RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 CCDC27Q2M243 656 aa17.43■□□□□ 0.38
PCDHA11-201ENST00000398640 DIAPH3Q9NSV4 1193 aa17.43■□□□□ 0.38
PCDHA11-201ENST00000398640 EXOC6Q8TAG9 804 aa17.43■□□□□ 0.38
PCDHA11-201ENST00000398640 PHF8Q9UPP1 1060 aa17.43■□□□□ 0.38
PCDHA11-201ENST00000398640 KIF6Q6ZMV9 814 aa17.42■□□□□ 0.38
PCDHA11-201ENST00000398640 IFIT2P09913 472 aaKnown RBP17.42■□□□□ 0.38
PCDHA11-201ENST00000398640 CEP170Q5SW79 1584 aa17.42■□□□□ 0.38
PCDHA11-201ENST00000398640 MTMR7Q9Y216 660 aa17.42■□□□□ 0.38
PCDHA11-201ENST00000398640 GOLGA6L1Q8N7Z2 621 aa17.42■□□□□ 0.38
PCDHA11-201ENST00000398640 FKBP5Q13451 457 aaPredicted RBP17.41■□□□□ 0.38
PCDHA11-201ENST00000398640 FBXO3Q9UK99 471 aa17.41■□□□□ 0.38
PCDHA11-201ENST00000398640 RIC3Q7Z5B4 369 aa17.41■□□□□ 0.38
PCDHA11-201ENST00000398640 RUNDC1Q96C34 613 aa17.41■□□□□ 0.38
PCDHA11-201ENST00000398640 COG6Q9Y2V7 657 aa17.41■□□□□ 0.38
PCDHA11-201ENST00000398640 ITSN2Q9NZM3 1697 aa17.41■□□□□ 0.38
PCDHA11-201ENST00000398640 ZKSCAN2Q63HK3 967 aa17.41■□□□□ 0.38
PCDHA11-201ENST00000398640 NUP153P49790 1475 aaKnown RBP17.4■□□□□ 0.38
PCDHA11-201ENST00000398640 UHRF1BP1LA0JNW5 1464 aa17.4■□□□□ 0.38
PCDHA11-201ENST00000398640 CCDC61Q9Y6R9 512 aa17.4■□□□□ 0.38
PCDHA11-201ENST00000398640 ABCC10Q5T3U5 1492 aa17.4■□□□□ 0.38
PCDHA11-201ENST00000398640 GPATCH8Q9UKJ3 1502 aaKnown RBP17.4■□□□□ 0.38
PCDHA11-201ENST00000398640 PHF14O94880 888 aa17.4■□□□□ 0.38
PCDHA11-201ENST00000398640 LRRFIP1Q32MZ4 808 aaKnown RBP17.39■□□□□ 0.37
PCDHA11-201ENST00000398640 GNAI1P63096 354 aa17.39■□□□□ 0.37
PCDHA11-201ENST00000398640 SLC12A5Q9H2X9 1139 aa17.39■□□□□ 0.37
PCDHA11-201ENST00000398640 NCKAP5LQ9HCH0 1330 aa17.39■□□□□ 0.37
PCDHA11-201ENST00000398640 NFXL1Q6ZNB6 911 aa17.39■□□□□ 0.37
PCDHA11-201ENST00000398640 E9PSI1 815 aa17.38■□□□□ 0.37
PCDHA11-201ENST00000398640 CCDC43Q96MW1 224 aaKnown RBP17.38■□□□□ 0.37
PCDHA11-201ENST00000398640 SYCP2Q9BX26 1530 aa17.38■□□□□ 0.37
PCDHA11-201ENST00000398640 FOXO3O43524 673 aa17.38■□□□□ 0.37
PCDHA11-201ENST00000398640 G3BP1Q13283 466 aaKnown RBP eCLIP17.38■□□□□ 0.37
PCDHA11-201ENST00000398640 ANO2Q9NQ90 1003 aa17.38■□□□□ 0.37
PCDHA11-201ENST00000398640 APAF1O14727 1248 aa17.38■□□□□ 0.37
PCDHA11-201ENST00000398640 NEUROD6Q96NK8 337 aa17.38■□□□□ 0.37
PCDHA11-201ENST00000398640 KRT28Q7Z3Y7 464 aa17.37■□□□□ 0.37
PCDHA11-201ENST00000398640 UHRF1BP1Q6BDS2 1440 aa17.37■□□□□ 0.37
PCDHA11-201ENST00000398640 MTHFSP49914 203 aa17.37■□□□□ 0.37
PCDHA11-201ENST00000398640 CCAR2Q8N163 923 aaKnown RBP17.37■□□□□ 0.37
PCDHA11-201ENST00000398640 LMTK3Q96Q04 1460 aa17.37■□□□□ 0.37
PCDHA11-201ENST00000398640 TRIM29Q14134 588 aa17.37■□□□□ 0.37
PCDHA11-201ENST00000398640 CNTLNQ9NXG0 1405 aa17.36■□□□□ 0.37
PCDHA11-201ENST00000398640 MAP3K1Q13233 1512 aa17.36■□□□□ 0.37
PCDHA11-201ENST00000398640 TSR1Q2NL82 804 aaKnown RBP17.36■□□□□ 0.37
PCDHA11-201ENST00000398640 ZNF530Q6P9A1 599 aaPredicted RBP17.36■□□□□ 0.37
PCDHA11-201ENST00000398640 FOSBP53539 338 aa17.36■□□□□ 0.37
PCDHA11-201ENST00000398640 DUOX2Q9NRD8 1548 aa17.35■□□□□ 0.37
PCDHA11-201ENST00000398640 KIF7Q2M1P5 1343 aa17.35■□□□□ 0.37
PCDHA11-201ENST00000398640 PCMTD1Q96MG8 357 aaPredicted RBP17.35■□□□□ 0.37
PCDHA11-201ENST00000398640 IKQ13123 557 aaPredicted RBP17.35■□□□□ 0.37
PCDHA11-201ENST00000398640 GOLGA6L19H0YKK7 550 aa17.34■□□□□ 0.37
PCDHA11-201ENST00000398640 TPM2P07951 284 aa17.34■□□□□ 0.37
PCDHA11-201ENST00000398640 ERICH2A1L162 156 aa17.34■□□□□ 0.37
PCDHA11-201ENST00000398640 CCAR1Q8IX12 1150 aaKnown RBP17.34■□□□□ 0.37
PCDHA11-201ENST00000398640 CCDC7Q96M83 1385 aa17.34■□□□□ 0.37
PCDHA11-201ENST00000398640 BECN2A8MW95 431 aa17.33■□□□□ 0.37
PCDHA11-201ENST00000398640 RRP1P56182 461 aaKnown RBP17.33■□□□□ 0.37
PCDHA11-201ENST00000398640 ZNF428Q96B54 188 aa17.33■□□□□ 0.37
PCDHA11-201ENST00000398640 TRDNQ13061 729 aa17.33■□□□□ 0.37
PCDHA11-201ENST00000398640 CENPQQ7L2Z9 268 aaPredicted RBP17.33■□□□□ 0.37
PCDHA11-201ENST00000398640 DDX49Q9Y6V7 483 aaKnown RBP17.33■□□□□ 0.36
PCDHA11-201ENST00000398640 KDM4AO75164 1064 aa17.33■□□□□ 0.36
PCDHA11-201ENST00000398640 CPLX1O14810 134 aa17.32■□□□□ 0.36
PCDHA11-201ENST00000398640 NOS1P29475 1434 aa17.32■□□□□ 0.36
PCDHA11-201ENST00000398640 NCOA1Q15788 1441 aa17.32■□□□□ 0.36
PCDHA11-201ENST00000398640 NAIPQ13075 1403 aa17.32■□□□□ 0.36
PCDHA11-201ENST00000398640 PRKRIP1Q9H875 184 aaPredicted RBP17.32■□□□□ 0.36
PCDHA11-201ENST00000398640 WASHC4Q2M389 1173 aa17.31■□□□□ 0.36
PCDHA11-201ENST00000398640 SULT6B1Q6IMI4 303 aa17.31■□□□□ 0.36
PCDHA11-201ENST00000398640 CPLX2Q6PUV4 134 aaKnown RBP17.31■□□□□ 0.36
PCDHA11-201ENST00000398640 RUFY2Q8WXA3 655 aa17.31■□□□□ 0.36
PCDHA11-201ENST00000398640 TRAPPC8Q9Y2L5 1435 aa17.31■□□□□ 0.36
PCDHA11-201ENST00000398640 WASLO00401 505 aaPredicted RBP17.31■□□□□ 0.36
PCDHA11-201ENST00000398640 ZMYM3Q14202 1370 aa17.3■□□□□ 0.36
PCDHA11-201ENST00000398640 ABCA5Q8WWZ7 1642 aa17.3■□□□□ 0.36
PCDHA11-201ENST00000398640 ATP10AO60312 1499 aa17.3■□□□□ 0.36
PCDHA11-201ENST00000398640 PDE4AP27815 886 aa17.3■□□□□ 0.36
PCDHA11-201ENST00000398640 TNNT3P45378 269 aaPredicted RBP17.3■□□□□ 0.36
PCDHA11-201ENST00000398640 DDX11L8A8MPP1 907 aa17.3■□□□□ 0.36
PCDHA11-201ENST00000398640 ZKSCAN1P17029 563 aaPredicted RBP17.3■□□□□ 0.36
PCDHA11-201ENST00000398640 API5Q9BZZ5 524 aaKnown RBP17.3■□□□□ 0.36
PCDHA11-201ENST00000398640 PRKAR2BP31323 418 aa17.3■□□□□ 0.36
PCDHA11-201ENST00000398640 RRS1Q15050 365 aaKnown RBP17.29■□□□□ 0.36
PCDHA11-201ENST00000398640 FAM161AQ3B820 660 aa17.29■□□□□ 0.36
PCDHA11-201ENST00000398640 PNISRQ8TF01 805 aaKnown RBP17.29■□□□□ 0.36
PCDHA11-201ENST00000398640 RIMS2Q9UQ26 1411 aa17.29■□□□□ 0.36
PCDHA11-201ENST00000398640 ATP6V1DQ9Y5K8 247 aa17.28■□□□□ 0.36
PCDHA11-201ENST00000398640 TPM1P09493 284 aa17.28■□□□□ 0.36
PCDHA11-201ENST00000398640 ADGRF5Q8IZF2 1346 aa17.28■□□□□ 0.36
PCDHA11-201ENST00000398640 DNAJC5Q9H3Z4 198 aa17.27■□□□□ 0.36
PCDHA11-201ENST00000398640 CCDC30Q5VVM6 783 aa17.26■□□□□ 0.35
PCDHA11-201ENST00000398640 ZNF592Q92610 1267 aa17.26■□□□□ 0.35
PCDHA11-201ENST00000398640 CHMP4CQ96CF2 233 aa17.26■□□□□ 0.35
PCDHA11-201ENST00000398640 C8orf37Q96NL8 207 aa17.26■□□□□ 0.35
PCDHA11-201ENST00000398640 DDX19BQ9UMR2 479 aa17.26■□□□□ 0.35
PCDHA11-201ENST00000398640 DZIP1LQ8IYY4 767 aaKnown RBP17.25■□□□□ 0.35
PCDHA11-201ENST00000398640 NPHP3Q7Z494 1330 aa17.25■□□□□ 0.35
PCDHA11-201ENST00000398640 EXOC5O00471 708 aa17.25■□□□□ 0.35
PCDHA11-201ENST00000398640 TMOD3Q9NYL9 352 aa17.25■□□□□ 0.35
PCDHA11-201ENST00000398640 BICD2Q8TD16 824 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms