RNA–Protein interactions for RNA: ENST00000397459.6

CNTN4-201, Transcript of contactin 4, humanhuman

TSL 1 (best) BASIC

Gene CNTN4, Length 2,322 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN4-201ENST00000397459 HDAC1Q13547 482 aaPredicted RBP10.34□□□□□ -0.75
CNTN4-201ENST00000397459 MVPQ14764 893 aaKnown RBP10.34□□□□□ -0.75
CNTN4-201ENST00000397459 FAM43AQ8N2R8 423 aa10.34□□□□□ -0.75
CNTN4-201ENST00000397459 SENP3Q9H4L4 574 aaPredicted RBP10.34□□□□□ -0.75
CNTN4-201ENST00000397459 KIF16BQ96L93 1317 aa10.33□□□□□ -0.76
CNTN4-201ENST00000397459 FRAT1Q92837 279 aaPredicted RBP10.33□□□□□ -0.76
CNTN4-201ENST00000397459 ESF1Q9H501 851 aaKnown RBP10.33□□□□□ -0.76
CNTN4-201ENST00000397459 STAG3Q9UJ98 1225 aa10.33□□□□□ -0.76
CNTN4-201ENST00000397459 DDX19BQ9UMR2 479 aa10.33□□□□□ -0.76
CNTN4-201ENST00000397459 COG6Q9Y2V7 657 aa10.33□□□□□ -0.76
CNTN4-201ENST00000397459 IPO8O15397 1037 aaKnown RBP10.32□□□□□ -0.76
CNTN4-201ENST00000397459 CDC42BPGQ6DT37 1551 aa10.32□□□□□ -0.76
CNTN4-201ENST00000397459 DZIP1LQ8IYY4 767 aaKnown RBP10.32□□□□□ -0.76
CNTN4-201ENST00000397459 A2ML1A8K2U0 1454 aa10.31□□□□□ -0.76
CNTN4-201ENST00000397459 TULP4Q9NRJ4 1543 aa10.31□□□□□ -0.76
CNTN4-201ENST00000397459 BRPF1P55201 1214 aaPredicted RBP10.31□□□□□ -0.76
CNTN4-201ENST00000397459 PANK1Q8TE04 598 aa10.31□□□□□ -0.76
CNTN4-201ENST00000397459 MTHFSP49914 203 aa10.3□□□□□ -0.76
CNTN4-201ENST00000397459 ALDH1L2Q3SY69 923 aa10.3□□□□□ -0.76
CNTN4-201ENST00000397459 FTSJ3Q8IY81 847 aaKnown RBP10.3□□□□□ -0.76
CNTN4-201ENST00000397459 CALD1Q05682 793 aaKnown RBP10.3□□□□□ -0.76
CNTN4-201ENST00000397459 PDZRN3Q9UPQ7 1066 aa10.3□□□□□ -0.76
CNTN4-201ENST00000397459 PPIP5K1Q6PFW1 1433 aa10.29□□□□□ -0.76
CNTN4-201ENST00000397459 FRAT2O75474 233 aaPredicted RBP10.29□□□□□ -0.76
CNTN4-201ENST00000397459 TERF2IPQ9NYB0 399 aa10.29□□□□□ -0.76
CNTN4-201ENST00000397459 IL27Q8NEV9 243 aa10.29□□□□□ -0.76
CNTN4-201ENST00000397459 RSPH6AQ9H0K4 717 aa10.29□□□□□ -0.76
CNTN4-201ENST00000397459 ANTXR1Q9H6X2 564 aa10.29□□□□□ -0.76
CNTN4-201ENST00000397459 COL3A1P02461 1466 aaPredicted RBP10.29□□□□□ -0.76
CNTN4-201ENST00000397459 CHMP5Q9NZZ3 219 aa10.28□□□□□ -0.76
CNTN4-201ENST00000397459 STK26Q9P289 416 aa10.28□□□□□ -0.76
CNTN4-201ENST00000397459 CIZ1Q9ULV3 898 aaPredicted RBP10.28□□□□□ -0.76
CNTN4-201ENST00000397459 DMRT2Q9Y5R5 561 aa10.28□□□□□ -0.76
CNTN4-201ENST00000397459 RIMS2Q9UQ26 1411 aa10.28□□□□□ -0.76
CNTN4-201ENST00000397459 SKAP1Q86WV1 359 aa10.28□□□□□ -0.76
CNTN4-201ENST00000397459 SLC12A5Q9H2X9 1139 aa10.28□□□□□ -0.76
CNTN4-201ENST00000397459 ALKQ9UM73 1620 aa10.27□□□□□ -0.76
CNTN4-201ENST00000397459 TNRQ92752 1358 aa10.27□□□□□ -0.77
CNTN4-201ENST00000397459 DDX11L8A8MPP1 907 aa10.27□□□□□ -0.77
CNTN4-201ENST00000397459 SLC4A3P48751 1232 aa10.27□□□□□ -0.77
CNTN4-201ENST00000397459 SMC5Q8IY18 1101 aa10.27□□□□□ -0.77
CNTN4-201ENST00000397459 PCDHB15Q9Y5E8 787 aa10.27□□□□□ -0.77
CNTN4-201ENST00000397459 PNPLA6Q8IY17 1366 aa10.27□□□□□ -0.77
CNTN4-201ENST00000397459 U2AF1L5P0DN76 240 aaPredicted RBP10.27□□□□□ -0.77
CNTN4-201ENST00000397459 U2AF1Q01081 240 aaKnown RBP eCLIP10.27□□□□□ -0.77
CNTN4-201ENST00000397459 DLC1Q96QB1 1528 aa10.27□□□□□ -0.77
CNTN4-201ENST00000397459 ATF7IPQ6VMQ6 1270 aa10.26□□□□□ -0.77
CNTN4-201ENST00000397459 SNX21Q969T3 373 aa10.26□□□□□ -0.77
CNTN4-201ENST00000397459 YTHDC2Q9H6S0 1430 aaKnown RBP10.26□□□□□ -0.77
CNTN4-201ENST00000397459 SAFB2Q14151 953 aaKnown RBP eCLIP10.25□□□□□ -0.77
CNTN4-201ENST00000397459 ARHGAP45Q92619 1136 aa10.25□□□□□ -0.77
CNTN4-201ENST00000397459 KIF24Q5T7B8 1368 aa10.25□□□□□ -0.77
CNTN4-201ENST00000397459 TMPOP42166 694 aaKnown RBP10.25□□□□□ -0.77
CNTN4-201ENST00000397459 CEBPAP49715 358 aaPredicted RBP10.25□□□□□ -0.77
CNTN4-201ENST00000397459 HSCBQ8IWL3 235 aa10.25□□□□□ -0.77
CNTN4-201ENST00000397459 SMC4Q9NTJ3 1288 aa10.25□□□□□ -0.77
CNTN4-201ENST00000397459 PTPRMP28827 1452 aa10.25□□□□□ -0.77
CNTN4-201ENST00000397459 HAP1P54257 671 aaPredicted RBP10.24□□□□□ -0.77
CNTN4-201ENST00000397459 HDGFL2Q7Z4V5 671 aaPredicted RBP10.24□□□□□ -0.77
CNTN4-201ENST00000397459 PLEKHF1Q96S99 279 aa10.24□□□□□ -0.77
CNTN4-201ENST00000397459 TBC1D2Q9BYX2 928 aa10.24□□□□□ -0.77
CNTN4-201ENST00000397459 C22orf23Q9BZE7 217 aa10.24□□□□□ -0.77
CNTN4-201ENST00000397459 ATP7BP35670 1465 aa10.24□□□□□ -0.77
CNTN4-201ENST00000397459 KIF20BQ96Q89 1820 aa10.24□□□□□ -0.77
CNTN4-201ENST00000397459 FCHSD2O94868 740 aa10.24□□□□□ -0.77
CNTN4-201ENST00000397459 RLBP1P12271 317 aa10.24□□□□□ -0.77
CNTN4-201ENST00000397459 RBM25P49756 843 aaKnown RBP10.24□□□□□ -0.77
CNTN4-201ENST00000397459 GCC1Q96CN9 775 aa10.24□□□□□ -0.77
CNTN4-201ENST00000397459 PRAM1Q96QH2 718 aa10.24□□□□□ -0.77
CNTN4-201ENST00000397459 PIK3R4Q99570 1358 aa10.24□□□□□ -0.77
CNTN4-201ENST00000397459 NCOA3Q9Y6Q9 1424 aa10.24□□□□□ -0.77
CNTN4-201ENST00000397459 SKOR2Q2VWA4 1001 aaPredicted RBP10.23□□□□□ -0.77
CNTN4-201ENST00000397459 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.23□□□□□ -0.77
CNTN4-201ENST00000397459 BRPF3Q9ULD4 1205 aa10.23□□□□□ -0.77
CNTN4-201ENST00000397459 A0A1W2PP64 1363 aa10.23□□□□□ -0.77
CNTN4-201ENST00000397459 SETD1AO15047 1707 aaKnown RBP10.23□□□□□ -0.77
CNTN4-201ENST00000397459 DNAJC5Q9H3Z4 198 aa10.23□□□□□ -0.77
CNTN4-201ENST00000397459 UBR1Q8IWV7 1749 aa10.23□□□□□ -0.77
CNTN4-201ENST00000397459 NRXN3Q9Y4C0 1643 aa10.22□□□□□ -0.77
CNTN4-201ENST00000397459 GOLGA6L3A6NEY3 463 aa10.22□□□□□ -0.77
CNTN4-201ENST00000397459 MCM4P33991 863 aa10.22□□□□□ -0.77
CNTN4-201ENST00000397459 LMOD3Q0VAK6 560 aa10.22□□□□□ -0.77
CNTN4-201ENST00000397459 CABP2Q9NPB3 220 aa10.22□□□□□ -0.77
CNTN4-201ENST00000397459 DIAPH1O60610 1272 aaKnown RBP10.22□□□□□ -0.77
CNTN4-201ENST00000397459 NEUROD2Q15784 382 aa10.22□□□□□ -0.77
CNTN4-201ENST00000397459 POGKQ9P215 609 aa10.22□□□□□ -0.77
CNTN4-201ENST00000397459 C3P01024 1663 aa10.21□□□□□ -0.77
CNTN4-201ENST00000397459 FSD2A1L4K1 749 aa10.21□□□□□ -0.77
CNTN4-201ENST00000397459 SEC24BO95487 1268 aa10.21□□□□□ -0.77
CNTN4-201ENST00000397459 TRIM27P14373 513 aa10.21□□□□□ -0.77
CNTN4-201ENST00000397459 MRE11P49959 708 aa10.21□□□□□ -0.77
CNTN4-201ENST00000397459 BMP2KLQ5H9B9 411 aa10.21□□□□□ -0.77
CNTN4-201ENST00000397459 ZBTB40Q9NUA8 1239 aa10.21□□□□□ -0.77
CNTN4-201ENST00000397459 RRP7AQ9Y3A4 280 aaKnown RBP10.21□□□□□ -0.77
CNTN4-201ENST00000397459 MINK1Q8N4C8 1332 aaPredicted RBP10.21□□□□□ -0.77
CNTN4-201ENST00000397459 TMEM2Q9UHN6 1383 aa10.21□□□□□ -0.77
CNTN4-201ENST00000397459 PTCH1Q13635 1447 aa10.21□□□□□ -0.77
CNTN4-201ENST00000397459 FER1L4A9Z1Z3 1794 aa10.21□□□□□ -0.78
CNTN4-201ENST00000397459 HDGFP51858 240 aaKnown RBP10.21□□□□□ -0.78
CNTN4-201ENST00000397459 NUCB1Q02818 461 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms