RNA–Protein interactions for RNA: ENST00000395548.6

AP3S1-202, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 1 (best)

Gene AP3S1, Length 1,180 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-202ENST00000395548 CCDC88BA6NC98 1476 aa10.11□□□□□ -0.79
AP3S1-202ENST00000395548 SPIRE2Q8WWL2 714 aa10.11□□□□□ -0.79
AP3S1-202ENST00000395548 HLA-CQ95604 372 aa10.11□□□□□ -0.79
AP3S1-202ENST00000395548 BEGAINQ9BUH8 593 aa10.11□□□□□ -0.79
AP3S1-202ENST00000395548 SLC24A3Q9HC58 644 aa10.11□□□□□ -0.79
AP3S1-202ENST00000395548 RPIAP49247 311 aa10.1□□□□□ -0.79
AP3S1-202ENST00000395548 DIXDC1Q155Q3 683 aa10.1□□□□□ -0.79
AP3S1-202ENST00000395548 PLA2G2CQ5R387 149 aa10.1□□□□□ -0.79
AP3S1-202ENST00000395548 PRDM9Q9NQV7 894 aa10.1□□□□□ -0.79
AP3S1-202ENST00000395548 FDX1P10109 184 aa10.09□□□□□ -0.79
AP3S1-202ENST00000395548 MMP16P51512 607 aa10.09□□□□□ -0.79
AP3S1-202ENST00000395548 HSPA2P54652 639 aa10.09□□□□□ -0.79
AP3S1-202ENST00000395548 GUCA2AQ02747 115 aa10.09□□□□□ -0.79
AP3S1-202ENST00000395548 PDE4DQ08499 809 aa10.09□□□□□ -0.79
AP3S1-202ENST00000395548 CD2BP2O95400 341 aaKnown RBP10.08□□□□□ -0.8
AP3S1-202ENST00000395548 ZNF697Q5TEC3 545 aa10.08□□□□□ -0.8
AP3S1-202ENST00000395548 ZBTB24O43167 697 aaPredicted RBP10.07□□□□□ -0.8
AP3S1-202ENST00000395548 ASXL2Q76L83 1435 aa10.07□□□□□ -0.8
AP3S1-202ENST00000395548 DXOO77932 396 aaKnown RBP10.06□□□□□ -0.8
AP3S1-202ENST00000395548 RETREG3Q86VR2 466 aa10.06□□□□□ -0.8
AP3S1-202ENST00000395548 FHAD1B1AJZ9 1412 aa10.06□□□□□ -0.8
AP3S1-202ENST00000395548 C6orf229H3BNL8 230 aa10.05□□□□□ -0.8
AP3S1-202ENST00000395548 MS4A1P11836 297 aa10.05□□□□□ -0.8
AP3S1-202ENST00000395548 PRR20EP86478 221 aa10.05□□□□□ -0.8
AP3S1-202ENST00000395548 PRR20CP86479 221 aa10.05□□□□□ -0.8
AP3S1-202ENST00000395548 PRR20DP86480 221 aa10.05□□□□□ -0.8
AP3S1-202ENST00000395548 PRR20BP86481 221 aa10.05□□□□□ -0.8
AP3S1-202ENST00000395548 PRR20AP86496 221 aa10.05□□□□□ -0.8
AP3S1-202ENST00000395548 MOXD2PA6NHM9 499 aa10.04□□□□□ -0.8
AP3S1-202ENST00000395548 NDUFV2P19404 249 aa10.04□□□□□ -0.8
AP3S1-202ENST00000395548 GJA5P36382 358 aa10.04□□□□□ -0.8
AP3S1-202ENST00000395548 SYMPKQ92797 1274 aaKnown RBP10.04□□□□□ -0.8
AP3S1-202ENST00000395548 TBC1D2Q9BYX2 928 aa10.04□□□□□ -0.8
AP3S1-202ENST00000395548 PCDHGC3Q9UN70 934 aa10.04□□□□□ -0.8
AP3S1-202ENST00000395548 ADAMTS12P58397 1594 aa10.04□□□□□ -0.8
AP3S1-202ENST00000395548 KIAA0586Q9BVV6 1533 aa10.03□□□□□ -0.8
AP3S1-202ENST00000395548 JUNDP17535 347 aa10.03□□□□□ -0.8
AP3S1-202ENST00000395548 ABCA5Q8WWZ7 1642 aa10.03□□□□□ -0.8
AP3S1-202ENST00000395548 ABCA10Q8WWZ4 1543 aa10.02□□□□□ -0.8
AP3S1-202ENST00000395548 TRIM67Q6ZTA4 783 aa10.02□□□□□ -0.81
AP3S1-202ENST00000395548 ADAMTSL3P82987 1691 aa10.02□□□□□ -0.81
AP3S1-202ENST00000395548 KIF21BO75037 1637 aa10.01□□□□□ -0.81
AP3S1-202ENST00000395548 SPDYE5A6NIY4 337 aa10.01□□□□□ -0.81
AP3S1-202ENST00000395548 GDF9O60383 454 aa10.01□□□□□ -0.81
AP3S1-202ENST00000395548 TRAF7Q6Q0C0 670 aa10.01□□□□□ -0.81
AP3S1-202ENST00000395548 CCDC24Q8N4L8 307 aa10.01□□□□□ -0.81
AP3S1-202ENST00000395548 ABCC2Q92887 1545 aa10.01□□□□□ -0.81
AP3S1-202ENST00000395548 MAP3K4Q9Y6R4 1608 aa10□□□□□ -0.81
AP3S1-202ENST00000395548 IQSEC2Q5JU85 1478 aa9.99□□□□□ -0.81
AP3S1-202ENST00000395548 MTMR2Q13614 643 aa9.99□□□□□ -0.81
AP3S1-202ENST00000395548 RSBN1LQ6PCB5 846 aaPredicted RBP9.99□□□□□ -0.81
AP3S1-202ENST00000395548 EPRSP07814 1512 aaKnown RBP9.98□□□□□ -0.81
AP3S1-202ENST00000395548 CUX1P39880 1505 aa9.98□□□□□ -0.81
AP3S1-202ENST00000395548 TNFRSF10AO00220 468 aa9.98□□□□□ -0.81
AP3S1-202ENST00000395548 SPTLC1O15269 473 aa9.98□□□□□ -0.81
AP3S1-202ENST00000395548 FOXC1Q12948 553 aa9.98□□□□□ -0.81
AP3S1-202ENST00000395548 DGAT1O75907 488 aa9.97□□□□□ -0.81
AP3S1-202ENST00000395548 TRIM32Q13049 653 aa9.97□□□□□ -0.81
AP3S1-202ENST00000395548 RIC3Q7Z5B4 369 aa9.97□□□□□ -0.81
AP3S1-202ENST00000395548 PKD2L1Q9P0L9 805 aa9.97□□□□□ -0.81
AP3S1-202ENST00000395548 PTPRGP23470 1445 aa9.97□□□□□ -0.81
AP3S1-202ENST00000395548 PKDCCQ504Y2 493 aa9.96□□□□□ -0.82
AP3S1-202ENST00000395548 NUDT12Q9BQG2 462 aa9.96□□□□□ -0.82
AP3S1-202ENST00000395548 ARID4BQ4LE39 1312 aaPredicted RBP9.96□□□□□ -0.82
AP3S1-202ENST00000395548 YEATS2Q9ULM3 1422 aa9.96□□□□□ -0.82
AP3S1-202ENST00000395548 DESI1Q6ICB0 168 aa9.95□□□□□ -0.82
AP3S1-202ENST00000395548 PRR7Q8TB68 274 aa9.95□□□□□ -0.82
AP3S1-202ENST00000395548 PRPF38BQ5VTL8 546 aaKnown RBP9.94□□□□□ -0.82
AP3S1-202ENST00000395548 RSPH6AQ9H0K4 717 aa9.94□□□□□ -0.82
AP3S1-202ENST00000395548 ZBTB3Q9H5J0 574 aa9.94□□□□□ -0.82
AP3S1-202ENST00000395548 PCDHB15Q9Y5E8 787 aa9.94□□□□□ -0.82
AP3S1-202ENST00000395548 MED1Q15648 1581 aaPredicted RBP9.93□□□□□ -0.82
AP3S1-202ENST00000395548 FAM187AA6NFU0 413 aa9.93□□□□□ -0.82
AP3S1-202ENST00000395548 PTPRNQ16849 979 aa9.93□□□□□ -0.82
AP3S1-202ENST00000395548 CYP4X1Q8N118 509 aa9.93□□□□□ -0.82
AP3S1-202ENST00000395548 WNT7AO00755 349 aa9.92□□□□□ -0.82
AP3S1-202ENST00000395548 CCNYL3P0C7X3 344 aa9.92□□□□□ -0.82
AP3S1-202ENST00000395548 TUSC1Q2TAM9 212 aa9.92□□□□□ -0.82
AP3S1-202ENST00000395548 MYSM1Q5VVJ2 828 aa9.92□□□□□ -0.82
AP3S1-202ENST00000395548 MADDQ8WXG6 1647 aa9.92□□□□□ -0.82
AP3S1-202ENST00000395548 UBAP1LF5GYI3 381 aa9.91□□□□□ -0.82
AP3S1-202ENST00000395548 HRCP23327 699 aa9.91□□□□□ -0.82
AP3S1-202ENST00000395548 WNT7BP56706 349 aa9.91□□□□□ -0.82
AP3S1-202ENST00000395548 RUSC2Q8N2Y8 1516 aa9.91□□□□□ -0.82
AP3S1-202ENST00000395548 LCE2BO14633 110 aa9.9□□□□□ -0.82
AP3S1-202ENST00000395548 EVA1BQ9NVM1 165 aa9.9□□□□□ -0.82
AP3S1-202ENST00000395548 ERICH3Q5RHP9 1530 aa9.9□□□□□ -0.82
AP3S1-202ENST00000395548 MAGI3Q5TCQ9 1506 aa9.9□□□□□ -0.82
AP3S1-202ENST00000395548 BCORL1Q5H9F3 1711 aa9.9□□□□□ -0.83
AP3S1-202ENST00000395548 TTC24A2A3L6 582 aaPredicted RBP9.89□□□□□ -0.83
AP3S1-202ENST00000395548 CSPP1Q1MSJ5 1256 aa9.89□□□□□ -0.83
AP3S1-202ENST00000395548 TOR4AQ9NXH8 423 aa9.89□□□□□ -0.83
AP3S1-202ENST00000395548 UHRF1BP1LA0JNW5 1464 aa9.89□□□□□ -0.83
AP3S1-202ENST00000395548 CD109Q6YHK3 1445 aa9.89□□□□□ -0.83
AP3S1-202ENST00000395548 TTBK1Q5TCY1 1321 aaPredicted RBP9.88□□□□□ -0.83
AP3S1-202ENST00000395548 NUTM2BA6NNL0 878 aaPredicted RBP9.88□□□□□ -0.83
AP3S1-202ENST00000395548 NUTM2EB1AL46 878 aaPredicted RBP9.88□□□□□ -0.83
AP3S1-202ENST00000395548 NUTM2DQ5VT03 806 aaPredicted RBP9.88□□□□□ -0.83
AP3S1-202ENST00000395548 PTCRAQ6ISU1 281 aaPredicted RBP9.88□□□□□ -0.83
AP3S1-202ENST00000395548 NUTM2AQ8IVF1 878 aaPredicted RBP9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms