RNA–Protein interactions for RNA: ENST00000398020.6

TMEM55B-202, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-202ENST00000398020 NUTM2AQ8IVF1 878 aaPredicted RBP35.29■■■■□ 3.24
TMEM55B-202ENST00000398020 ZNF692Q9BU19 519 aaPredicted RBP35.29■■■■□ 3.24
TMEM55B-202ENST00000398020 MYOM1P52179 1685 aa35.29■■■■□ 3.24
TMEM55B-202ENST00000398020 A0A1W2PP64 1363 aa35.28■■■■□ 3.24
TMEM55B-202ENST00000398020 HDGFL2Q7Z4V5 671 aaPredicted RBP35.27■■■■□ 3.24
TMEM55B-202ENST00000398020 SPATA31A6Q5VVP1 1343 aa35.27■■■■□ 3.24
TMEM55B-202ENST00000398020 COL22A1Q8NFW1 1626 aaPredicted RBP35.27■■■■□ 3.24
TMEM55B-202ENST00000398020 TERF2IPQ9NYB0 399 aa35.27■■■■□ 3.24
TMEM55B-202ENST00000398020 ARHGEF10O15013 1369 aa35.26■■■■□ 3.23
TMEM55B-202ENST00000398020 MON2Q7Z3U7 1717 aa35.25■■■■□ 3.23
TMEM55B-202ENST00000398020 NUTM2GQ5VZR2 741 aa35.24■■■■□ 3.23
TMEM55B-202ENST00000398020 LRP6O75581 1613 aa35.24■■■■□ 3.23
TMEM55B-202ENST00000398020 SSH2Q76I76 1423 aa35.23■■■■□ 3.23
TMEM55B-202ENST00000398020 CABLES1Q8TDN4 633 aa35.23■■■■□ 3.23
TMEM55B-202ENST00000398020 KIF7Q2M1P5 1343 aa35.22■■■■□ 3.23
TMEM55B-202ENST00000398020 NRKQ7Z2Y5 1582 aa35.22■■■■□ 3.23
TMEM55B-202ENST00000398020 ABTB2Q8N961 1025 aa35.21■■■■□ 3.23
TMEM55B-202ENST00000398020 MED1Q15648 1581 aaPredicted RBP35.21■■■■□ 3.23
TMEM55B-202ENST00000398020 TTC21BQ7Z4L5 1316 aa35.2■■■■□ 3.23
TMEM55B-202ENST00000398020 ANKRD36BQ8N2N9 1353 aa35.2■■■■□ 3.23
TMEM55B-202ENST00000398020 BRD4O60885 1362 aaPredicted RBP35.19■■■■□ 3.22
TMEM55B-202ENST00000398020 SUGP2Q8IX01 1082 aaKnown RBP eCLIP35.19■■■■□ 3.22
TMEM55B-202ENST00000398020 PIK3C2AO00443 1686 aa35.15■■■■□ 3.22
TMEM55B-202ENST00000398020 ADAMTS2O95450 1211 aa35.15■■■■□ 3.22
TMEM55B-202ENST00000398020 EDC4Q6P2E9 1401 aaKnown RBP35.15■■■■□ 3.22
TMEM55B-202ENST00000398020 HAP1P54257 671 aaPredicted RBP35.14■■■■□ 3.22
TMEM55B-202ENST00000398020 ABCA3Q99758 1704 aa35.13■■■■□ 3.21
TMEM55B-202ENST00000398020 WASHC2AQ641Q2 1341 aa35.13■■■■□ 3.21
TMEM55B-202ENST00000398020 MEX3CQ5U5Q3 659 aaKnown RBP35.13■■■■□ 3.21
TMEM55B-202ENST00000398020 TTC21AQ8NDW8 1320 aa35.12■■■■□ 3.21
TMEM55B-202ENST00000398020 CCDC7Q96M83 1385 aa35.12■■■■□ 3.21
TMEM55B-202ENST00000398020 NLRP6P59044 892 aa35.11■■■■□ 3.21
TMEM55B-202ENST00000398020 NME9Q86XW9 330 aa35.1■■■■□ 3.21
TMEM55B-202ENST00000398020 CRYBG1Q9Y4K1 1723 aa35.1■■■■□ 3.21
TMEM55B-202ENST00000398020 CARD14Q9BXL6 1004 aa35.09■■■■□ 3.21
TMEM55B-202ENST00000398020 ZRANB1Q9UGI0 708 aa35.08■■■■□ 3.21
TMEM55B-202ENST00000398020 NLRP13Q86W25 1043 aa35.08■■■■□ 3.21
TMEM55B-202ENST00000398020 PHRF1Q9P1Y6 1649 aaKnown RBP35.06■■■■□ 3.2
TMEM55B-202ENST00000398020 PANK3Q9H999 370 aa35.05■■■■□ 3.2
TMEM55B-202ENST00000398020 NSD3Q9BZ95 1437 aa35.05■■■■□ 3.2
TMEM55B-202ENST00000398020 C8orf37Q96NL8 207 aa35.05■■■■□ 3.2
TMEM55B-202ENST00000398020 USP19O94966 1318 aa35.03■■■■□ 3.2
TMEM55B-202ENST00000398020 MARF1Q9Y4F3 1742 aaKnown RBP35.02■■■■□ 3.2
TMEM55B-202ENST00000398020 PHF23Q9BUL5 403 aaPredicted RBP35■■■■□ 3.19
TMEM55B-202ENST00000398020 SOX12O15370 315 aa34.98■■■■□ 3.19
TMEM55B-202ENST00000398020 GCP02774 474 aa34.98■■■■□ 3.19
TMEM55B-202ENST00000398020 NGLY1Q96IV0 654 aa34.98■■■■□ 3.19
TMEM55B-202ENST00000398020 ZC3H6P61129 1189 aaKnown RBP34.97■■■■□ 3.19
TMEM55B-202ENST00000398020 USP31Q70CQ4 1352 aa34.97■■■■□ 3.19
TMEM55B-202ENST00000398020 SLIT3O75094 1523 aa34.96■■■■□ 3.19
TMEM55B-202ENST00000398020 FYB1O15117 783 aa34.95■■■■□ 3.19
TMEM55B-202ENST00000398020 GGNBP2Q9H3C7 697 aa34.95■■■■□ 3.18
TMEM55B-202ENST00000398020 KIF20BQ96Q89 1820 aa34.93■■■■□ 3.18
TMEM55B-202ENST00000398020 USP54Q70EL1 1684 aa34.93■■■■□ 3.18
TMEM55B-202ENST00000398020 KIAA0232Q92628 1395 aa34.93■■■■□ 3.18
TMEM55B-202ENST00000398020 OVOS2A0A0J9YW53 1432 aa34.93■■■■□ 3.18
TMEM55B-202ENST00000398020 OVOS2Q6IE36 1432 aa34.93■■■■□ 3.18
TMEM55B-202ENST00000398020 AFF2P51816 1311 aa34.92■■■■□ 3.18
TMEM55B-202ENST00000398020 FAM83GA6ND36 823 aa34.92■■■■□ 3.18
TMEM55B-202ENST00000398020 COG3Q96JB2 828 aa34.9■■■■□ 3.18
TMEM55B-202ENST00000398020 PRDM11Q9NQV5 511 aa34.9■■■■□ 3.18
TMEM55B-202ENST00000398020 RGS17Q9UGC6 210 aaPredicted RBP34.9■■■■□ 3.18
TMEM55B-202ENST00000398020 CGNL1Q0VF96 1302 aa34.89■■■■□ 3.18
TMEM55B-202ENST00000398020 ZBTB7CA1YPR0 619 aa34.89■■■■□ 3.18
TMEM55B-202ENST00000398020 CHRNA2Q15822 529 aa34.89■■■■□ 3.18
TMEM55B-202ENST00000398020 KCNH5Q8NCM2 988 aa34.87■■■■□ 3.17
TMEM55B-202ENST00000398020 PLCH1Q4KWH8 1693 aa34.86■■■■□ 3.17
TMEM55B-202ENST00000398020 NFAT5O94916 1531 aa34.86■■■■□ 3.17
TMEM55B-202ENST00000398020 FNBP4Q8N3X1 1017 aaPredicted RBP34.85■■■■□ 3.17
TMEM55B-202ENST00000398020 KNSTRNQ9Y448 316 aa34.85■■■■□ 3.17
TMEM55B-202ENST00000398020 COL14A1Q05707 1796 aaKnown RBP34.83■■■■□ 3.17
TMEM55B-202ENST00000398020 CPDO75976 1380 aa34.83■■■■□ 3.17
TMEM55B-202ENST00000398020 USP21Q9UK80 565 aa34.83■■■■□ 3.17
TMEM55B-202ENST00000398020 SLIT2O94813 1529 aa34.82■■■■□ 3.16
TMEM55B-202ENST00000398020 FBLN1P23142 703 aa34.82■■■■□ 3.16
TMEM55B-202ENST00000398020 BTG4Q9NY30 223 aa34.8■■■■□ 3.16
TMEM55B-202ENST00000398020 BCL9LQ86UU0 1499 aa34.8■■■■□ 3.16
TMEM55B-202ENST00000398020 PER1O15534 1290 aaPredicted RBP34.79■■■■□ 3.16
TMEM55B-202ENST00000398020 ZNF772Q68DY9 489 aaPredicted RBP34.79■■■■□ 3.16
TMEM55B-202ENST00000398020 ARHGEF25Q86VW2 580 aa34.78■■■■□ 3.16
TMEM55B-202ENST00000398020 POTEAQ6S8J7 498 aa34.76■■■■□ 3.16
TMEM55B-202ENST00000398020 NWD2Q9ULI1 1742 aa34.76■■■■□ 3.15
TMEM55B-202ENST00000398020 LTN1O94822 1766 aa34.75■■■■□ 3.15
TMEM55B-202ENST00000398020 ANKRD26Q9UPS8 1709 aa34.74■■■■□ 3.15
TMEM55B-202ENST00000398020 AMER1Q5JTC6 1135 aaPredicted RBP34.74■■■■□ 3.15
TMEM55B-202ENST00000398020 UNC5CLQ8IV45 518 aa34.74■■■■□ 3.15
TMEM55B-202ENST00000398020 LMO7Q8WWI1 1683 aa34.74■■■■□ 3.15
TMEM55B-202ENST00000398020 CNGB1Q14028 1251 aaPredicted RBP34.73■■■■□ 3.15
TMEM55B-202ENST00000398020 CAMTA1Q9Y6Y1 1673 aa34.72■■■■□ 3.15
TMEM55B-202ENST00000398020 QTRT2Q9H974 415 aaKnown RBP34.72■■■■□ 3.15
TMEM55B-202ENST00000398020 NRAPQ86VF7 1730 aa34.71■■■■□ 3.15
TMEM55B-202ENST00000398020 AATKQ6ZMQ8 1374 aa34.71■■■■□ 3.15
TMEM55B-202ENST00000398020 TNNT2P45379 298 aaPredicted RBP34.71■■■■□ 3.15
TMEM55B-202ENST00000398020 NSD2O96028 1365 aa34.71■■■■□ 3.15
TMEM55B-202ENST00000398020 COL18A1P39060 1754 aa34.7■■■■□ 3.15
TMEM55B-202ENST00000398020 DDX10Q13206 875 aaKnown RBP34.7■■■■□ 3.15
TMEM55B-202ENST00000398020 RRS1Q15050 365 aaKnown RBP34.7■■■■□ 3.15
TMEM55B-202ENST00000398020 AXIN2Q9Y2T1 843 aa34.7■■■■□ 3.15
TMEM55B-202ENST00000398020 TNKS1BP1Q9C0C2 1729 aaKnown RBP34.7■■■■□ 3.15
TMEM55B-202ENST00000398020 STRN4Q9NRL3 753 aa34.7■■■■□ 3.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms