 1.3
KDM2A-202ENST00000398645 CNNM1Q9NRU3 951 aa23.18■■□□□ 1.3
KDM2A-202ENST00000398645 CCDC85AQ96PX6 553 aaPredicted RBP23.17■■□□□ 1.3
KDM2A-202ENST00000398645 ZNF396Q96N95 335 aaPredicted RBP23.17■■□□□ 1.3
KDM2A-202ENST00000398645 CCDC113Q9H0I3 377 aa23.17■■□□□ 1.3
KDM2A-202ENST00000398645 CCDC18Q5T9S5 1454 aa23.17■■□□□ 1.3
KDM2A-202ENST00000398645 RAPGEF4Q8WZA2 1011 aa23.16■■□□□ 1.3
KDM2A-202ENST00000398645 SART3Q15020 963 aaKnown RBP23.16■■□□□ 1.3
KDM2A-202ENST00000398645 ZNHIT6Q9NWK9 470 aaKnown RBP23.16■■□□□ 1.3
KDM2A-202ENST00000398645 HSP90AB4PQ58FF6 505 aa23.16■■□□□ 1.3
KDM2A-202ENST00000398645 DDX11Q96FC9 970 aa23.16■■□□□ 1.3
KDM2A-202ENST00000398645 TBC1D2BQ9UPU7 963 aa23.16■■□□□ 1.3
KDM2A-202ENST00000398645 ERLIN2O94905 339 aa23.16■■□□□ 1.3
KDM2A-202ENST00000398645 TXLNAP40222 546 aa23.15■■□□□ 1.3
KDM2A-202ENST00000398645 CCDC192P0DO97 292 aa23.15■■□□□ 1.3
KDM2A-202ENST00000398645 MTHFSP49914 203 aa23.15■■□□□ 1.3
KDM2A-202ENST00000398645 SYCE3A1L190 88 aa23.15■■□□□ 1.3
KDM2A-202ENST00000398645 CWC27Q6UX04 472 aaKnown RBP23.15■■□□□ 1.3
KDM2A-202ENST00000398645 CLASRPQ8N2M8 674 aaKnown RBP23.14■■□□□ 1.3
KDM2A-202ENST00000398645 FKBP4Q02790 459 aaKnown RBP eCLIP23.14■■□□□ 1.29
KDM2A-202ENST00000398645 LARP6Q9BRS8 491 aaKnown RBP23.14■■□□□ 1.29
KDM2A-202ENST00000398645 CCDC69A6NI79 296 aa23.14■■□□□ 1.29
KDM2A-202ENST00000398645 LRRCC1Q9C099 1032 aa23.14■■□□□ 1.29
KDM2A-202ENST00000398645 STRN4Q9NRL3 753 aa23.13■■□□□ 1.29
KDM2A-202ENST00000398645 POLR3GO15318 223 aaPredicted RBP23.13■■□□□ 1.29
KDM2A-202ENST00000398645 MTERF4Q7Z6M4 381 aaKnown RBP23.12■■□□□ 1.29
KDM2A-202ENST00000398645 GOLGA6L10A0A0M3HER8 536 aa23.12■■□□□ 1.29
KDM2A-202ENST00000398645 VGFO15240 615 aaPredicted RBP23.12■■□□□ 1.29
KDM2A-202ENST00000398645 RBM5P52756 815 aaKnown RBP eCLIP23.12■■□□□ 1.29
KDM2A-202ENST00000398645 CHMP4BP1P59074 171 aa23.12■■□□□ 1.29
KDM2A-202ENST00000398645 BCCIPQ9P287 314 aaKnown RBP eCLIP23.11■■□□□ 1.29
KDM2A-202ENST00000398645 LARP1BQ659C4 914 aaKnown RBP23.11■■□□□ 1.29
KDM2A-202ENST00000398645 GPATCH11Q8N954 259 aa23.11■■□□□ 1.29
KDM2A-202ENST00000398645 CCDC97Q96F63 343 aaPredicted RBP23.11■■□□□ 1.29
KDM2A-202ENST00000398645 K7ELQ4 463 aaPredicted RBP23.1■■□□□ 1.29
KDM2A-202ENST00000398645 CCP110O43303 1012 aa23.1■■□□□ 1.29
KDM2A-202ENST00000398645 DHX8Q14562 1220 aaKnown RBP23.1■■□□□ 1.29
KDM2A-202ENST00000398645 CYP46A1Q9Y6A2 500 aa23.1■■□□□ 1.29
KDM2A-202ENST00000398645 WWC2Q6AWC2 1192 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms