RNA–Protein interactions for RNA: ENST00000396735.6

PPM1N-201, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1N (putative), humanhuman

TSL 1 (best) BASIC

Gene PPM1N, Length 895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1N-201ENST00000396735 NRAPQ86VF7 1730 aa19.74■□□□□ 0.75
PPM1N-201ENST00000396735 FAM83GA6ND36 823 aa19.74■□□□□ 0.75
PPM1N-201ENST00000396735 PAK3O75914 559 aaPredicted RBP19.74■□□□□ 0.75
PPM1N-201ENST00000396735 UNC5CLQ8IV45 518 aa19.74■□□□□ 0.75
PPM1N-201ENST00000396735 CABP2Q9NPB3 220 aa19.74■□□□□ 0.75
PPM1N-201ENST00000396735 RALGAPBQ86X10 1494 aa19.73■□□□□ 0.75
PPM1N-201ENST00000396735 PHRF1Q9P1Y6 1649 aaKnown RBP19.73■□□□□ 0.75
PPM1N-201ENST00000396735 POLR3AO14802 1390 aaPredicted RBP19.73■□□□□ 0.75
PPM1N-201ENST00000396735 ROCK2O75116 1388 aaKnown RBP19.72■□□□□ 0.75
PPM1N-201ENST00000396735 GJD4Q96KN9 370 aaPredicted RBP19.72■□□□□ 0.75
PPM1N-201ENST00000396735 CCDC61Q9Y6R9 512 aa19.72■□□□□ 0.75
PPM1N-201ENST00000396735 PLEKHG3A1L390 1219 aa19.71■□□□□ 0.75
PPM1N-201ENST00000396735 SRPK2P78362 688 aaKnown RBP19.71■□□□□ 0.75
PPM1N-201ENST00000396735 NUTM2GQ5VZR2 741 aa19.71■□□□□ 0.75
PPM1N-201ENST00000396735 PPIP5K1Q6PFW1 1433 aa19.7■□□□□ 0.74
PPM1N-201ENST00000396735 BRWD3Q6RI45 1802 aa19.7■□□□□ 0.74
PPM1N-201ENST00000396735 COL14A1Q05707 1796 aaKnown RBP19.7■□□□□ 0.74
PPM1N-201ENST00000396735 EP400Q96L91 3159 aa19.67■□□□□ 0.74
PPM1N-201ENST00000396735 VPS72Q15906 364 aa19.65■□□□□ 0.74
PPM1N-201ENST00000396735 CABP1Q9NZU7 370 aa19.65■□□□□ 0.74
PPM1N-201ENST00000396735 NRKQ7Z2Y5 1582 aa19.65■□□□□ 0.74
PPM1N-201ENST00000396735 BTG4Q9NY30 223 aa19.64■□□□□ 0.73
PPM1N-201ENST00000396735 TONSLQ96HA7 1378 aa19.64■□□□□ 0.73
PPM1N-201ENST00000396735 ATAD2Q6PL18 1390 aa19.63■□□□□ 0.73
PPM1N-201ENST00000396735 KIAA0232Q92628 1395 aa19.63■□□□□ 0.73
PPM1N-201ENST00000396735 CHRNA2Q15822 529 aa19.63■□□□□ 0.73
PPM1N-201ENST00000396735 CCDC9Q9Y3X0 531 aaKnown RBP19.62■□□□□ 0.73
PPM1N-201ENST00000396735 USP6P35125 1406 aa19.61■□□□□ 0.73
PPM1N-201ENST00000396735 EVC2Q86UK5 1308 aa19.61■□□□□ 0.73
PPM1N-201ENST00000396735 ZC3H6P61129 1189 aaKnown RBP19.61■□□□□ 0.73
PPM1N-201ENST00000396735 PIAS4Q8N2W9 510 aaPredicted RBP19.61■□□□□ 0.73
PPM1N-201ENST00000396735 AKAP12Q02952 1782 aa19.61■□□□□ 0.73
PPM1N-201ENST00000396735 PIK3C2AO00443 1686 aa19.61■□□□□ 0.73
PPM1N-201ENST00000396735 ABTB2Q8N961 1025 aa19.6■□□□□ 0.73
PPM1N-201ENST00000396735 PRDM11Q9NQV5 511 aa19.6■□□□□ 0.73
PPM1N-201ENST00000396735 SEPT12Q8IYM1 358 aa19.59■□□□□ 0.73
PPM1N-201ENST00000396735 CARD11Q9BXL7 1154 aa19.59■□□□□ 0.73
PPM1N-201ENST00000396735 SSH2Q76I76 1423 aa19.59■□□□□ 0.73
PPM1N-201ENST00000396735 USP19O94966 1318 aa19.58■□□□□ 0.73
PPM1N-201ENST00000396735 LMO7Q8WWI1 1683 aa19.57■□□□□ 0.72
PPM1N-201ENST00000396735 ONECUT3O60422 494 aaPredicted RBP19.57■□□□□ 0.72
PPM1N-201ENST00000396735 CAMTA1Q9Y6Y1 1673 aa19.56■□□□□ 0.72
PPM1N-201ENST00000396735 FAM98CQ17RN3 349 aaKnown RBP19.56■□□□□ 0.72
PPM1N-201ENST00000396735 THSD7AQ9UPZ6 1657 aa19.55■□□□□ 0.72
PPM1N-201ENST00000396735 SPATA31A5Q5VU36 1347 aa19.54■□□□□ 0.72
PPM1N-201ENST00000396735 SPATA31A7Q8IWB4 1347 aa19.54■□□□□ 0.72
PPM1N-201ENST00000396735 SBNO2Q9Y2G9 1366 aa19.54■□□□□ 0.72
PPM1N-201ENST00000396735 MON2Q7Z3U7 1717 aa19.54■□□□□ 0.72
PPM1N-201ENST00000396735 SLIT3O75094 1523 aa19.53■□□□□ 0.72
PPM1N-201ENST00000396735 CPSF1Q10570 1443 aaKnown RBP19.52■□□□□ 0.72
PPM1N-201ENST00000396735 GCP02774 474 aa19.52■□□□□ 0.72
PPM1N-201ENST00000396735 STRN4Q9NRL3 753 aa19.52■□□□□ 0.72
PPM1N-201ENST00000396735 CPDO75976 1380 aa19.52■□□□□ 0.72
PPM1N-201ENST00000396735 CD163L1Q9NR16 1453 aa19.52■□□□□ 0.72
PPM1N-201ENST00000396735 NLRP13Q86W25 1043 aa19.51■□□□□ 0.71
PPM1N-201ENST00000396735 BRD4O60885 1362 aaPredicted RBP19.5■□□□□ 0.71
PPM1N-201ENST00000396735 A0A0G2JS52 829 aa19.5■□□□□ 0.71
PPM1N-201ENST00000396735 NLRP6P59044 892 aa19.5■□□□□ 0.71
PPM1N-201ENST00000396735 MYT1Q01538 1121 aa19.5■□□□□ 0.71
PPM1N-201ENST00000396735 FAM182BQ5T319 152 aa19.5■□□□□ 0.71
PPM1N-201ENST00000396735 SPATA31A1Q5TZJ5 1347 aa19.5■□□□□ 0.71
PPM1N-201ENST00000396735 TTC21BQ7Z4L5 1316 aa19.5■□□□□ 0.71
PPM1N-201ENST00000396735 KRT27Q7Z3Y8 459 aa19.49■□□□□ 0.71
PPM1N-201ENST00000396735 COL18A1P39060 1754 aa19.49■□□□□ 0.71
PPM1N-201ENST00000396735 LARP1Q6PKG0 1096 aaKnown RBP19.48■□□□□ 0.71
PPM1N-201ENST00000396735 ZRANB1Q9UGI0 708 aa19.48■□□□□ 0.71
PPM1N-201ENST00000396735 KTN1Q86UP2 1357 aaKnown RBP19.47■□□□□ 0.71
PPM1N-201ENST00000396735 ZBTB7CA1YPR0 619 aa19.47■□□□□ 0.71
PPM1N-201ENST00000396735 TESK2Q96S53 571 aa19.47■□□□□ 0.71
PPM1N-201ENST00000396735 PCGF6Q9BYE7 350 aa19.47■□□□□ 0.71
PPM1N-201ENST00000396735 BLMP54132 1417 aaPredicted RBP19.46■□□□□ 0.71
PPM1N-201ENST00000396735 ST20-MTHFSA0A0A6YYL1 179 aa19.46■□□□□ 0.71
PPM1N-201ENST00000396735 SLC12A5Q9H2X9 1139 aa19.46■□□□□ 0.71
PPM1N-201ENST00000396735 USP35Q9P2H5 1018 aa19.46■□□□□ 0.71
PPM1N-201ENST00000396735 RGPD5Q99666 1765 aa19.46■□□□□ 0.71
PPM1N-201ENST00000396735 COL5A2P05997 1499 aaPredicted RBP19.46■□□□□ 0.71
PPM1N-201ENST00000396735 ZNF692Q9BU19 519 aaPredicted RBP19.45■□□□□ 0.7
PPM1N-201ENST00000396735 NFAT5O94916 1531 aa19.45■□□□□ 0.7
PPM1N-201ENST00000396735 SOX12O15370 315 aa19.44■□□□□ 0.7
PPM1N-201ENST00000396735 EVA1CP58658 441 aa19.44■□□□□ 0.7
PPM1N-201ENST00000396735 DEFB132Q7Z7B7 95 aa19.44■□□□□ 0.7
PPM1N-201ENST00000396735 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.43■□□□□ 0.7
PPM1N-201ENST00000396735 TMC1Q8TDI8 760 aa19.43■□□□□ 0.7
PPM1N-201ENST00000396735 USP54Q70EL1 1684 aa19.43■□□□□ 0.7
PPM1N-201ENST00000396735 CCDC125Q86Z20 511 aa19.42■□□□□ 0.7
PPM1N-201ENST00000396735 AXIN2Q9Y2T1 843 aa19.42■□□□□ 0.7
PPM1N-201ENST00000396735 TTC21AQ8NDW8 1320 aa19.42■□□□□ 0.7
PPM1N-201ENST00000396735 AATKQ6ZMQ8 1374 aa19.42■□□□□ 0.7
PPM1N-201ENST00000396735 NME9Q86XW9 330 aa19.41■□□□□ 0.7
PPM1N-201ENST00000396735 TNS1Q9HBL0 1735 aaKnown RBP19.41■□□□□ 0.7
PPM1N-201ENST00000396735 A0A1W2PP64 1363 aa19.41■□□□□ 0.7
PPM1N-201ENST00000396735 USP47Q96K76 1375 aa19.39■□□□□ 0.69
PPM1N-201ENST00000396735 RGPD1P0DJD0 1748 aa19.38■□□□□ 0.69
PPM1N-201ENST00000396735 ARHGEF25Q86VW2 580 aa19.38■□□□□ 0.69
PPM1N-201ENST00000396735 WNK3Q9BYP7 1800 aa19.37■□□□□ 0.69
PPM1N-201ENST00000396735 PARP4Q9UKK3 1724 aaKnown RBP19.37■□□□□ 0.69
PPM1N-201ENST00000396735 CRB1P82279 1406 aa19.37■□□□□ 0.69
PPM1N-201ENST00000396735 BARGINQ6ZT62 677 aa19.37■□□□□ 0.69
PPM1N-201ENST00000396735 TCP11L2Q8N4U5 519 aa19.37■□□□□ 0.69
PPM1N-201ENST00000396735 LTN1O94822 1766 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms