RNA–Protein interactions for RNA: ENST00000396545.4

TNFSF13-205, Transcript of TNF superfamily member 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-205ENST00000396545 BRWD3Q6RI45 1802 aa24.78■■□□□ 1.56
TNFSF13-205ENST00000396545 ATP7BP35670 1465 aa24.76■■□□□ 1.55
TNFSF13-205ENST00000396545 ONECUT3O60422 494 aaPredicted RBP24.76■■□□□ 1.55
TNFSF13-205ENST00000396545 SEPT12Q8IYM1 358 aa24.76■■□□□ 1.55
TNFSF13-205ENST00000396545 TONSLQ96HA7 1378 aa24.75■■□□□ 1.55
TNFSF13-205ENST00000396545 NRAPQ86VF7 1730 aa24.75■■□□□ 1.55
TNFSF13-205ENST00000396545 ITSN1Q15811 1721 aa24.74■■□□□ 1.55
TNFSF13-205ENST00000396545 CRYBG1Q9Y4K1 1723 aa24.74■■□□□ 1.55
TNFSF13-205ENST00000396545 BLMP54132 1417 aaPredicted RBP24.74■■□□□ 1.55
TNFSF13-205ENST00000396545 NGDNQ8NEJ9 315 aaKnown RBP24.73■■□□□ 1.55
TNFSF13-205ENST00000396545 KIAA1210Q9ULL0 1709 aa24.72■■□□□ 1.55
TNFSF13-205ENST00000396545 CCDC9Q9Y3X0 531 aaKnown RBP24.72■■□□□ 1.55
TNFSF13-205ENST00000396545 COL14A1Q05707 1796 aaKnown RBP24.72■■□□□ 1.55
TNFSF13-205ENST00000396545 NUDT16Q96DE0 195 aaKnown RBP24.71■■□□□ 1.55
TNFSF13-205ENST00000396545 ZRANB1Q9UGI0 708 aa24.71■■□□□ 1.55
TNFSF13-205ENST00000396545 BTG4Q9NY30 223 aa24.7■■□□□ 1.54
TNFSF13-205ENST00000396545 PAK3O75914 559 aaPredicted RBP24.67■■□□□ 1.54
TNFSF13-205ENST00000396545 TOPAZ1Q8N9V7 1692 aa24.67■■□□□ 1.54
TNFSF13-205ENST00000396545 KRT27Q7Z3Y8 459 aa24.67■■□□□ 1.54
TNFSF13-205ENST00000396545 CDK19Q9BWU1 502 aa24.67■■□□□ 1.54
TNFSF13-205ENST00000396545 POLR3AO14802 1390 aaPredicted RBP24.65■■□□□ 1.54
TNFSF13-205ENST00000396545 FAM98CQ17RN3 349 aaKnown RBP24.63■■□□□ 1.53
TNFSF13-205ENST00000396545 NBPF1Q3BBV0 1214 aa24.63■■□□□ 1.53
TNFSF13-205ENST00000396545 PHRF1Q9P1Y6 1649 aaKnown RBP24.62■■□□□ 1.53
TNFSF13-205ENST00000396545 DEFB132Q7Z7B7 95 aa24.62■■□□□ 1.53
TNFSF13-205ENST00000396545 PRDM11Q9NQV5 511 aa24.62■■□□□ 1.53
TNFSF13-205ENST00000396545 CCDC61Q9Y6R9 512 aa24.62■■□□□ 1.53
TNFSF13-205ENST00000396545 SPATA31A5Q5VU36 1347 aa24.62■■□□□ 1.53
TNFSF13-205ENST00000396545 SPATA31A7Q8IWB4 1347 aa24.62■■□□□ 1.53
TNFSF13-205ENST00000396545 A0A0G2JS52 829 aa24.6■■□□□ 1.53
TNFSF13-205ENST00000396545 MYT1Q01538 1121 aa24.6■■□□□ 1.53
TNFSF13-205ENST00000396545 ACEP12821 1306 aa24.6■■□□□ 1.53
TNFSF13-205ENST00000396545 KIAA0232Q92628 1395 aa24.6■■□□□ 1.53
TNFSF13-205ENST00000396545 PLEKHG3A1L390 1219 aa24.59■■□□□ 1.53
TNFSF13-205ENST00000396545 SF3B2Q13435 895 aaKnown RBP24.59■■□□□ 1.53
TNFSF13-205ENST00000396545 NBPF8Q3BBV2 869 aa24.59■■□□□ 1.53
TNFSF13-205ENST00000396545 THSD7AQ9UPZ6 1657 aa24.58■■□□□ 1.53
TNFSF13-205ENST00000396545 CENPJQ9HC77 1338 aaPredicted RBP24.55■■□□□ 1.52
TNFSF13-205ENST00000396545 NUTM2GQ5VZR2 741 aa24.54■■□□□ 1.52
TNFSF13-205ENST00000396545 CHRNA2Q15822 529 aa24.54■■□□□ 1.52
TNFSF13-205ENST00000396545 NRKQ7Z2Y5 1582 aa24.54■■□□□ 1.52
TNFSF13-205ENST00000396545 SPATA31A1Q5TZJ5 1347 aa24.53■■□□□ 1.52
TNFSF13-205ENST00000396545 ZC3H6P61129 1189 aaKnown RBP24.52■■□□□ 1.52
TNFSF13-205ENST00000396545 L3MBTL2Q969R5 705 aa24.52■■□□□ 1.52
TNFSF13-205ENST00000396545 PPIP5K1Q6PFW1 1433 aa24.52■■□□□ 1.52
TNFSF13-205ENST00000396545 USP19O94966 1318 aa24.51■■□□□ 1.51
TNFSF13-205ENST00000396545 QRICH2Q9H0J4 1663 aa24.51■■□□□ 1.51
TNFSF13-205ENST00000396545 SRPK2P78362 688 aaKnown RBP24.5■■□□□ 1.51
TNFSF13-205ENST00000396545 ABTB2Q8N961 1025 aa24.5■■□□□ 1.51
TNFSF13-205ENST00000396545 BAG6P46379 1132 aa24.49■■□□□ 1.51
TNFSF13-205ENST00000396545 CABP2Q9NPB3 220 aa24.49■■□□□ 1.51
TNFSF13-205ENST00000396545 CPDO75976 1380 aa24.49■■□□□ 1.51
TNFSF13-205ENST00000396545 RGPD1P0DJD0 1748 aa24.48■■□□□ 1.51
TNFSF13-205ENST00000396545 FAM182BQ5T319 152 aa24.48■■□□□ 1.51
TNFSF13-205ENST00000396545 STRN4Q9NRL3 753 aa24.48■■□□□ 1.51
TNFSF13-205ENST00000396545 LMO7Q8WWI1 1683 aa24.47■■□□□ 1.51
TNFSF13-205ENST00000396545 SSH2Q76I76 1423 aa24.47■■□□□ 1.51
TNFSF13-205ENST00000396545 CAMTA1Q9Y6Y1 1673 aa24.46■■□□□ 1.51
TNFSF13-205ENST00000396545 BRD4O60885 1362 aaPredicted RBP24.46■■□□□ 1.51
TNFSF13-205ENST00000396545 DISP2A7MBM2 1401 aa24.45■■□□□ 1.5
TNFSF13-205ENST00000396545 TRPM1Q7Z4N2 1603 aa24.44■■□□□ 1.5
TNFSF13-205ENST00000396545 TNS1Q9HBL0 1735 aaKnown RBP24.44■■□□□ 1.5
TNFSF13-205ENST00000396545 NLRP13Q86W25 1043 aa24.43■■□□□ 1.5
TNFSF13-205ENST00000396545 USP6P35125 1406 aa24.42■■□□□ 1.5
TNFSF13-205ENST00000396545 BARGINQ6ZT62 677 aa24.42■■□□□ 1.5
TNFSF13-205ENST00000396545 GCP02774 474 aa24.42■■□□□ 1.5
TNFSF13-205ENST00000396545 CABP1Q9NZU7 370 aa24.42■■□□□ 1.5
TNFSF13-205ENST00000396545 EVA1CP58658 441 aa24.41■■□□□ 1.5
TNFSF13-205ENST00000396545 EN1Q05925 392 aaPredicted RBP24.41■■□□□ 1.5
TNFSF13-205ENST00000396545 USP35Q9P2H5 1018 aa24.41■■□□□ 1.5
TNFSF13-205ENST00000396545 LARP1Q6PKG0 1096 aaKnown RBP24.4■■□□□ 1.5
TNFSF13-205ENST00000396545 LRP5O75197 1615 aa24.4■■□□□ 1.5
TNFSF13-205ENST00000396545 FAM196AQ6ZSG2 479 aa24.38■■□□□ 1.49
TNFSF13-205ENST00000396545 MIER1Q8N108 512 aa24.38■■□□□ 1.49
TNFSF13-205ENST00000396545 COL5A2P05997 1499 aaPredicted RBP24.38■■□□□ 1.49
TNFSF13-205ENST00000396545 EVC2Q86UK5 1308 aa24.37■■□□□ 1.49
TNFSF13-205ENST00000396545 SLIT3O75094 1523 aa24.37■■□□□ 1.49
TNFSF13-205ENST00000396545 TCP11L2Q8N4U5 519 aa24.37■■□□□ 1.49
TNFSF13-205ENST00000396545 ROCK2O75116 1388 aaKnown RBP24.37■■□□□ 1.49
TNFSF13-205ENST00000396545 PSDA5PKW4 1024 aaPredicted RBP24.36■■□□□ 1.49
TNFSF13-205ENST00000396545 TRIM37O94972 964 aa24.35■■□□□ 1.49
TNFSF13-205ENST00000396545 PIK3C2AO00443 1686 aa24.35■■□□□ 1.49
TNFSF13-205ENST00000396545 NLRP6P59044 892 aa24.33■■□□□ 1.49
TNFSF13-205ENST00000396545 THRAP3Q9Y2W1 955 aaKnown RBP24.33■■□□□ 1.49
TNFSF13-205ENST00000396545 AATKQ6ZMQ8 1374 aa24.33■■□□□ 1.49
TNFSF13-205ENST00000396545 PDE3BQ13370 1112 aa24.33■■□□□ 1.48
TNFSF13-205ENST00000396545 EZH2Q15910 746 aaKnown RBP24.32■■□□□ 1.48
TNFSF13-205ENST00000396545 CAMKK2Q96RR4 588 aa24.32■■□□□ 1.48
TNFSF13-205ENST00000396545 PARP4Q9UKK3 1724 aaKnown RBP24.31■■□□□ 1.48
TNFSF13-205ENST00000396545 CRB1P82279 1406 aa24.31■■□□□ 1.48
TNFSF13-205ENST00000396545 PARD3Q8TEW0 1356 aa24.3■■□□□ 1.48
TNFSF13-205ENST00000396545 AKAP12Q02952 1782 aa24.28■■□□□ 1.48
TNFSF13-205ENST00000396545 COL18A1P39060 1754 aa24.28■■□□□ 1.48
TNFSF13-205ENST00000396545 ZBTB7CA1YPR0 619 aa24.27■■□□□ 1.48
TNFSF13-205ENST00000396545 APBA3O96018 575 aa24.27■■□□□ 1.48
TNFSF13-205ENST00000396545 R3HDM1Q15032 1099 aaKnown RBP24.27■■□□□ 1.48
TNFSF13-205ENST00000396545 ZNF692Q9BU19 519 aaPredicted RBP24.27■■□□□ 1.48
TNFSF13-205ENST00000396545 TTC21BQ7Z4L5 1316 aa24.27■■□□□ 1.47
TNFSF13-205ENST00000396545 CPSF1Q10570 1443 aaKnown RBP24.26■■□□□ 1.47
TNFSF13-205ENST00000396545 RREB1Q92766 1687 aa24.25■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms