RNA–Protein interactions for RNA: ENST00000397559.3

PDZD2-201, Transcript of PDZ domain containing 2, humanhuman

TSL 1 (best)

Gene PDZD2, Length 900 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD2-201ENST00000397559 LRRN4Q8WUT4 740 aa11.72□□□□□ -0.53
PDZD2-201ENST00000397559 FOXC1Q12948 553 aa11.71□□□□□ -0.53
PDZD2-201ENST00000397559 IRX2Q9BZI1 471 aaPredicted RBP11.71□□□□□ -0.53
PDZD2-201ENST00000397559 USP17L8P0C7I0 530 aa11.69□□□□□ -0.54
PDZD2-201ENST00000397559 LINC01559Q495D7 138 aa11.69□□□□□ -0.54
PDZD2-201ENST00000397559 ERICH6Q7L0X2 663 aa11.69□□□□□ -0.54
PDZD2-201ENST00000397559 TNFRSF10AO00220 468 aa11.68□□□□□ -0.54
PDZD2-201ENST00000397559 TMEM259Q4ZIN3 620 aa11.68□□□□□ -0.54
PDZD2-201ENST00000397559 TRIM67Q6ZTA4 783 aa11.68□□□□□ -0.54
PDZD2-201ENST00000397559 BAP1Q92560 729 aa11.68□□□□□ -0.54
PDZD2-201ENST00000397559 PDZRN3Q9UPQ7 1066 aa11.68□□□□□ -0.54
PDZD2-201ENST00000397559 CUX2O14529 1486 aa11.68□□□□□ -0.54
PDZD2-201ENST00000397559 GFRA3O60609 400 aa11.67□□□□□ -0.54
PDZD2-201ENST00000397559 SKOR1P84550 965 aa11.67□□□□□ -0.54
PDZD2-201ENST00000397559 PKD2L1Q9P0L9 805 aa11.66□□□□□ -0.54
PDZD2-201ENST00000397559 GDF9O60383 454 aa11.65□□□□□ -0.54
PDZD2-201ENST00000397559 WNT7BP56706 349 aa11.65□□□□□ -0.54
PDZD2-201ENST00000397559 SH3BP2P78314 561 aa11.64□□□□□ -0.55
PDZD2-201ENST00000397559 NR6A1Q15406 480 aa11.64□□□□□ -0.55
PDZD2-201ENST00000397559 HMX1Q9NP08 348 aaPredicted RBP11.64□□□□□ -0.55
PDZD2-201ENST00000397559 RC3H1Q5TC82 1133 aaKnown RBP11.63□□□□□ -0.55
PDZD2-201ENST00000397559 ZNF511Q8NB15 262 aa11.63□□□□□ -0.55
PDZD2-201ENST00000397559 WNT7AO00755 349 aa11.62□□□□□ -0.55
PDZD2-201ENST00000397559 PRR20EP86478 221 aa11.62□□□□□ -0.55
PDZD2-201ENST00000397559 PRR20CP86479 221 aa11.62□□□□□ -0.55
PDZD2-201ENST00000397559 PRR20DP86480 221 aa11.62□□□□□ -0.55
PDZD2-201ENST00000397559 PRR20BP86481 221 aa11.62□□□□□ -0.55
PDZD2-201ENST00000397559 PRR20AP86496 221 aa11.62□□□□□ -0.55
PDZD2-201ENST00000397559 ARMC2Q8NEN0 867 aa11.61□□□□□ -0.55
PDZD2-201ENST00000397559 MRGPRX2Q96LB1 330 aa11.61□□□□□ -0.55
PDZD2-201ENST00000397559 NRG2O14511 850 aaPredicted RBP11.6□□□□□ -0.55
PDZD2-201ENST00000397559 EHBP1Q8NDI1 1231 aa11.6□□□□□ -0.55
PDZD2-201ENST00000397559 EPS8L1Q8TE68 723 aa11.6□□□□□ -0.55
PDZD2-201ENST00000397559 LAPTM4AQ15012 233 aa11.59□□□□□ -0.55
PDZD2-201ENST00000397559 CYP4X1Q8N118 509 aa11.58□□□□□ -0.56
PDZD2-201ENST00000397559 BANK1Q8NDB2 785 aa11.58□□□□□ -0.56
PDZD2-201ENST00000397559 FOXJ1Q92949 421 aa11.58□□□□□ -0.56
PDZD2-201ENST00000397559 AGERQ15109 404 aa11.57□□□□□ -0.56
PDZD2-201ENST00000397559 NBPF14Q5TI25 921 aa11.57□□□□□ -0.56
PDZD2-201ENST00000397559 TIMELESSQ9UNS1 1208 aa11.57□□□□□ -0.56
PDZD2-201ENST00000397559 SNRKQ9NRH2 765 aa11.56□□□□□ -0.56
PDZD2-201ENST00000397559 FKBPLQ9UIM3 349 aa11.56□□□□□ -0.56
PDZD2-201ENST00000397559 TTC24A2A3L6 582 aaPredicted RBP11.55□□□□□ -0.56
PDZD2-201ENST00000397559 TRIM34Q9BYJ4 488 aa11.55□□□□□ -0.56
PDZD2-201ENST00000397559 Q6ZNB5 142 aa11.54□□□□□ -0.56
PDZD2-201ENST00000397559 TOR4AQ9NXH8 423 aa11.54□□□□□ -0.56
PDZD2-201ENST00000397559 FAM187AA6NFU0 413 aa11.53□□□□□ -0.56
PDZD2-201ENST00000397559 C14orf37Q86TY3 774 aa11.53□□□□□ -0.56
PDZD2-201ENST00000397559 BPHLQ86WA6 291 aaPredicted RBP11.53□□□□□ -0.56
PDZD2-201ENST00000397559 MTMR14Q8NCE2 650 aa11.53□□□□□ -0.56
PDZD2-201ENST00000397559 PNMA1Q8ND90 353 aa11.53□□□□□ -0.56
PDZD2-201ENST00000397559 SNIP1Q8TAD8 396 aaKnown RBP11.53□□□□□ -0.56
PDZD2-201ENST00000397559 GPKOWQ92917 476 aaPredicted RBP eCLIP11.53□□□□□ -0.56
PDZD2-201ENST00000397559 GJD4Q96KN9 370 aaPredicted RBP11.53□□□□□ -0.56
PDZD2-201ENST00000397559 MAGEB6P1A0A0J9YX57 407 aa11.52□□□□□ -0.57
PDZD2-201ENST00000397559 VARSP26640 1264 aaKnown RBP11.52□□□□□ -0.57
PDZD2-201ENST00000397559 C4orf48Q5BLP8 95 aa11.52□□□□□ -0.57
PDZD2-201ENST00000397559 NCAPD3P42695 1498 aa11.51□□□□□ -0.57
PDZD2-201ENST00000397559 CARD14Q9BXL6 1004 aa11.51□□□□□ -0.57
PDZD2-201ENST00000397559 SIAH2O43255 324 aa11.5□□□□□ -0.57
PDZD2-201ENST00000397559 ALDH1A1P00352 501 aa11.5□□□□□ -0.57
PDZD2-201ENST00000397559 PKDCCQ504Y2 493 aa11.5□□□□□ -0.57
PDZD2-201ENST00000397559 PDXDC2PQ6P474 469 aa11.5□□□□□ -0.57
PDZD2-201ENST00000397559 SH3BP5LQ7L8J4 393 aa11.5□□□□□ -0.57
PDZD2-201ENST00000397559 TLL2Q9Y6L7 1015 aa11.5□□□□□ -0.57
PDZD2-201ENST00000397559 ZC3H4Q9UPT8 1303 aaKnown RBP11.5□□□□□ -0.57
PDZD2-201ENST00000397559 ERCC6Q03468 1493 aa11.5□□□□□ -0.57
PDZD2-201ENST00000397559 J3QL48 77 aa11.49□□□□□ -0.57
PDZD2-201ENST00000397559 FAM174AQ8TBP5 190 aa11.49□□□□□ -0.57
PDZD2-201ENST00000397559 ARHGAP9Q9BRR9 750 aa11.49□□□□□ -0.57
PDZD2-201ENST00000397559 SH3RF1Q7Z6J0 888 aa11.48□□□□□ -0.57
PDZD2-201ENST00000397559 APBB1O00213 710 aa11.47□□□□□ -0.57
PDZD2-201ENST00000397559 DGAT1O75907 488 aa11.47□□□□□ -0.57
PDZD2-201ENST00000397559 ARID5BQ14865 1188 aa11.47□□□□□ -0.57
PDZD2-201ENST00000397559 SMPD1P17405 629 aa11.46□□□□□ -0.57
PDZD2-201ENST00000397559 PTK2Q05397 1052 aa11.46□□□□□ -0.57
PDZD2-201ENST00000397559 NDUFB9Q9Y6M9 179 aa11.46□□□□□ -0.57
PDZD2-201ENST00000397559 SOCS7O14512 581 aa11.45□□□□□ -0.58
PDZD2-201ENST00000397559 ZBTB33Q86T24 672 aa11.45□□□□□ -0.58
PDZD2-201ENST00000397559 HMGXB3Q12766 1538 aa11.45□□□□□ -0.58
PDZD2-201ENST00000397559 MCM6Q14566 821 aa11.44□□□□□ -0.58
PDZD2-201ENST00000397559 WASF2Q9Y6W5 498 aa11.44□□□□□ -0.58
PDZD2-201ENST00000397559 ERFEQ4G0M1 354 aa11.43□□□□□ -0.58
PDZD2-201ENST00000397559 OCSTAMPQ9BR26 566 aa11.43□□□□□ -0.58
PDZD2-201ENST00000397559 C1QTNF2Q9BXJ5 285 aa11.43□□□□□ -0.58
PDZD2-201ENST00000397559 TBC1D2BQ9UPU7 963 aa11.42□□□□□ -0.58
PDZD2-201ENST00000397559 GPSM3Q9Y4H4 160 aa11.42□□□□□ -0.58
PDZD2-201ENST00000397559 MPNDQ8N594 471 aa11.41□□□□□ -0.58
PDZD2-201ENST00000397559 ADAM32Q8TC27 787 aa11.41□□□□□ -0.58
PDZD2-201ENST00000397559 HPS1Q92902 700 aa11.41□□□□□ -0.58
PDZD2-201ENST00000397559 SMARCA2P51531 1590 aa11.41□□□□□ -0.58
PDZD2-201ENST00000397559 MYT1Q01538 1121 aa11.4□□□□□ -0.58
PDZD2-201ENST00000397559 TRAF7Q6Q0C0 670 aa11.4□□□□□ -0.58
PDZD2-201ENST00000397559 PRM3Q9NNZ6 103 aa11.4□□□□□ -0.58
PDZD2-201ENST00000397559 ATAD2BQ9ULI0 1458 aa11.39□□□□□ -0.59
PDZD2-201ENST00000397559 LCE2BO14633 110 aa11.39□□□□□ -0.59
PDZD2-201ENST00000397559 GPR37L1O60883 481 aa11.39□□□□□ -0.59
PDZD2-201ENST00000397559 TRMT44Q8IYL2 757 aaKnown RBP11.39□□□□□ -0.59
PDZD2-201ENST00000397559 SLC10A4Q96EP9 437 aa11.39□□□□□ -0.59
PDZD2-201ENST00000397559 CDK15Q96Q40 435 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms