RNA–Protein interactions for RNA: ENST00000398339.5

TCF4-203, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-203ENST00000398339 HSP90AA1P07900 732 aaKnown RBP10.36□□□□□ -0.75
TCF4-203ENST00000398339 RBM25P49756 843 aaKnown RBP10.36□□□□□ -0.75
TCF4-203ENST00000398339 SETBP1Q9Y6X0 1596 aa10.36□□□□□ -0.75
TCF4-203ENST00000398339 ESPNB1AK53 854 aa10.36□□□□□ -0.75
TCF4-203ENST00000398339 KIF3BO15066 747 aa10.36□□□□□ -0.75
TCF4-203ENST00000398339 U2AF1L5P0DN76 240 aaPredicted RBP10.36□□□□□ -0.75
TCF4-203ENST00000398339 U2AF1Q01081 240 aaKnown RBP eCLIP10.36□□□□□ -0.75
TCF4-203ENST00000398339 ITPRIPQ8IWB1 547 aa10.36□□□□□ -0.75
TCF4-203ENST00000398339 TSR2Q969E8 191 aaKnown RBP10.36□□□□□ -0.75
TCF4-203ENST00000398339 ERCC6L2Q5T890 1561 aa10.36□□□□□ -0.75
TCF4-203ENST00000398339 EXOSC9Q06265 439 aaKnown RBP10.35□□□□□ -0.75
TCF4-203ENST00000398339 BCCIPQ9P287 314 aaKnown RBP eCLIP10.35□□□□□ -0.75
TCF4-203ENST00000398339 CIZ1Q9ULV3 898 aaPredicted RBP10.35□□□□□ -0.75
TCF4-203ENST00000398339 KIF1BO60333 1816 aa10.35□□□□□ -0.75
TCF4-203ENST00000398339 ZCCHC11Q5TAX3 1644 aaKnown RBP10.35□□□□□ -0.75
TCF4-203ENST00000398339 ATF7IPQ6VMQ6 1270 aa10.35□□□□□ -0.75
TCF4-203ENST00000398339 SSH1Q8WYL5 1049 aa10.35□□□□□ -0.75
TCF4-203ENST00000398339 TNPO1Q92973 898 aaKnown RBP10.35□□□□□ -0.75
TCF4-203ENST00000398339 TAOK2Q9UL54 1235 aa10.35□□□□□ -0.75
TCF4-203ENST00000398339 TRAK1Q9UPV9 953 aa10.35□□□□□ -0.75
TCF4-203ENST00000398339 MROH2AA6NES4 1674 aa10.35□□□□□ -0.75
TCF4-203ENST00000398339 ZC3H13Q5T200 1668 aaKnown RBP10.35□□□□□ -0.75
TCF4-203ENST00000398339 ATP7AQ04656 1500 aa10.35□□□□□ -0.75
TCF4-203ENST00000398339 ARAP3Q8WWN8 1544 aa10.35□□□□□ -0.75
TCF4-203ENST00000398339 NOS1P29475 1434 aa10.34□□□□□ -0.75
TCF4-203ENST00000398339 ERBB4Q15303 1308 aa10.34□□□□□ -0.75
TCF4-203ENST00000398339 CALD1Q05682 793 aaKnown RBP10.34□□□□□ -0.75
TCF4-203ENST00000398339 MROH1Q8NDA8 1641 aa10.34□□□□□ -0.75
TCF4-203ENST00000398339 INO80Q9ULG1 1556 aaPredicted RBP10.34□□□□□ -0.75
TCF4-203ENST00000398339 NSD2O96028 1365 aa10.34□□□□□ -0.75
TCF4-203ENST00000398339 NUCB1Q02818 461 aa10.33□□□□□ -0.76
TCF4-203ENST00000398339 RAB3GAP1Q15042 981 aa10.33□□□□□ -0.76
TCF4-203ENST00000398339 GBP4Q96PP9 640 aa10.33□□□□□ -0.76
TCF4-203ENST00000398339 ZBTB40Q9NUA8 1239 aa10.33□□□□□ -0.76
TCF4-203ENST00000398339 NOB1Q9ULX3 412 aaKnown RBP10.33□□□□□ -0.76
TCF4-203ENST00000398339 QRICH2Q9H0J4 1663 aa10.33□□□□□ -0.76
TCF4-203ENST00000398339 SKOR2Q2VWA4 1001 aaPredicted RBP10.33□□□□□ -0.76
TCF4-203ENST00000398339 GAS2L3Q86XJ1 694 aa10.33□□□□□ -0.76
TCF4-203ENST00000398339 TMEM57Q8N5G2 664 aa10.33□□□□□ -0.76
TCF4-203ENST00000398339 EFCAB6Q5THR3 1501 aa10.33□□□□□ -0.76
TCF4-203ENST00000398339 CHD1O14646 1710 aa10.33□□□□□ -0.76
TCF4-203ENST00000398339 HSP90AB1P08238 724 aaKnown RBP10.32□□□□□ -0.76
TCF4-203ENST00000398339 TEX2Q8IWB9 1127 aa10.32□□□□□ -0.76
TCF4-203ENST00000398339 C14orf93Q9H972 538 aaKnown RBP10.32□□□□□ -0.76
TCF4-203ENST00000398339 CD109Q6YHK3 1445 aa10.32□□□□□ -0.76
TCF4-203ENST00000398339 ADGRB3O60242 1522 aa10.32□□□□□ -0.76
TCF4-203ENST00000398339 UHRF1BP1LA0JNW5 1464 aa10.32□□□□□ -0.76
TCF4-203ENST00000398339 PTMSP20962 102 aa10.32□□□□□ -0.76
TCF4-203ENST00000398339 TRIM44Q96DX7 344 aaPredicted RBP10.32□□□□□ -0.76
TCF4-203ENST00000398339 PLEKHF1Q96S99 279 aa10.32□□□□□ -0.76
TCF4-203ENST00000398339 TRIM35Q9UPQ4 493 aa10.32□□□□□ -0.76
TCF4-203ENST00000398339 ADGRB1O14514 1584 aa10.32□□□□□ -0.76
TCF4-203ENST00000398339 TMPOP42166 694 aaKnown RBP10.31□□□□□ -0.76
TCF4-203ENST00000398339 ANKRD36BQ8N2N9 1353 aa10.31□□□□□ -0.76
TCF4-203ENST00000398339 FANCAO15360 1455 aa10.31□□□□□ -0.76
TCF4-203ENST00000398339 IL16Q14005 1332 aa10.31□□□□□ -0.76
TCF4-203ENST00000398339 CHRM1P11229 460 aaPredicted RBP10.31□□□□□ -0.76
TCF4-203ENST00000398339 PUS7Q96PZ0 661 aaKnown RBP10.31□□□□□ -0.76
TCF4-203ENST00000398339 ABCC11Q96J66 1382 aa10.31□□□□□ -0.76
TCF4-203ENST00000398339 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.3□□□□□ -0.76
TCF4-203ENST00000398339 CHD1LQ86WJ1 897 aa10.3□□□□□ -0.76
TCF4-203ENST00000398339 KIF2CQ99661 725 aa10.3□□□□□ -0.76
TCF4-203ENST00000398339 LNPKQ9C0E8 428 aa10.3□□□□□ -0.76
TCF4-203ENST00000398339 KIF16BQ96L93 1317 aa10.3□□□□□ -0.76
TCF4-203ENST00000398339 IPO8O15397 1037 aaKnown RBP10.3□□□□□ -0.76
TCF4-203ENST00000398339 BMP2KLQ5H9B9 411 aa10.3□□□□□ -0.76
TCF4-203ENST00000398339 SECISBP2LQ93073 1101 aaKnown RBP10.3□□□□□ -0.76
TCF4-203ENST00000398339 PPRC1Q5VV67 1664 aaKnown RBP10.3□□□□□ -0.76
TCF4-203ENST00000398339 CHGAP10645 457 aaKnown RBP10.29□□□□□ -0.76
TCF4-203ENST00000398339 TMEM132EQ6IEE7 984 aa10.29□□□□□ -0.76
TCF4-203ENST00000398339 FBXO3Q9UK99 471 aa10.29□□□□□ -0.76
TCF4-203ENST00000398339 LMTK2Q8IWU2 1503 aa10.29□□□□□ -0.76
TCF4-203ENST00000398339 U2SURPO15042 1029 aaKnown RBP10.28□□□□□ -0.76
TCF4-203ENST00000398339 EVC2Q86UK5 1308 aa10.28□□□□□ -0.76
TCF4-203ENST00000398339 CFAP74Q9C0B2 1584 aa10.28□□□□□ -0.76
TCF4-203ENST00000398339 CD2BP2O95400 341 aaKnown RBP10.28□□□□□ -0.76
TCF4-203ENST00000398339 TPM2P07951 284 aa10.28□□□□□ -0.76
TCF4-203ENST00000398339 HSP90B1P14625 803 aaKnown RBP10.28□□□□□ -0.76
TCF4-203ENST00000398339 COL3A1P02461 1466 aaPredicted RBP10.28□□□□□ -0.76
TCF4-203ENST00000398339 TULP4Q9NRJ4 1543 aa10.27□□□□□ -0.76
TCF4-203ENST00000398339 K7ELQ4 463 aaPredicted RBP10.27□□□□□ -0.76
TCF4-203ENST00000398339 ALDH1L2Q3SY69 923 aa10.27□□□□□ -0.76
TCF4-203ENST00000398339 CCDC173Q0VFZ6 552 aa10.27□□□□□ -0.77
TCF4-203ENST00000398339 PPP1R9BQ96SB3 815 aa10.27□□□□□ -0.77
TCF4-203ENST00000398339 FOXD4L1Q9NU39 408 aa10.27□□□□□ -0.77
TCF4-203ENST00000398339 PPLO60437 1756 aa10.27□□□□□ -0.77
TCF4-203ENST00000398339 RIMBP3CA6NJZ7 1639 aa10.27□□□□□ -0.77
TCF4-203ENST00000398339 RIMBP3BA6NNM3 1639 aa10.27□□□□□ -0.77
TCF4-203ENST00000398339 ABCA9Q8IUA7 1624 aa10.27□□□□□ -0.77
TCF4-203ENST00000398339 RIMBP3Q9UFD9 1639 aa10.27□□□□□ -0.77
TCF4-203ENST00000398339 RIPK4P57078 832 aa10.26□□□□□ -0.77
TCF4-203ENST00000398339 CLEC17AQ6ZS10 378 aa10.26□□□□□ -0.77
TCF4-203ENST00000398339 CDK11BP21127 795 aaKnown RBP10.26□□□□□ -0.77
TCF4-203ENST00000398339 SSFA2P28290 1259 aa10.26□□□□□ -0.77
TCF4-203ENST00000398339 RPGRIP1LQ68CZ1 1315 aa10.26□□□□□ -0.77
TCF4-203ENST00000398339 MED14O60244 1454 aa10.26□□□□□ -0.77
TCF4-203ENST00000398339 ANKRD45Q5TZF3 282 aa10.25□□□□□ -0.77
TCF4-203ENST00000398339 TBC1D9Q6ZT07 1266 aa10.25□□□□□ -0.77
TCF4-203ENST00000398339 GCC1Q96CN9 775 aa10.25□□□□□ -0.77
TCF4-203ENST00000398339 IBTKQ9P2D0 1353 aaPredicted RBP10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms