RNA–Protein interactions for RNA: ENST00000394858.6

TGFB1I1-202, transforming growth factor beta 1 induced transcript 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFB1I1, Length 1,803 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1I1-202ENST00000394858 TTC21BQ7Z4L5 1316 aa20.71■□□□□ 0.91
TGFB1I1-202ENST00000394858 NME9Q86XW9 330 aa20.7■□□□□ 0.9
TGFB1I1-202ENST00000394858 NGDNQ8NEJ9 315 aaKnown RBP20.7■□□□□ 0.9
TGFB1I1-202ENST00000394858 MSH6P52701 1360 aa20.68■□□□□ 0.9
TGFB1I1-202ENST00000394858 ESCO1Q5FWF5 840 aa20.68■□□□□ 0.9
TGFB1I1-202ENST00000394858 ORAI2Q96SN7 254 aa20.68■□□□□ 0.9
TGFB1I1-202ENST00000394858 ATF3P18847 181 aa20.67■□□□□ 0.9
TGFB1I1-202ENST00000394858 CADPS2Q86UW7 1296 aa20.67■□□□□ 0.9
TGFB1I1-202ENST00000394858 TTC21AQ8NDW8 1320 aa20.67■□□□□ 0.9
TGFB1I1-202ENST00000394858 ZRANB1Q9UGI0 708 aa20.67■□□□□ 0.9
TGFB1I1-202ENST00000394858 KIF1AQ12756 1690 aa20.66■□□□□ 0.9
TGFB1I1-202ENST00000394858 TNNT2P45379 298 aaPredicted RBP20.66■□□□□ 0.9
TGFB1I1-202ENST00000394858 FAM9BQ8IZU0 186 aa20.66■□□□□ 0.9
TGFB1I1-202ENST00000394858 OVOS2A0A0J9YW53 1432 aa20.65■□□□□ 0.9
TGFB1I1-202ENST00000394858 OVOS2Q6IE36 1432 aa20.65■□□□□ 0.9
TGFB1I1-202ENST00000394858 SCAF1Q9H7N4 1312 aaKnown RBP20.65■□□□□ 0.9
TGFB1I1-202ENST00000394858 PIK3C2AO00443 1686 aa20.64■□□□□ 0.9
TGFB1I1-202ENST00000394858 LTBP4Q8N2S1 1624 aa20.64■□□□□ 0.89
TGFB1I1-202ENST00000394858 USP31Q70CQ4 1352 aa20.63■□□□□ 0.89
TGFB1I1-202ENST00000394858 USP54Q70EL1 1684 aa20.62■□□□□ 0.89
TGFB1I1-202ENST00000394858 MTHFSP49914 203 aa20.62■□□□□ 0.89
TGFB1I1-202ENST00000394858 COG3Q96JB2 828 aa20.61■□□□□ 0.89
TGFB1I1-202ENST00000394858 MARF1Q9Y4F3 1742 aaKnown RBP20.61■□□□□ 0.89
TGFB1I1-202ENST00000394858 AATKQ6ZMQ8 1374 aa20.61■□□□□ 0.89
TGFB1I1-202ENST00000394858 TRPM3Q9HCF6 1732 aaPredicted RBP20.59■□□□□ 0.89
TGFB1I1-202ENST00000394858 SHPRHQ149N8 1683 aa20.59■□□□□ 0.89
TGFB1I1-202ENST00000394858 SMG6Q86US8 1419 aaKnown RBP20.58■□□□□ 0.89
TGFB1I1-202ENST00000394858 FOXO3O43524 673 aa20.58■□□□□ 0.89
TGFB1I1-202ENST00000394858 INSRP06213 1382 aa20.58■□□□□ 0.89
TGFB1I1-202ENST00000394858 MAP2P11137 1827 aaKnown RBP20.58■□□□□ 0.88
TGFB1I1-202ENST00000394858 COL3A1P02461 1466 aaPredicted RBP20.57■□□□□ 0.88
TGFB1I1-202ENST00000394858 FBLN1P23142 703 aa20.57■□□□□ 0.88
TGFB1I1-202ENST00000394858 PSME1Q06323 249 aa20.57■□□□□ 0.88
TGFB1I1-202ENST00000394858 PNPLA6Q8IY17 1366 aa20.57■□□□□ 0.88
TGFB1I1-202ENST00000394858 POLKQ9UBT6 870 aa20.57■□□□□ 0.88
TGFB1I1-202ENST00000394858 BLMP54132 1417 aaPredicted RBP20.54■□□□□ 0.88
TGFB1I1-202ENST00000394858 SLAIN2Q9P270 581 aa20.54■□□□□ 0.88
TGFB1I1-202ENST00000394858 ADAMTS8Q9UP79 889 aa20.54■□□□□ 0.88
TGFB1I1-202ENST00000394858 BRINP3Q76B58 766 aa20.53■□□□□ 0.88
TGFB1I1-202ENST00000394858 HNRNPUQ00839 825 aaKnown RBP eCLIP20.53■□□□□ 0.88
TGFB1I1-202ENST00000394858 ABTB2Q8N961 1025 aa20.53■□□□□ 0.88
TGFB1I1-202ENST00000394858 PAK3O75914 559 aaPredicted RBP20.52■□□□□ 0.88
TGFB1I1-202ENST00000394858 XPCQ01831 940 aaPredicted RBP20.52■□□□□ 0.88
TGFB1I1-202ENST00000394858 KRT28Q7Z3Y7 464 aa20.52■□□□□ 0.88
TGFB1I1-202ENST00000394858 PXDNQ92626 1479 aa20.51■□□□□ 0.87
TGFB1I1-202ENST00000394858 CDK12Q9NYV4 1490 aaPredicted RBP20.51■□□□□ 0.87
TGFB1I1-202ENST00000394858 NLRP6P59044 892 aa20.51■□□□□ 0.87
TGFB1I1-202ENST00000394858 CFAP53Q96M91 514 aa20.51■□□□□ 0.87
TGFB1I1-202ENST00000394858 EMILIN1Q9Y6C2 1016 aa20.51■□□□□ 0.87
TGFB1I1-202ENST00000394858 ALS2Q96Q42 1657 aa20.51■□□□□ 0.87
TGFB1I1-202ENST00000394858 AEBP2Q6ZN18 517 aaPredicted RBP20.5■□□□□ 0.87
TGFB1I1-202ENST00000394858 WDR43Q15061 677 aaKnown RBP eCLIP20.5■□□□□ 0.87
TGFB1I1-202ENST00000394858 NPHP3Q7Z494 1330 aa20.5■□□□□ 0.87
TGFB1I1-202ENST00000394858 CENPBP07199 599 aaPredicted RBP20.49■□□□□ 0.87
TGFB1I1-202ENST00000394858 RRS1Q15050 365 aaKnown RBP20.49■□□□□ 0.87
TGFB1I1-202ENST00000394858 DDX17Q92841 729 aaKnown RBP20.49■□□□□ 0.87
TGFB1I1-202ENST00000394858 PEAK1Q9H792 1746 aa20.48■□□□□ 0.87
TGFB1I1-202ENST00000394858 SBNO1A3KN83 1393 aa20.48■□□□□ 0.87
TGFB1I1-202ENST00000394858 NUTM2GQ5VZR2 741 aa20.48■□□□□ 0.87
TGFB1I1-202ENST00000394858 NFAT5O94916 1531 aa20.47■□□□□ 0.87
TGFB1I1-202ENST00000394858 ZBED9Q6R2W3 1325 aa20.46■□□□□ 0.87
TGFB1I1-202ENST00000394858 SLIT3O75094 1523 aa20.46■□□□□ 0.87
TGFB1I1-202ENST00000394858 USP19O94966 1318 aa20.44■□□□□ 0.86
TGFB1I1-202ENST00000394858 MAP3K19Q56UN5 1328 aa20.44■□□□□ 0.86
TGFB1I1-202ENST00000394858 PPM1GO15355 546 aaPredicted RBP20.44■□□□□ 0.86
TGFB1I1-202ENST00000394858 NHSL1Q5SYE7 1610 aa20.44■□□□□ 0.86
TGFB1I1-202ENST00000394858 SOS2Q07890 1332 aaPredicted RBP20.43■□□□□ 0.86
TGFB1I1-202ENST00000394858 TNS3Q68CZ2 1445 aa20.43■□□□□ 0.86
TGFB1I1-202ENST00000394858 DIAPH1O60610 1272 aaKnown RBP20.43■□□□□ 0.86
TGFB1I1-202ENST00000394858 SOX12O15370 315 aa20.42■□□□□ 0.86
TGFB1I1-202ENST00000394858 IL13P35225 146 aa20.41■□□□□ 0.86
TGFB1I1-202ENST00000394858 MED1Q15648 1581 aaPredicted RBP20.41■□□□□ 0.86
TGFB1I1-202ENST00000394858 SPATA31A3Q5VYP0 1347 aa20.41■□□□□ 0.86
TGFB1I1-202ENST00000394858 KIF24Q5T7B8 1368 aa20.41■□□□□ 0.86
TGFB1I1-202ENST00000394858 NUDCQ9Y266 331 aa20.4■□□□□ 0.86
TGFB1I1-202ENST00000394858 PHRF1Q9P1Y6 1649 aaKnown RBP20.4■□□□□ 0.86
TGFB1I1-202ENST00000394858 LTN1O94822 1766 aa20.39■□□□□ 0.85
TGFB1I1-202ENST00000394858 FLT4P35916 1363 aa20.39■□□□□ 0.85
TGFB1I1-202ENST00000394858 CRYBG1Q9Y4K1 1723 aa20.39■□□□□ 0.85
TGFB1I1-202ENST00000394858 KCNH5Q8NCM2 988 aa20.39■□□□□ 0.85
TGFB1I1-202ENST00000394858 ROBO1Q9Y6N7 1651 aa20.38■□□□□ 0.85
TGFB1I1-202ENST00000394858 SENP3-EIF4A1A0A087X0R7 540 aa20.38■□□□□ 0.85
TGFB1I1-202ENST00000394858 U2AF1L5P0DN76 240 aaPredicted RBP20.38■□□□□ 0.85
TGFB1I1-202ENST00000394858 U2AF1Q01081 240 aaKnown RBP eCLIP20.38■□□□□ 0.85
TGFB1I1-202ENST00000394858 HSP90AB2PQ58FF8 381 aa20.38■□□□□ 0.85
TGFB1I1-202ENST00000394858 CCDC146Q8IYE0 955 aa20.38■□□□□ 0.85
TGFB1I1-202ENST00000394858 GCP02774 474 aa20.37■□□□□ 0.85
TGFB1I1-202ENST00000394858 LMOD2Q6P5Q4 547 aa20.37■□□□□ 0.85
TGFB1I1-202ENST00000394858 RTL1A6NKG5 1358 aa20.36■□□□□ 0.85
TGFB1I1-202ENST00000394858 ARHGEF10O15013 1369 aa20.36■□□□□ 0.85
TGFB1I1-202ENST00000394858 RGPD1P0DJD0 1748 aa20.36■□□□□ 0.85
TGFB1I1-202ENST00000394858 U2SURPO15042 1029 aaKnown RBP20.36■□□□□ 0.85
TGFB1I1-202ENST00000394858 EIF4A2Q14240 407 aaKnown RBP20.36■□□□□ 0.85
TGFB1I1-202ENST00000394858 IQSEC2Q5JU85 1478 aa20.36■□□□□ 0.85
TGFB1I1-202ENST00000394858 AHDC1Q5TGY3 1603 aaPredicted RBP20.35■□□□□ 0.85
TGFB1I1-202ENST00000394858 HOXC9P31274 260 aa20.34■□□□□ 0.85
TGFB1I1-202ENST00000394858 PLEKHF1Q96S99 279 aa20.34■□□□□ 0.85
TGFB1I1-202ENST00000394858 AMPHP49418 695 aa20.34■□□□□ 0.85
TGFB1I1-202ENST00000394858 RUNDC1Q96C34 613 aa20.34■□□□□ 0.85
TGFB1I1-202ENST00000394858 ARHGEF25Q86VW2 580 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms