RNA–Protein interactions for RNA: ENST00000395098.5

VPS26A-203, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5 BASIC

Gene VPS26A, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-203ENST00000395098 ESCO1Q5FWF5 840 aa17.69■□□□□ 0.42
VPS26A-203ENST00000395098 ORAI2Q96SN7 254 aa17.69■□□□□ 0.42
VPS26A-203ENST00000395098 DMRT2Q9Y5R5 561 aa17.69■□□□□ 0.42
VPS26A-203ENST00000395098 ANKRD26Q9UPS8 1709 aa17.67■□□□□ 0.42
VPS26A-203ENST00000395098 FBLN1P23142 703 aa17.67■□□□□ 0.42
VPS26A-203ENST00000395098 XIRP1Q702N8 1843 aaKnown RBP17.67■□□□□ 0.42
VPS26A-203ENST00000395098 C1orf167Q5SNV9 1468 aa17.66■□□□□ 0.42
VPS26A-203ENST00000395098 MTHFSP49914 203 aa17.66■□□□□ 0.42
VPS26A-203ENST00000395098 ATF3P18847 181 aa17.65■□□□□ 0.42
VPS26A-203ENST00000395098 MST1RQ04912 1400 aa17.65■□□□□ 0.42
VPS26A-203ENST00000395098 HNRNPUQ00839 825 aaKnown RBP eCLIP17.65■□□□□ 0.42
VPS26A-203ENST00000395098 DCCP43146 1447 aa17.65■□□□□ 0.42
VPS26A-203ENST00000395098 MSH6P52701 1360 aa17.64■□□□□ 0.41
VPS26A-203ENST00000395098 COG3Q96JB2 828 aa17.63■□□□□ 0.41
VPS26A-203ENST00000395098 CENPBP07199 599 aaPredicted RBP17.62■□□□□ 0.41
VPS26A-203ENST00000395098 SENP3-EIF4A1A0A087X0R7 540 aa17.62■□□□□ 0.41
VPS26A-203ENST00000395098 CADPS2Q86UW7 1296 aa17.62■□□□□ 0.41
VPS26A-203ENST00000395098 TTC21AQ8NDW8 1320 aa17.61■□□□□ 0.41
VPS26A-203ENST00000395098 FOXO3O43524 673 aa17.61■□□□□ 0.41
VPS26A-203ENST00000395098 OVOS2A0A0J9YW53 1432 aa17.61■□□□□ 0.41
VPS26A-203ENST00000395098 OVOS2Q6IE36 1432 aa17.61■□□□□ 0.41
VPS26A-203ENST00000395098 ADAMTS8Q9UP79 889 aa17.61■□□□□ 0.41
VPS26A-203ENST00000395098 XPCQ01831 940 aaPredicted RBP17.6■□□□□ 0.41
VPS26A-203ENST00000395098 SCAF1Q9H7N4 1312 aaKnown RBP17.6■□□□□ 0.41
VPS26A-203ENST00000395098 POLKQ9UBT6 870 aa17.59■□□□□ 0.41
VPS26A-203ENST00000395098 PSME1Q06323 249 aa17.59■□□□□ 0.41
VPS26A-203ENST00000395098 PIK3C2AO00443 1686 aa17.59■□□□□ 0.41
VPS26A-203ENST00000395098 PAK3O75914 559 aaPredicted RBP17.58■□□□□ 0.41
VPS26A-203ENST00000395098 NUTM2GQ5VZR2 741 aa17.58■□□□□ 0.4
VPS26A-203ENST00000395098 EMILIN1Q9Y6C2 1016 aa17.57■□□□□ 0.4
VPS26A-203ENST00000395098 RRS1Q15050 365 aaKnown RBP17.57■□□□□ 0.4
VPS26A-203ENST00000395098 WDR43Q15061 677 aaKnown RBP eCLIP17.57■□□□□ 0.4
VPS26A-203ENST00000395098 DDX17Q92841 729 aaKnown RBP17.57■□□□□ 0.4
VPS26A-203ENST00000395098 USP31Q70CQ4 1352 aa17.57■□□□□ 0.4
VPS26A-203ENST00000395098 AATKQ6ZMQ8 1374 aa17.56■□□□□ 0.4
VPS26A-203ENST00000395098 ABTB2Q8N961 1025 aa17.56■□□□□ 0.4
VPS26A-203ENST00000395098 NLRP6P59044 892 aa17.55■□□□□ 0.4
VPS26A-203ENST00000395098 CFAP53Q96M91 514 aa17.55■□□□□ 0.4
VPS26A-203ENST00000395098 COL3A1P02461 1466 aaPredicted RBP17.55■□□□□ 0.4
VPS26A-203ENST00000395098 SHPRHQ149N8 1683 aa17.55■□□□□ 0.4
VPS26A-203ENST00000395098 BLMP54132 1417 aaPredicted RBP17.55■□□□□ 0.4
VPS26A-203ENST00000395098 PPM1GO15355 546 aaPredicted RBP17.55■□□□□ 0.4
VPS26A-203ENST00000395098 KIF1AQ12756 1690 aa17.54■□□□□ 0.4
VPS26A-203ENST00000395098 PNPLA6Q8IY17 1366 aa17.54■□□□□ 0.4
VPS26A-203ENST00000395098 SOX12O15370 315 aa17.54■□□□□ 0.4
VPS26A-203ENST00000395098 KRT28Q7Z3Y7 464 aa17.53■□□□□ 0.4
VPS26A-203ENST00000395098 LTBP4Q8N2S1 1624 aa17.53■□□□□ 0.4
VPS26A-203ENST00000395098 SMG6Q86US8 1419 aaKnown RBP17.53■□□□□ 0.4
VPS26A-203ENST00000395098 SLAIN2Q9P270 581 aa17.53■□□□□ 0.4
VPS26A-203ENST00000395098 INSRP06213 1382 aa17.53■□□□□ 0.4
VPS26A-203ENST00000395098 BRINP3Q76B58 766 aa17.52■□□□□ 0.4
VPS26A-203ENST00000395098 MARF1Q9Y4F3 1742 aaKnown RBP17.52■□□□□ 0.4
VPS26A-203ENST00000395098 MAP2P11137 1827 aaKnown RBP17.52■□□□□ 0.4
VPS26A-203ENST00000395098 ZBED9Q6R2W3 1325 aa17.51■□□□□ 0.39
VPS26A-203ENST00000395098 TRPM3Q9HCF6 1732 aaPredicted RBP17.5■□□□□ 0.39
VPS26A-203ENST00000395098 CCDC146Q8IYE0 955 aa17.5■□□□□ 0.39
VPS26A-203ENST00000395098 CDK12Q9NYV4 1490 aaPredicted RBP17.49■□□□□ 0.39
VPS26A-203ENST00000395098 USP54Q70EL1 1684 aa17.49■□□□□ 0.39
VPS26A-203ENST00000395098 DIAPH1O60610 1272 aaKnown RBP17.48■□□□□ 0.39
VPS26A-203ENST00000395098 AEBP2Q6ZN18 517 aaPredicted RBP17.48■□□□□ 0.39
VPS26A-203ENST00000395098 SALL2Q9Y467 1007 aaPredicted RBP17.48■□□□□ 0.39
VPS26A-203ENST00000395098 MAP3K19Q56UN5 1328 aa17.48■□□□□ 0.39
VPS26A-203ENST00000395098 NPHP3Q7Z494 1330 aa17.48■□□□□ 0.39
VPS26A-203ENST00000395098 LMOD2Q6P5Q4 547 aa17.47■□□□□ 0.39
VPS26A-203ENST00000395098 U2AF1L5P0DN76 240 aaPredicted RBP17.47■□□□□ 0.39
VPS26A-203ENST00000395098 U2AF1Q01081 240 aaKnown RBP eCLIP17.47■□□□□ 0.39
VPS26A-203ENST00000395098 PEAK1Q9H792 1746 aa17.47■□□□□ 0.39
VPS26A-203ENST00000395098 U2SURPO15042 1029 aaKnown RBP17.46■□□□□ 0.39
VPS26A-203ENST00000395098 PXDNQ92626 1479 aa17.46■□□□□ 0.39
VPS26A-203ENST00000395098 PLEKHG5O94827 1062 aa17.46■□□□□ 0.39
VPS26A-203ENST00000395098 IL13P35225 146 aa17.45■□□□□ 0.38
VPS26A-203ENST00000395098 NUDCQ9Y266 331 aa17.45■□□□□ 0.38
VPS26A-203ENST00000395098 HSP90AB2PQ58FF8 381 aa17.44■□□□□ 0.38
VPS26A-203ENST00000395098 ALS2Q96Q42 1657 aa17.44■□□□□ 0.38
VPS26A-203ENST00000395098 APAF1O14727 1248 aa17.43■□□□□ 0.38
VPS26A-203ENST00000395098 SBNO1A3KN83 1393 aa17.43■□□□□ 0.38
VPS26A-203ENST00000395098 NFAT5O94916 1531 aa17.42■□□□□ 0.38
VPS26A-203ENST00000395098 USP19O94966 1318 aa17.42■□□□□ 0.38
VPS26A-203ENST00000395098 EIF4A2Q14240 407 aaKnown RBP17.41■□□□□ 0.38
VPS26A-203ENST00000395098 SPATA31A3Q5VYP0 1347 aa17.41■□□□□ 0.38
VPS26A-203ENST00000395098 GCP02774 474 aa17.41■□□□□ 0.38
VPS26A-203ENST00000395098 SLIT3O75094 1523 aa17.41■□□□□ 0.38
VPS26A-203ENST00000395098 TNS3Q68CZ2 1445 aa17.41■□□□□ 0.38
VPS26A-203ENST00000395098 FLT4P35916 1363 aa17.41■□□□□ 0.38
VPS26A-203ENST00000395098 SOS2Q07890 1332 aaPredicted RBP17.41■□□□□ 0.38
VPS26A-203ENST00000395098 AMPHP49418 695 aa17.4■□□□□ 0.38
VPS26A-203ENST00000395098 RUNDC1Q96C34 613 aa17.4■□□□□ 0.38
VPS26A-203ENST00000395098 PLEKHF1Q96S99 279 aa17.4■□□□□ 0.38
VPS26A-203ENST00000395098 MED1Q15648 1581 aaPredicted RBP17.4■□□□□ 0.38
VPS26A-203ENST00000395098 KCNH5Q8NCM2 988 aa17.39■□□□□ 0.38
VPS26A-203ENST00000395098 HOXC9P31274 260 aa17.39■□□□□ 0.37
VPS26A-203ENST00000395098 HMOX1P09601 288 aa17.38■□□□□ 0.37
VPS26A-203ENST00000395098 IQSEC2Q5JU85 1478 aa17.38■□□□□ 0.37
VPS26A-203ENST00000395098 TCP11L2Q8N4U5 519 aa17.37■□□□□ 0.37
VPS26A-203ENST00000395098 CABLES1Q8TDN4 633 aa17.37■□□□□ 0.37
VPS26A-203ENST00000395098 RSPH6AQ9H0K4 717 aa17.37■□□□□ 0.37
VPS26A-203ENST00000395098 RRP7AQ9Y3A4 280 aaKnown RBP17.37■□□□□ 0.37
VPS26A-203ENST00000395098 KIF24Q5T7B8 1368 aa17.36■□□□□ 0.37
VPS26A-203ENST00000395098 ZBTB7CA1YPR0 619 aa17.36■□□□□ 0.37
VPS26A-203ENST00000395098 FCHSD2O94868 740 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms