RNA–Protein interactions for RNA: ENST00000395577.2

CDKN3-203, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-203ENST00000395577 COPS2P61201 443 aa10.09□□□□□ -0.79
CDKN3-203ENST00000395577 THSD4Q6ZMP0 1018 aa10.09□□□□□ -0.79
CDKN3-203ENST00000395577 SPSB2Q99619 263 aa10.09□□□□□ -0.79
CDKN3-203ENST00000395577 ZC3H4Q9UPT8 1303 aaKnown RBP10.08□□□□□ -0.8
CDKN3-203ENST00000395577 ZBBXA8MT70 800 aa10.08□□□□□ -0.8
CDKN3-203ENST00000395577 FAM160A2Q8N612 972 aaPredicted RBP10.08□□□□□ -0.8
CDKN3-203ENST00000395577 PDE4CQ08493 712 aa10.07□□□□□ -0.8
CDKN3-203ENST00000395577 KCTD17Q8N5Z5 321 aa10.07□□□□□ -0.8
CDKN3-203ENST00000395577 DXOO77932 396 aaKnown RBP10.06□□□□□ -0.8
CDKN3-203ENST00000395577 CCNYL3P0C7X3 344 aa10.06□□□□□ -0.8
CDKN3-203ENST00000395577 SRPK2P78362 688 aaKnown RBP10.06□□□□□ -0.8
CDKN3-203ENST00000395577 AEBP1Q8IUX7 1158 aa10.06□□□□□ -0.8
CDKN3-203ENST00000395577 KCTD12Q96CX2 325 aaKnown RBP10.06□□□□□ -0.8
CDKN3-203ENST00000395577 NUDT12Q9BQG2 462 aa10.06□□□□□ -0.8
CDKN3-203ENST00000395577 KRTAP3-3Q9BYR6 98 aa10.05□□□□□ -0.8
CDKN3-203ENST00000395577 KRTAP3-2Q9BYR7 98 aa10.05□□□□□ -0.8
CDKN3-203ENST00000395577 EVA1BQ9NVM1 165 aa10.05□□□□□ -0.8
CDKN3-203ENST00000395577 MMP16P51512 607 aa10.04□□□□□ -0.8
CDKN3-203ENST00000395577 KCNH2Q12809 1159 aa10.04□□□□□ -0.8
CDKN3-203ENST00000395577 TBC1D9Q6ZT07 1266 aa10.04□□□□□ -0.8
CDKN3-203ENST00000395577 ARMC2Q8NEN0 867 aa10.04□□□□□ -0.8
CDKN3-203ENST00000395577 PRDM9Q9NQV7 894 aa10.04□□□□□ -0.8
CDKN3-203ENST00000395577 CSB-PGBD3P0DP91 1061 aa10.03□□□□□ -0.8
CDKN3-203ENST00000395577 MAFBQ9Y5Q3 323 aaPredicted RBP10.03□□□□□ -0.8
CDKN3-203ENST00000395577 ATP9BO43861 1147 aa10.02□□□□□ -0.81
CDKN3-203ENST00000395577 TLL1O43897 1013 aa10.02□□□□□ -0.81
CDKN3-203ENST00000395577 CDCA8Q53HL2 280 aa10.02□□□□□ -0.81
CDKN3-203ENST00000395577 NYAP1Q6ZVC0 841 aa10.02□□□□□ -0.81
CDKN3-203ENST00000395577 ZPR1O75312 459 aa10.01□□□□□ -0.81
CDKN3-203ENST00000395577 ADH1BP00325 375 aa10.01□□□□□ -0.81
CDKN3-203ENST00000395577 PTK2Q05397 1052 aa10.01□□□□□ -0.81
CDKN3-203ENST00000395577 PDXDC2PQ6P474 469 aa10.01□□□□□ -0.81
CDKN3-203ENST00000395577 GPKOWQ92917 476 aaPredicted RBP eCLIP10.01□□□□□ -0.81
CDKN3-203ENST00000395577 MTRQ99707 1265 aa10□□□□□ -0.81
CDKN3-203ENST00000395577 USTQ9Y2C2 406 aa10□□□□□ -0.81
CDKN3-203ENST00000395577 GPSM3Q9Y4H4 160 aa10□□□□□ -0.81
CDKN3-203ENST00000395577 PIK3CDO00329 1044 aa9.99□□□□□ -0.81
CDKN3-203ENST00000395577 NBPF14Q5TI25 921 aa9.99□□□□□ -0.81
CDKN3-203ENST00000395577 CCDC24Q8N4L8 307 aa9.98□□□□□ -0.81
CDKN3-203ENST00000395577 ATG7O95352 703 aa9.97□□□□□ -0.81
CDKN3-203ENST00000395577 SKIP12755 728 aa9.97□□□□□ -0.81
CDKN3-203ENST00000395577 PTPN5P54829 565 aa9.97□□□□□ -0.81
CDKN3-203ENST00000395577 NFATC2IPQ8NCF5 419 aa9.97□□□□□ -0.81
CDKN3-203ENST00000395577 ZNF592Q92610 1267 aa9.97□□□□□ -0.81
CDKN3-203ENST00000395577 VRTNQ9H8Y1 702 aa9.97□□□□□ -0.81
CDKN3-203ENST00000395577 POTEMA6NI47 508 aa9.96□□□□□ -0.82
CDKN3-203ENST00000395577 OCSTAMPQ9BR26 566 aa9.96□□□□□ -0.82
CDKN3-203ENST00000395577 SLC6A16Q9GZN6 736 aa9.96□□□□□ -0.82
CDKN3-203ENST00000395577 UNC93B1Q9H1C4 597 aa9.96□□□□□ -0.82
CDKN3-203ENST00000395577 IL21Q9HBE4 155 aa9.96□□□□□ -0.82
CDKN3-203ENST00000395577 PCDHB9Q9Y5E1 797 aa9.96□□□□□ -0.82
CDKN3-203ENST00000395577 MCCD1P59942 119 aaPredicted RBP9.95□□□□□ -0.82
CDKN3-203ENST00000395577 ARHGAP9Q9BRR9 750 aa9.95□□□□□ -0.82
CDKN3-203ENST00000395577 SLFNL1Q499Z3 407 aa9.94□□□□□ -0.82
CDKN3-203ENST00000395577 TJAP1Q5JTD0 557 aa9.94□□□□□ -0.82
CDKN3-203ENST00000395577 KANK4Q5T7N3 995 aaPredicted RBP9.94□□□□□ -0.82
CDKN3-203ENST00000395577 PTCRAQ6ISU1 281 aaPredicted RBP9.94□□□□□ -0.82
CDKN3-203ENST00000395577 ADAM32Q8TC27 787 aa9.94□□□□□ -0.82
CDKN3-203ENST00000395577 ZNF516Q92618 1163 aa9.94□□□□□ -0.82
CDKN3-203ENST00000395577 CEP126Q9P2H0 1117 aa9.94□□□□□ -0.82
CDKN3-203ENST00000395577 CCDC9Q9Y3X0 531 aaKnown RBP9.94□□□□□ -0.82
CDKN3-203ENST00000395577 CARNS1A5YM72 827 aa9.93□□□□□ -0.82
CDKN3-203ENST00000395577 USP17L3A6NCW0 530 aa9.93□□□□□ -0.82
CDKN3-203ENST00000395577 USP17L4A6NCW7 530 aa9.93□□□□□ -0.82
CDKN3-203ENST00000395577 USP17L5A8MUK1 530 aa9.93□□□□□ -0.82
CDKN3-203ENST00000395577 USP17L2Q6R6M4 530 aa9.93□□□□□ -0.82
CDKN3-203ENST00000395577 USP17L1Q7RTZ2 530 aa9.93□□□□□ -0.82
CDKN3-203ENST00000395577 FAM174AQ8TBP5 190 aa9.93□□□□□ -0.82
CDKN3-203ENST00000395577 MYT1LQ9UL68 1186 aa9.93□□□□□ -0.82
CDKN3-203ENST00000395577 ZBTB33Q86T24 672 aa9.92□□□□□ -0.82
CDKN3-203ENST00000395577 RNF135Q8IUD6 432 aa9.92□□□□□ -0.82
CDKN3-203ENST00000395577 PLEKHM2Q8IWE5 1019 aa9.92□□□□□ -0.82
CDKN3-203ENST00000395577 BRD1O95696 1058 aa9.91□□□□□ -0.82
CDKN3-203ENST00000395577 SH3BP5LQ7L8J4 393 aa9.91□□□□□ -0.82
CDKN3-203ENST00000395577 DEPDC4Q8N2C3 294 aa9.91□□□□□ -0.82
CDKN3-203ENST00000395577 PATL2C9JE40 543 aaKnown RBP9.9□□□□□ -0.82
CDKN3-203ENST00000395577 S1PR4O95977 384 aa9.89□□□□□ -0.83
CDKN3-203ENST00000395577 DZIP3Q86Y13 1208 aaKnown RBP9.89□□□□□ -0.83
CDKN3-203ENST00000395577 PHTF2Q8N3S3 785 aa9.89□□□□□ -0.83
CDKN3-203ENST00000395577 GZF1Q9H116 711 aaPredicted RBP9.89□□□□□ -0.83
CDKN3-203ENST00000395577 MAGEB6P1A0A0J9YX57 407 aa9.88□□□□□ -0.83
CDKN3-203ENST00000395577 TMEM88BA6NKF7 163 aa9.88□□□□□ -0.83
CDKN3-203ENST00000395577 KCNA1Q09470 495 aa9.88□□□□□ -0.83
CDKN3-203ENST00000395577 ELOAQ14241 798 aaKnown RBP9.88□□□□□ -0.83
CDKN3-203ENST00000395577 PLPP7Q8NBV4 271 aa9.88□□□□□ -0.83
CDKN3-203ENST00000395577 NKX2-3Q8TAU0 364 aa9.88□□□□□ -0.83
CDKN3-203ENST00000395577 BAP1Q92560 729 aa9.88□□□□□ -0.83
CDKN3-203ENST00000395577 CARD14Q9BXL6 1004 aa9.88□□□□□ -0.83
CDKN3-203ENST00000395577 MKRN1Q9UHC7 482 aaKnown RBP9.88□□□□□ -0.83
CDKN3-203ENST00000395577 NCOA4Q13772 614 aa9.87□□□□□ -0.83
CDKN3-203ENST00000395577 AGERQ15109 404 aa9.87□□□□□ -0.83
CDKN3-203ENST00000395577 LINC01559Q495D7 138 aa9.87□□□□□ -0.83
CDKN3-203ENST00000395577 CDAN1Q8IWY9 1227 aa9.87□□□□□ -0.83
CDKN3-203ENST00000395577 FCF1Q9Y324 198 aaKnown RBP9.87□□□□□ -0.83
CDKN3-203ENST00000395577 LZTS3O60299 673 aaPredicted RBP9.86□□□□□ -0.83
CDKN3-203ENST00000395577 SH3RF1Q7Z6J0 888 aa9.86□□□□□ -0.83
CDKN3-203ENST00000395577 BPHLQ86WA6 291 aaPredicted RBP9.86□□□□□ -0.83
CDKN3-203ENST00000395577 NOVA2Q9UNW9 492 aaKnown RBP9.86□□□□□ -0.83
CDKN3-203ENST00000395577 MAP7D1Q3KQU3 841 aa9.85□□□□□ -0.83
CDKN3-203ENST00000395577 LARP1Q6PKG0 1096 aaKnown RBP9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms