RNA–Protein interactions for RNA: ENST00000398559.6

TMF1-201, Transcript of TATA element modulatory factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMF1, Length 6,849 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMF1-201ENST00000398559 PDCP20941 246 aa14.08□□□□□ -0.16
TMF1-201ENST00000398559 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.08□□□□□ -0.16
TMF1-201ENST00000398559 FGD6Q6ZV73 1430 aa14.08□□□□□ -0.16
TMF1-201ENST00000398559 CUX1P39880 1505 aa14.08□□□□□ -0.16
TMF1-201ENST00000398559 AXDND1Q5T1B0 1012 aaPredicted RBP14.08□□□□□ -0.16
TMF1-201ENST00000398559 MYO6Q9UM54 1294 aa14.08□□□□□ -0.16
TMF1-201ENST00000398559 GNAI3P08754 354 aa14.07□□□□□ -0.16
TMF1-201ENST00000398559 MPNDQ8N594 471 aa14.07□□□□□ -0.16
TMF1-201ENST00000398559 MAGEC2Q9UBF1 373 aaPredicted RBP14.07□□□□□ -0.16
TMF1-201ENST00000398559 GCC1Q96CN9 775 aa14.07□□□□□ -0.16
TMF1-201ENST00000398559 CADPSQ9ULU8 1353 aa14.07□□□□□ -0.16
TMF1-201ENST00000398559 PPP2R1AP30153 589 aa14.07□□□□□ -0.16
TMF1-201ENST00000398559 CCDC30Q5VVM6 783 aa14.07□□□□□ -0.16
TMF1-201ENST00000398559 PKNOX2Q96KN3 472 aa14.07□□□□□ -0.16
TMF1-201ENST00000398559 RBM33Q96EV2 1170 aaKnown RBP14.07□□□□□ -0.16
TMF1-201ENST00000398559 TSPYL1Q9H0U9 437 aa14.06□□□□□ -0.16
TMF1-201ENST00000398559 CWC22Q9HCG8 908 aaKnown RBP14.06□□□□□ -0.16
TMF1-201ENST00000398559 BCAR3O75815 825 aa14.06□□□□□ -0.16
TMF1-201ENST00000398559 BACH2Q9BYV9 841 aa14.06□□□□□ -0.16
TMF1-201ENST00000398559 HIP1O00291 1037 aa14.06□□□□□ -0.16
TMF1-201ENST00000398559 STK38Q15208 465 aa14.06□□□□□ -0.16
TMF1-201ENST00000398559 RAPGEF4Q8WZA2 1011 aa14.06□□□□□ -0.16
TMF1-201ENST00000398559 PRDM2Q13029 1718 aa14.06□□□□□ -0.16
TMF1-201ENST00000398559 CCDC192P0DO97 292 aa14.06□□□□□ -0.16
TMF1-201ENST00000398559 SART3Q15020 963 aaKnown RBP14.06□□□□□ -0.16
TMF1-201ENST00000398559 UQCRHLA0A096LP55 91 aa14.06□□□□□ -0.16
TMF1-201ENST00000398559 UQCRHP07919 91 aa14.06□□□□□ -0.16
TMF1-201ENST00000398559 K7ELQ4 463 aaPredicted RBP14.05□□□□□ -0.16
TMF1-201ENST00000398559 SERPINC1P01008 464 aa14.05□□□□□ -0.16
TMF1-201ENST00000398559 NUTM2GQ5VZR2 741 aa14.05□□□□□ -0.16
TMF1-201ENST00000398559 TNMDQ9H2S6 317 aa14.05□□□□□ -0.16
TMF1-201ENST00000398559 STK3Q13188 491 aa14.05□□□□□ -0.16
TMF1-201ENST00000398559 PTPRGP23470 1445 aa14.05□□□□□ -0.16
TMF1-201ENST00000398559 ZNF644Q9H582 1327 aaPredicted RBP14.04□□□□□ -0.16
TMF1-201ENST00000398559 PDE3AQ14432 1141 aa14.04□□□□□ -0.16
TMF1-201ENST00000398559 TWISTNBQ3B726 338 aaPredicted RBP14.04□□□□□ -0.16
TMF1-201ENST00000398559 TBC1D2BQ9UPU7 963 aa14.04□□□□□ -0.16
TMF1-201ENST00000398559 GNAI2P04899 355 aa14.04□□□□□ -0.16
TMF1-201ENST00000398559 TMEM132EQ6IEE7 984 aa14.03□□□□□ -0.16
TMF1-201ENST00000398559 CNKSR2Q8WXI2 1034 aa14.03□□□□□ -0.16
TMF1-201ENST00000398559 CCDC112Q8NEF3 446 aa14.03□□□□□ -0.16
TMF1-201ENST00000398559 TSR2Q969E8 191 aaKnown RBP14.03□□□□□ -0.16
TMF1-201ENST00000398559 CDK5RAP3Q96JB5 506 aa14.03□□□□□ -0.16
TMF1-201ENST00000398559 CT47B1P0C2W7 299 aaPredicted RBP14.03□□□□□ -0.16
TMF1-201ENST00000398559 TXLNAP40222 546 aa14.03□□□□□ -0.16
TMF1-201ENST00000398559 AEBP1Q8IUX7 1158 aa14.03□□□□□ -0.16
TMF1-201ENST00000398559 CYP46A1Q9Y6A2 500 aa14.03□□□□□ -0.16
TMF1-201ENST00000398559 MAP4K4O95819 1239 aaPredicted RBP14.02□□□□□ -0.16
TMF1-201ENST00000398559 PRKAR2BP31323 418 aa14.02□□□□□ -0.16
TMF1-201ENST00000398559 WDR33Q9C0J8 1336 aaKnown RBP14.02□□□□□ -0.17
TMF1-201ENST00000398559 ERC1Q8IUD2 1116 aa14.01□□□□□ -0.17
TMF1-201ENST00000398559 FAM177A1Q8N128 213 aaPredicted RBP14.01□□□□□ -0.17
TMF1-201ENST00000398559 PLCD4Q9BRC7 762 aa14.01□□□□□ -0.17
TMF1-201ENST00000398559 PPFIBP1Q86W92 1011 aa14.01□□□□□ -0.17
TMF1-201ENST00000398559 IKQ13123 557 aaPredicted RBP14.01□□□□□ -0.17
TMF1-201ENST00000398559 ZNHIT6Q9NWK9 470 aaKnown RBP14.01□□□□□ -0.17
TMF1-201ENST00000398559 ME1P48163 572 aa14□□□□□ -0.17
TMF1-201ENST00000398559 NLRP2Q9NX02 1062 aa14□□□□□ -0.17
TMF1-201ENST00000398559 PIP4K2AP48426 406 aaPredicted RBP14□□□□□ -0.17
TMF1-201ENST00000398559 TTC39AQ5SRH9 613 aa14□□□□□ -0.17
TMF1-201ENST00000398559 STAC3Q96MF2 364 aa14□□□□□ -0.17
TMF1-201ENST00000398559 GAS2L2Q8NHY3 880 aa13.99□□□□□ -0.17
TMF1-201ENST00000398559 LRRCC1Q9C099 1032 aa13.99□□□□□ -0.17
TMF1-201ENST00000398559 LRRC9Q6ZRR7 1453 aa13.99□□□□□ -0.17
TMF1-201ENST00000398559 KRT85P78386 507 aa13.99□□□□□ -0.17
TMF1-201ENST00000398559 ANKRD1Q15327 319 aa13.99□□□□□ -0.17
TMF1-201ENST00000398559 HSP90AB3PQ58FF7 597 aa13.99□□□□□ -0.17
TMF1-201ENST00000398559 GOLGA6L10A6NI86 522 aa13.99□□□□□ -0.17
TMF1-201ENST00000398559 CCAR1Q8IX12 1150 aaKnown RBP13.99□□□□□ -0.17
TMF1-201ENST00000398559 JMYQ8N9B5 988 aa13.99□□□□□ -0.17
TMF1-201ENST00000398559 ANKRD50Q9ULJ7 1429 aa13.98□□□□□ -0.17
TMF1-201ENST00000398559 DHX8Q14562 1220 aaKnown RBP13.98□□□□□ -0.17
TMF1-201ENST00000398559 STK11IPQ8N1F8 1099 aa13.98□□□□□ -0.17
TMF1-201ENST00000398559 KIF21BO75037 1637 aa13.98□□□□□ -0.17
TMF1-201ENST00000398559 ERLIN2O94905 339 aa13.98□□□□□ -0.17
TMF1-201ENST00000398559 SLC4A2P04920 1241 aa13.98□□□□□ -0.17
TMF1-201ENST00000398559 SYCP1Q15431 976 aa13.98□□□□□ -0.17
TMF1-201ENST00000398559 DACH1Q9UI36 760 aa13.98□□□□□ -0.17
TMF1-201ENST00000398559 KIAA0754O94854 1291 aa13.98□□□□□ -0.17
TMF1-201ENST00000398559 KRT18P05783 430 aaKnown RBP13.98□□□□□ -0.17
TMF1-201ENST00000398559 CCDC181Q5TID7 509 aa13.98□□□□□ -0.17
TMF1-201ENST00000398559 LARP1BQ659C4 914 aaKnown RBP13.98□□□□□ -0.17
TMF1-201ENST00000398559 CHD1LQ86WJ1 897 aa13.98□□□□□ -0.17
TMF1-201ENST00000398559 FAM177BA6PVY3 158 aa13.98□□□□□ -0.17
TMF1-201ENST00000398559 NLRP6P59044 892 aa13.98□□□□□ -0.17
TMF1-201ENST00000398559 MCM4P33991 863 aa13.97□□□□□ -0.17
TMF1-201ENST00000398559 DEF6Q9H4E7 631 aa13.97□□□□□ -0.17
TMF1-201ENST00000398559 SMG6Q86US8 1419 aaKnown RBP13.97□□□□□ -0.17
TMF1-201ENST00000398559 SLC3A2P08195 630 aaKnown RBP13.97□□□□□ -0.17
TMF1-201ENST00000398559 MVPQ14764 893 aaKnown RBP13.97□□□□□ -0.17
TMF1-201ENST00000398559 ESPNB1AK53 854 aa13.96□□□□□ -0.17
TMF1-201ENST00000398559 NEFHP12036 1026 aa13.96□□□□□ -0.17
TMF1-201ENST00000398559 CCDC158Q5M9N0 1113 aa13.96□□□□□ -0.17
TMF1-201ENST00000398559 CBFA2T2O43439 604 aa13.96□□□□□ -0.17
TMF1-201ENST00000398559 ERLIN1O75477 346 aa13.96□□□□□ -0.17
TMF1-201ENST00000398559 SIL1Q9H173 461 aa13.96□□□□□ -0.17
TMF1-201ENST00000398559 FANCD2Q9BXW9 1451 aa13.96□□□□□ -0.17
TMF1-201ENST00000398559 EIF3JO75822 258 aaKnown RBP13.96□□□□□ -0.18
TMF1-201ENST00000398559 KIF6Q6ZMV9 814 aa13.96□□□□□ -0.18
TMF1-201ENST00000398559 SPATA32Q96LK8 384 aa13.96□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms