RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 STAC3Q96MF2 364 aa10.54□□□□□ -0.72
NDE1-202ENST00000396355 GTF2E1P29083 439 aaPredicted RBP10.53□□□□□ -0.72
NDE1-202ENST00000396355 NPATQ14207 1427 aa10.53□□□□□ -0.72
NDE1-202ENST00000396355 A0A0G2JS52 829 aa10.53□□□□□ -0.72
NDE1-202ENST00000396355 CC2D1BQ5T0F9 858 aaKnown RBP10.53□□□□□ -0.72
NDE1-202ENST00000396355 SPHKAPQ2M3C7 1700 aa10.53□□□□□ -0.72
NDE1-202ENST00000396355 RICTORQ6R327 1708 aa10.53□□□□□ -0.72
NDE1-202ENST00000396355 CEP152O94986 1710 aa10.53□□□□□ -0.72
NDE1-202ENST00000396355 ZBTB22O15209 634 aa10.53□□□□□ -0.72
NDE1-202ENST00000396355 GRPEL1Q9HAV7 217 aa10.53□□□□□ -0.72
NDE1-202ENST00000396355 CDCA7LQ96GN5 454 aa10.52□□□□□ -0.72
NDE1-202ENST00000396355 CLTCL1P53675 1640 aa10.52□□□□□ -0.72
NDE1-202ENST00000396355 KIAA2012Q0VF49 1180 aa10.52□□□□□ -0.73
NDE1-202ENST00000396355 DEPDC5O75140 1603 aa10.52□□□□□ -0.73
NDE1-202ENST00000396355 PANK3Q9H999 370 aa10.52□□□□□ -0.73
NDE1-202ENST00000396355 NPHP4O75161 1426 aaPredicted RBP10.52□□□□□ -0.73
NDE1-202ENST00000396355 MYOM1P52179 1685 aa10.51□□□□□ -0.73
NDE1-202ENST00000396355 BLMP54132 1417 aaPredicted RBP10.51□□□□□ -0.73
NDE1-202ENST00000396355 RRP1P56182 461 aaKnown RBP10.51□□□□□ -0.73
NDE1-202ENST00000396355 FAM161AQ3B820 660 aa10.51□□□□□ -0.73
NDE1-202ENST00000396355 GPATCH11Q8N954 259 aa10.51□□□□□ -0.73
NDE1-202ENST00000396355 TRPM2O94759 1503 aa10.51□□□□□ -0.73
NDE1-202ENST00000396355 MTERF4Q7Z6M4 381 aaKnown RBP10.51□□□□□ -0.73
NDE1-202ENST00000396355 PREX1Q8TCU6 1659 aa10.5□□□□□ -0.73
NDE1-202ENST00000396355 HSCBQ8IWL3 235 aa10.5□□□□□ -0.73
NDE1-202ENST00000396355 FAM177BA6PVY3 158 aa10.49□□□□□ -0.73
NDE1-202ENST00000396355 NASPP49321 788 aaPredicted RBP10.49□□□□□ -0.73
NDE1-202ENST00000396355 DIP2CQ9Y2E4 1556 aa10.49□□□□□ -0.73
NDE1-202ENST00000396355 DDX49Q9Y6V7 483 aaKnown RBP10.49□□□□□ -0.73
NDE1-202ENST00000396355 MSH6P52701 1360 aa10.49□□□□□ -0.73
NDE1-202ENST00000396355 ATP7AQ04656 1500 aa10.49□□□□□ -0.73
NDE1-202ENST00000396355 MS4A1P11836 297 aa10.49□□□□□ -0.73
NDE1-202ENST00000396355 LTKP29376 864 aa10.48□□□□□ -0.73
NDE1-202ENST00000396355 SECISBP2LQ93073 1101 aaKnown RBP10.48□□□□□ -0.73
NDE1-202ENST00000396355 UGGT1Q9NYU2 1555 aa10.48□□□□□ -0.73
NDE1-202ENST00000396355 INO80Q9ULG1 1556 aaPredicted RBP10.48□□□□□ -0.73
NDE1-202ENST00000396355 TULP1O00294 542 aaPredicted RBP10.48□□□□□ -0.73
NDE1-202ENST00000396355 MFAP1P55081 439 aaKnown RBP10.48□□□□□ -0.73
NDE1-202ENST00000396355 IDI1Q13907 227 aa10.48□□□□□ -0.73
NDE1-202ENST00000396355 WDR43Q15061 677 aaKnown RBP eCLIP10.48□□□□□ -0.73
NDE1-202ENST00000396355 LMOD2Q6P5Q4 547 aa10.48□□□□□ -0.73
NDE1-202ENST00000396355 SLAIN2Q9P270 581 aa10.48□□□□□ -0.73
NDE1-202ENST00000396355 CRBNQ96SW2 442 aa10.47□□□□□ -0.73
NDE1-202ENST00000396355 MROH1Q8NDA8 1641 aa10.47□□□□□ -0.73
NDE1-202ENST00000396355 CNPY4Q8N129 248 aa10.47□□□□□ -0.73
NDE1-202ENST00000396355 TET3O43151 1660 aa10.47□□□□□ -0.73
NDE1-202ENST00000396355 A2ML1A8K2U0 1454 aa10.47□□□□□ -0.73
NDE1-202ENST00000396355 AGLP35573 1532 aa10.47□□□□□ -0.73
NDE1-202ENST00000396355 TRIM6-TRIM34B2RNG4 842 aa10.47□□□□□ -0.73
NDE1-202ENST00000396355 ADAMTS2O95450 1211 aa10.47□□□□□ -0.73
NDE1-202ENST00000396355 SMAP1Q8IYB5 467 aaPredicted RBP10.47□□□□□ -0.73
NDE1-202ENST00000396355 RNF214Q8ND24 703 aa10.47□□□□□ -0.73
NDE1-202ENST00000396355 ZNF830Q96NB3 372 aaPredicted RBP10.47□□□□□ -0.73
NDE1-202ENST00000396355 GBP4Q96PP9 640 aa10.47□□□□□ -0.73
NDE1-202ENST00000396355 TRIM34Q9BYJ4 488 aa10.47□□□□□ -0.73
NDE1-202ENST00000396355 VWDEQ8N2E2 1590 aa10.47□□□□□ -0.73
NDE1-202ENST00000396355 TMF1P82094 1093 aa10.46□□□□□ -0.73
NDE1-202ENST00000396355 FOXD4L5Q5VV16 416 aaPredicted RBP10.46□□□□□ -0.73
NDE1-202ENST00000396355 FOXD4L4Q8WXT5 416 aaPredicted RBP10.46□□□□□ -0.73
NDE1-202ENST00000396355 NGLY1Q96IV0 654 aa10.46□□□□□ -0.73
NDE1-202ENST00000396355 CCDC9Q9Y3X0 531 aaKnown RBP10.46□□□□□ -0.73
NDE1-202ENST00000396355 SYNMO15061 1565 aa10.46□□□□□ -0.74
NDE1-202ENST00000396355 CHMP4CQ96CF2 233 aa10.45□□□□□ -0.74
NDE1-202ENST00000396355 TMEM94Q12767 1356 aa10.45□□□□□ -0.74
NDE1-202ENST00000396355 C8orf37Q96NL8 207 aa10.45□□□□□ -0.74
NDE1-202ENST00000396355 TMX1Q9H3N1 280 aa10.45□□□□□ -0.74
NDE1-202ENST00000396355 CCDC66A2RUB6 948 aa10.45□□□□□ -0.74
NDE1-202ENST00000396355 RTEL1-TNFRSF6BF6WH68 1400 aa10.45□□□□□ -0.74
NDE1-202ENST00000396355 KCNA6P17658 529 aa10.44□□□□□ -0.74
NDE1-202ENST00000396355 TOMM22Q9NS69 142 aa10.44□□□□□ -0.74
NDE1-202ENST00000396355 RXRBP28702 533 aa10.44□□□□□ -0.74
NDE1-202ENST00000396355 ZSCAN30Q86W11 494 aa10.44□□□□□ -0.74
NDE1-202ENST00000396355 TSC1Q92574 1164 aa10.44□□□□□ -0.74
NDE1-202ENST00000396355 MROH2AA6NES4 1674 aa10.44□□□□□ -0.74
NDE1-202ENST00000396355 CADPS2Q86UW7 1296 aa10.44□□□□□ -0.74
NDE1-202ENST00000396355 PLEKHH1Q9ULM0 1364 aa10.44□□□□□ -0.74
NDE1-202ENST00000396355 ADAMTS8Q9UP79 889 aa10.44□□□□□ -0.74
NDE1-202ENST00000396355 ABCA6Q8N139 1617 aa10.43□□□□□ -0.74
NDE1-202ENST00000396355 SCAF11Q99590 1463 aaKnown RBP10.43□□□□□ -0.74
NDE1-202ENST00000396355 INSRP06213 1382 aa10.43□□□□□ -0.74
NDE1-202ENST00000396355 PDE3BQ13370 1112 aa10.43□□□□□ -0.74
NDE1-202ENST00000396355 ZNF772Q68DY9 489 aaPredicted RBP10.43□□□□□ -0.74
NDE1-202ENST00000396355 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.43□□□□□ -0.74
NDE1-202ENST00000396355 IFT172Q9UG01 1749 aa10.43□□□□□ -0.74
NDE1-202ENST00000396355 FOXD4L6Q3SYB3 417 aaPredicted RBP10.43□□□□□ -0.74
NDE1-202ENST00000396355 FOXD4L3Q6VB84 417 aaPredicted RBP10.43□□□□□ -0.74
NDE1-202ENST00000396355 POTEAQ6S8J7 498 aa10.42□□□□□ -0.74
NDE1-202ENST00000396355 SLC52A1Q9NWF4 448 aa10.42□□□□□ -0.74
NDE1-202ENST00000396355 HDAC5Q9UQL6 1122 aa10.42□□□□□ -0.74
NDE1-202ENST00000396355 NPHP1O15259 732 aa10.42□□□□□ -0.74
NDE1-202ENST00000396355 CEP170BQ9Y4F5 1589 aaPredicted RBP10.42□□□□□ -0.74
NDE1-202ENST00000396355 KIAA1210Q9ULL0 1709 aa10.42□□□□□ -0.74
NDE1-202ENST00000396355 DDX11L8A8MPP1 907 aa10.42□□□□□ -0.74
NDE1-202ENST00000396355 MCM4P33991 863 aa10.42□□□□□ -0.74
NDE1-202ENST00000396355 CSPP1Q1MSJ5 1256 aa10.42□□□□□ -0.74
NDE1-202ENST00000396355 NUTM2FA1L443 756 aa10.41□□□□□ -0.74
NDE1-202ENST00000396355 PPP2R1AP30153 589 aa10.41□□□□□ -0.74
NDE1-202ENST00000396355 ZNF592Q92610 1267 aa10.41□□□□□ -0.74
NDE1-202ENST00000396355 C20orf194Q5TEA3 1177 aa10.41□□□□□ -0.74
NDE1-202ENST00000396355 C3P01024 1663 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms