RNA–Protein interactions for RNA: ENST00000395823.2

HMGB1P10-201, Transcript of high mobility group box 1 pseudogene 10, humanhuman

BASIC

Gene HMGB1P10, Length 563 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P10-201ENST00000395823 ZBBXA8MT70 800 aa8.9□□□□□ -0.98
HMGB1P10-201ENST00000395823 ATP9BO43861 1147 aa8.9□□□□□ -0.98
HMGB1P10-201ENST00000395823 FMNL1O95466 1100 aaPredicted RBP8.9□□□□□ -0.98
HMGB1P10-201ENST00000395823 CSB-PGBD3P0DP91 1061 aa8.9□□□□□ -0.98
HMGB1P10-201ENST00000395823 PNMA1Q8ND90 353 aa8.9□□□□□ -0.98
HMGB1P10-201ENST00000395823 GZF1Q9H116 711 aaPredicted RBP8.9□□□□□ -0.98
HMGB1P10-201ENST00000395823 TSR3Q9UJK0 312 aaKnown RBP8.9□□□□□ -0.98
HMGB1P10-201ENST00000395823 TMEM88BA6NKF7 163 aa8.89□□□□□ -0.99
HMGB1P10-201ENST00000395823 NR1I2O75469 434 aa8.89□□□□□ -0.99
HMGB1P10-201ENST00000395823 PDE4CQ08493 712 aa8.89□□□□□ -0.99
HMGB1P10-201ENST00000395823 FAM163AQ96GL9 167 aaPredicted RBP8.89□□□□□ -0.99
HMGB1P10-201ENST00000395823 ZC3H4Q9UPT8 1303 aaKnown RBP8.88□□□□□ -0.99
HMGB1P10-201ENST00000395823 DXOO77932 396 aaKnown RBP8.88□□□□□ -0.99
HMGB1P10-201ENST00000395823 BRD1O95696 1058 aa8.88□□□□□ -0.99
HMGB1P10-201ENST00000395823 KANK4Q5T7N3 995 aaPredicted RBP8.88□□□□□ -0.99
HMGB1P10-201ENST00000395823 FAM160A2Q8N612 972 aaPredicted RBP8.88□□□□□ -0.99
HMGB1P10-201ENST00000395823 OCSTAMPQ9BR26 566 aa8.88□□□□□ -0.99
HMGB1P10-201ENST00000395823 FAM174AQ8TBP5 190 aa8.87□□□□□ -0.99
HMGB1P10-201ENST00000395823 WBP1LQ9NX94 342 aa8.87□□□□□ -0.99
HMGB1P10-201ENST00000395823 MSS51Q4VC12 460 aa8.86□□□□□ -0.99
HMGB1P10-201ENST00000395823 ANKRD13DQ6ZTN6 518 aa8.86□□□□□ -0.99
HMGB1P10-201ENST00000395823 NFATC2IPQ8NCF5 419 aa8.86□□□□□ -0.99
HMGB1P10-201ENST00000395823 WNT2BQ93097 391 aa8.86□□□□□ -0.99
HMGB1P10-201ENST00000395823 PRDM9Q9NQV7 894 aa8.86□□□□□ -0.99
HMGB1P10-201ENST00000395823 GOLGA8CPA6NN73 597 aa8.85□□□□□ -0.99
HMGB1P10-201ENST00000395823 CCNYL3P0C7X3 344 aa8.85□□□□□ -0.99
HMGB1P10-201ENST00000395823 RANGAP1P46060 587 aaPredicted RBP8.85□□□□□ -0.99
HMGB1P10-201ENST00000395823 KCNA1Q09470 495 aa8.85□□□□□ -0.99
HMGB1P10-201ENST00000395823 TMCO4Q5TGY1 634 aa8.85□□□□□ -0.99
HMGB1P10-201ENST00000395823 CTHP32929 405 aa8.84□□□□□ -0.99
HMGB1P10-201ENST00000395823 MMP16P51512 607 aa8.84□□□□□ -0.99
HMGB1P10-201ENST00000395823 RGS22Q8NE09 1264 aa8.84□□□□□ -0.99
HMGB1P10-201ENST00000395823 ZMIZ1Q9ULJ6 1067 aa8.84□□□□□ -0.99
HMGB1P10-201ENST00000395823 USP17L3A6NCW0 530 aa8.83□□□□□ -1
HMGB1P10-201ENST00000395823 USP17L4A6NCW7 530 aa8.83□□□□□ -1
HMGB1P10-201ENST00000395823 USP17L5A8MUK1 530 aa8.83□□□□□ -1
HMGB1P10-201ENST00000395823 USP17L2Q6R6M4 530 aa8.83□□□□□ -1
HMGB1P10-201ENST00000395823 USP17L1Q7RTZ2 530 aa8.83□□□□□ -1
HMGB1P10-201ENST00000395823 EVA1BQ9NVM1 165 aa8.83□□□□□ -1
HMGB1P10-201ENST00000395823 KCNH2Q12809 1159 aa8.82□□□□□ -1
HMGB1P10-201ENST00000395823 PLEKHM2Q8IWE5 1019 aa8.82□□□□□ -1
HMGB1P10-201ENST00000395823 STK32AQ8WU08 396 aa8.82□□□□□ -1
HMGB1P10-201ENST00000395823 SPSB2Q99619 263 aa8.82□□□□□ -1
HMGB1P10-201ENST00000395823 NUDT12Q9BQG2 462 aa8.82□□□□□ -1
HMGB1P10-201ENST00000395823 VRTNQ9H8Y1 702 aa8.82□□□□□ -1
HMGB1P10-201ENST00000395823 TLL1O43897 1013 aa8.81□□□□□ -1
HMGB1P10-201ENST00000395823 SKIP12755 728 aa8.81□□□□□ -1
HMGB1P10-201ENST00000395823 MFAP1P55081 439 aaKnown RBP8.81□□□□□ -1
HMGB1P10-201ENST00000395823 COPS2P61201 443 aa8.81□□□□□ -1
HMGB1P10-201ENST00000395823 ELOAQ14241 798 aaKnown RBP8.81□□□□□ -1
HMGB1P10-201ENST00000395823 PDXDC2PQ6P474 469 aa8.81□□□□□ -1
HMGB1P10-201ENST00000395823 DEPDC4Q8N2C3 294 aa8.81□□□□□ -1
HMGB1P10-201ENST00000395823 STAC3Q96MF2 364 aa8.81□□□□□ -1
HMGB1P10-201ENST00000395823 GPSM3Q9Y4H4 160 aa8.81□□□□□ -1
HMGB1P10-201ENST00000395823 PHTF2Q8N3S3 785 aa8.8□□□□□ -1
HMGB1P10-201ENST00000395823 CEP126Q9P2H0 1117 aa8.8□□□□□ -1
HMGB1P10-201ENST00000395823 PATL2C9JE40 543 aaKnown RBP8.79□□□□□ -1
HMGB1P10-201ENST00000395823 TMEM164Q5U3C3 297 aa8.79□□□□□ -1
HMGB1P10-201ENST00000395823 THSD4Q6ZMP0 1018 aa8.79□□□□□ -1
HMGB1P10-201ENST00000395823 MTMR7Q9Y216 660 aa8.79□□□□□ -1
HMGB1P10-201ENST00000395823 PTK2Q05397 1052 aa8.78□□□□□ -1
HMGB1P10-201ENST00000395823 CRTC2Q53ET0 693 aaPredicted RBP8.78□□□□□ -1
HMGB1P10-201ENST00000395823 PTCRAQ6ISU1 281 aaPredicted RBP8.78□□□□□ -1
HMGB1P10-201ENST00000395823 GPKOWQ92917 476 aaPredicted RBP eCLIP8.78□□□□□ -1
HMGB1P10-201ENST00000395823 CHIC2Q9UKJ5 165 aa8.78□□□□□ -1
HMGB1P10-201ENST00000395823 PCDHB9Q9Y5E1 797 aa8.78□□□□□ -1
HMGB1P10-201ENST00000395823 IVNS1ABPQ9Y6Y0 642 aa8.78□□□□□ -1
HMGB1P10-201ENST00000395823 NBPF14Q5TI25 921 aa8.77□□□□□ -1.01
HMGB1P10-201ENST00000395823 SH3BP5LQ7L8J4 393 aa8.77□□□□□ -1.01
HMGB1P10-201ENST00000395823 ARMC2Q8NEN0 867 aa8.77□□□□□ -1.01
HMGB1P10-201ENST00000395823 ADAM32Q8TC27 787 aa8.77□□□□□ -1.01
HMGB1P10-201ENST00000395823 KRTAP3-3Q9BYR6 98 aa8.77□□□□□ -1.01
HMGB1P10-201ENST00000395823 KRTAP3-2Q9BYR7 98 aa8.77□□□□□ -1.01
HMGB1P10-201ENST00000395823 SLAIN2Q9P270 581 aa8.77□□□□□ -1.01
HMGB1P10-201ENST00000395823 NOVA2Q9UNW9 492 aaKnown RBP8.77□□□□□ -1.01
HMGB1P10-201ENST00000395823 ADH1BP00325 375 aa8.76□□□□□ -1.01
HMGB1P10-201ENST00000395823 NCOA4Q13772 614 aa8.76□□□□□ -1.01
HMGB1P10-201ENST00000395823 FAM196BA6NMK8 535 aa8.75□□□□□ -1.01
HMGB1P10-201ENST00000395823 USP17L15C9J2P7 530 aa8.75□□□□□ -1.01
HMGB1P10-201ENST00000395823 USP17L10C9JJH3 530 aa8.75□□□□□ -1.01
HMGB1P10-201ENST00000395823 USP17L13C9JLJ4 530 aa8.75□□□□□ -1.01
HMGB1P10-201ENST00000395823 USP17L12C9JPN9 530 aa8.75□□□□□ -1.01
HMGB1P10-201ENST00000395823 USP17L11C9JVI0 530 aa8.75□□□□□ -1.01
HMGB1P10-201ENST00000395823 USP17L21D6R901 530 aa8.75□□□□□ -1.01
HMGB1P10-201ENST00000395823 USP17L18D6R9N7 530 aa8.75□□□□□ -1.01
HMGB1P10-201ENST00000395823 USP17L22D6RA61 530 aa8.75□□□□□ -1.01
HMGB1P10-201ENST00000395823 USP17L17D6RBQ6 530 aa8.75□□□□□ -1.01
HMGB1P10-201ENST00000395823 USP17L19D6RCP7 530 aa8.75□□□□□ -1.01
HMGB1P10-201ENST00000395823 USP17L20D6RJB6 530 aa8.75□□□□□ -1.01
HMGB1P10-201ENST00000395823 ZPR1O75312 459 aa8.75□□□□□ -1.01
HMGB1P10-201ENST00000395823 USP17L24Q0WX57 530 aa8.75□□□□□ -1.01
HMGB1P10-201ENST00000395823 PHLDB3Q6NSJ2 640 aa8.75□□□□□ -1.01
HMGB1P10-201ENST00000395823 RNF135Q8IUD6 432 aa8.75□□□□□ -1.01
HMGB1P10-201ENST00000395823 PLPP7Q8NBV4 271 aa8.75□□□□□ -1.01
HMGB1P10-201ENST00000395823 UNC93B1Q9H1C4 597 aa8.75□□□□□ -1.01
HMGB1P10-201ENST00000395823 MKRN1Q9UHC7 482 aaKnown RBP8.75□□□□□ -1.01
HMGB1P10-201ENST00000395823 POTEMA6NI47 508 aa8.74□□□□□ -1.01
HMGB1P10-201ENST00000395823 FAM69CQ0P6D2 419 aa8.74□□□□□ -1.01
HMGB1P10-201ENST00000395823 PTK7Q13308 1070 aa8.74□□□□□ -1.01
HMGB1P10-201ENST00000395823 TSGA10IPQ3SY00 556 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms