RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 CSB-PGBD3P0DP91 1061 aa4.23□□□□□ -1.73
VPS13C-203ENST00000395896 B4GALNT3Q6L9W6 998 aa4.23□□□□□ -1.73
VPS13C-203ENST00000395896 CAMSAP1Q5T5Y3 1602 aa4.23□□□□□ -1.73
VPS13C-203ENST00000395896 CABP2Q9NPB3 220 aa4.23□□□□□ -1.73
VPS13C-203ENST00000395896 KDM6BO15054 1643 aa4.22□□□□□ -1.73
VPS13C-203ENST00000395896 C19orf44Q9H6X5 657 aa4.22□□□□□ -1.73
VPS13C-203ENST00000395896 EDC4Q6P2E9 1401 aaKnown RBP4.22□□□□□ -1.73
VPS13C-203ENST00000395896 ATP7BP35670 1465 aa4.22□□□□□ -1.73
VPS13C-203ENST00000395896 BCORL1Q5H9F3 1711 aa4.22□□□□□ -1.73
VPS13C-203ENST00000395896 ITPRIPQ8IWB1 547 aa4.22□□□□□ -1.73
VPS13C-203ENST00000395896 TTC5Q8N0Z6 440 aa4.22□□□□□ -1.73
VPS13C-203ENST00000395896 PLEKHO1Q53GL0 409 aaPredicted RBP4.22□□□□□ -1.73
VPS13C-203ENST00000395896 AMOTL2Q9Y2J4 779 aa4.22□□□□□ -1.73
VPS13C-203ENST00000395896 PPIP5K1Q6PFW1 1433 aa4.22□□□□□ -1.73
VPS13C-203ENST00000395896 REC8O95072 547 aa4.22□□□□□ -1.73
VPS13C-203ENST00000395896 PROSER2Q86WR7 435 aaPredicted RBP4.22□□□□□ -1.73
VPS13C-203ENST00000395896 GGNBP2Q9H3C7 697 aa4.22□□□□□ -1.73
VPS13C-203ENST00000395896 SLC26A8Q96RN1 970 aa4.22□□□□□ -1.73
VPS13C-203ENST00000395896 BABAM1Q9NWV8 329 aa4.22□□□□□ -1.73
VPS13C-203ENST00000395896 ADGRB3O60242 1522 aa4.22□□□□□ -1.73
VPS13C-203ENST00000395896 GNAI3P08754 354 aa4.22□□□□□ -1.73
VPS13C-203ENST00000395896 DIP2BQ9P265 1576 aa4.22□□□□□ -1.73
VPS13C-203ENST00000395896 CLUAP1Q96AJ1 413 aa4.22□□□□□ -1.73
VPS13C-203ENST00000395896 ERVK-7P63135 1459 aa4.22□□□□□ -1.73
VPS13C-203ENST00000395896 NPHP3Q7Z494 1330 aa4.22□□□□□ -1.73
VPS13C-203ENST00000395896 RICTORQ6R327 1708 aa4.22□□□□□ -1.73
VPS13C-203ENST00000395896 UGGT1Q9NYU2 1555 aa4.21□□□□□ -1.73
VPS13C-203ENST00000395896 CCDC30Q5VVM6 783 aa4.21□□□□□ -1.73
VPS13C-203ENST00000395896 KIF3AQ9Y496 699 aa4.21□□□□□ -1.73
VPS13C-203ENST00000395896 RIMBP3CA6NJZ7 1639 aa4.21□□□□□ -1.73
VPS13C-203ENST00000395896 RIMBP3BA6NNM3 1639 aa4.21□□□□□ -1.73
VPS13C-203ENST00000395896 RIMBP3Q9UFD9 1639 aa4.21□□□□□ -1.73
VPS13C-203ENST00000395896 KIAA1211Q6ZU35 1233 aa4.21□□□□□ -1.74
VPS13C-203ENST00000395896 HTATSF1O43719 755 aaKnown RBP4.21□□□□□ -1.74
VPS13C-203ENST00000395896 IFT57Q9NWB7 429 aa4.21□□□□□ -1.74
VPS13C-203ENST00000395896 C11orf95C9JLR9 678 aaPredicted RBP4.21□□□□□ -1.74
VPS13C-203ENST00000395896 OS9Q13438 667 aaPredicted RBP4.21□□□□□ -1.74
VPS13C-203ENST00000395896 FBXO31Q5XUX0 539 aaPredicted RBP4.21□□□□□ -1.74
VPS13C-203ENST00000395896 ATF7IPQ6VMQ6 1270 aa4.21□□□□□ -1.74
VPS13C-203ENST00000395896 DIP2CQ9Y2E4 1556 aa4.21□□□□□ -1.74
VPS13C-203ENST00000395896 SOX12O15370 315 aa4.21□□□□□ -1.74
VPS13C-203ENST00000395896 NFE2L2Q16236 605 aa4.21□□□□□ -1.74
VPS13C-203ENST00000395896 ESCO1Q5FWF5 840 aa4.21□□□□□ -1.74
VPS13C-203ENST00000395896 DISP3Q9P2K9 1392 aa4.21□□□□□ -1.74
VPS13C-203ENST00000395896 FLT4P35916 1363 aa4.21□□□□□ -1.74
VPS13C-203ENST00000395896 MSH6P52701 1360 aa4.21□□□□□ -1.74
VPS13C-203ENST00000395896 CCT4P50991 539 aaKnown RBP4.21□□□□□ -1.74
VPS13C-203ENST00000395896 FAM161AQ3B820 660 aa4.21□□□□□ -1.74
VPS13C-203ENST00000395896 ARHGAP45Q92619 1136 aa4.21□□□□□ -1.74
VPS13C-203ENST00000395896 GCC1Q96CN9 775 aa4.21□□□□□ -1.74
VPS13C-203ENST00000395896 PRKAR2BP31323 418 aa4.2□□□□□ -1.74
VPS13C-203ENST00000395896 PPLO60437 1756 aa4.2□□□□□ -1.74
VPS13C-203ENST00000395896 MADDQ8WXG6 1647 aa4.2□□□□□ -1.74
VPS13C-203ENST00000395896 MAP2P11137 1827 aaKnown RBP4.2□□□□□ -1.74
VPS13C-203ENST00000395896 VWDEQ8N2E2 1590 aa4.2□□□□□ -1.74
VPS13C-203ENST00000395896 ARHGEF40Q8TER5 1519 aa4.2□□□□□ -1.74
VPS13C-203ENST00000395896 TMPOP42166 694 aaKnown RBP4.2□□□□□ -1.74
VPS13C-203ENST00000395896 EVA1CP58658 441 aa4.2□□□□□ -1.74
VPS13C-203ENST00000395896 PLEKHG1Q9ULL1 1385 aa4.2□□□□□ -1.74
VPS13C-203ENST00000395896 PLEKHH1Q9ULM0 1364 aa4.2□□□□□ -1.74
VPS13C-203ENST00000395896 CLTCL1P53675 1640 aa4.2□□□□□ -1.74
VPS13C-203ENST00000395896 NUTM2FA1L443 756 aa4.2□□□□□ -1.74
VPS13C-203ENST00000395896 NCLP19338 710 aaKnown RBP4.19□□□□□ -1.74
VPS13C-203ENST00000395896 RGS3P49796 1198 aa4.19□□□□□ -1.74
VPS13C-203ENST00000395896 IRX6P78412 446 aaPredicted RBP4.19□□□□□ -1.74
VPS13C-203ENST00000395896 PTPRCP08575 1304 aa4.19□□□□□ -1.74
VPS13C-203ENST00000395896 FYB1O15117 783 aa4.19□□□□□ -1.74
VPS13C-203ENST00000395896 MED14O60244 1454 aa4.19□□□□□ -1.74
VPS13C-203ENST00000395896 AATKQ6ZMQ8 1374 aa4.19□□□□□ -1.74
VPS13C-203ENST00000395896 HSCBQ8IWL3 235 aa4.19□□□□□ -1.74
VPS13C-203ENST00000395896 PREX1Q8TCU6 1659 aa4.19□□□□□ -1.74
VPS13C-203ENST00000395896 SLFN5Q08AF3 891 aa4.19□□□□□ -1.74
VPS13C-203ENST00000395896 CCDC146Q8IYE0 955 aa4.19□□□□□ -1.74
VPS13C-203ENST00000395896 ZBTB7CA1YPR0 619 aa4.19□□□□□ -1.74
VPS13C-203ENST00000395896 IQGAP1P46940 1657 aa4.19□□□□□ -1.74
VPS13C-203ENST00000395896 PPRC1Q5VV67 1664 aaKnown RBP4.19□□□□□ -1.74
VPS13C-203ENST00000395896 PLEKHG3A1L390 1219 aa4.19□□□□□ -1.74
VPS13C-203ENST00000395896 SRCIN1Q9C0H9 1055 aa4.19□□□□□ -1.74
VPS13C-203ENST00000395896 C9orf78Q9NZ63 289 aaPredicted RBP4.19□□□□□ -1.74
VPS13C-203ENST00000395896 SPG7Q9UQ90 795 aa4.19□□□□□ -1.74
VPS13C-203ENST00000395896 ST18O60284 1047 aa4.19□□□□□ -1.74
VPS13C-203ENST00000395896 RPAP2Q8IXW5 612 aaPredicted RBP4.19□□□□□ -1.74
VPS13C-203ENST00000395896 QRICH2Q9H0J4 1663 aa4.19□□□□□ -1.74
VPS13C-203ENST00000395896 YEATS2Q9ULM3 1422 aa4.19□□□□□ -1.74
VPS13C-203ENST00000395896 FANCIQ9NVI1 1328 aa4.19□□□□□ -1.74
VPS13C-203ENST00000395896 PHF8Q9UPP1 1060 aa4.19□□□□□ -1.74
VPS13C-203ENST00000395896 ATP6V1DQ9Y5K8 247 aa4.19□□□□□ -1.74
VPS13C-203ENST00000395896 ITSN1Q15811 1721 aa4.19□□□□□ -1.74
VPS13C-203ENST00000395896 CCDC34Q96HJ3 373 aa4.19□□□□□ -1.74
VPS13C-203ENST00000395896 FRMPD1Q5SYB0 1578 aa4.19□□□□□ -1.74
VPS13C-203ENST00000395896 TWISTNBQ3B726 338 aaPredicted RBP4.19□□□□□ -1.74
VPS13C-203ENST00000395896 SULT6B1Q6IMI4 303 aa4.19□□□□□ -1.74
VPS13C-203ENST00000395896 FKBP5Q13451 457 aaPredicted RBP4.18□□□□□ -1.74
VPS13C-203ENST00000395896 RUFY2Q8WXA3 655 aa4.18□□□□□ -1.74
VPS13C-203ENST00000395896 RBM19Q9Y4C8 960 aaKnown RBP4.18□□□□□ -1.74
VPS13C-203ENST00000395896 TSPYL4Q9UJ04 414 aa4.18□□□□□ -1.74
VPS13C-203ENST00000395896 TATP17735 454 aaPredicted RBP4.18□□□□□ -1.74
VPS13C-203ENST00000395896 MCM2P49736 904 aa4.18□□□□□ -1.74
VPS13C-203ENST00000395896 PRDM11Q9NQV5 511 aa4.18□□□□□ -1.74
VPS13C-203ENST00000395896 GNAT3A8MTJ3 354 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms