RNA–Protein interactions for RNA: ENST00000394825.5

NR4A1-204, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NR4A1, Length 2,528 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-204ENST00000394825 CDCA8Q53HL2 280 aa20.35■□□□□ 0.85
NR4A1-204ENST00000394825 TRMT2AQ8IZ69 625 aaKnown RBP20.35■□□□□ 0.85
NR4A1-204ENST00000394825 DISP3Q9P2K9 1392 aa20.35■□□□□ 0.85
NR4A1-204ENST00000394825 SPRYD3Q8NCJ5 442 aa20.34■□□□□ 0.85
NR4A1-204ENST00000394825 DMTNQ08495 405 aa20.33■□□□□ 0.85
NR4A1-204ENST00000394825 ADAMTS8Q9UP79 889 aa20.33■□□□□ 0.85
NR4A1-204ENST00000394825 PTMSP20962 102 aa20.33■□□□□ 0.84
NR4A1-204ENST00000394825 KDM5AP29375 1690 aaKnown RBP20.33■□□□□ 0.84
NR4A1-204ENST00000394825 NCOA3Q9Y6Q9 1424 aa20.33■□□□□ 0.84
NR4A1-204ENST00000394825 NCLP19338 710 aaKnown RBP20.32■□□□□ 0.84
NR4A1-204ENST00000394825 HS1BP3Q53T59 392 aa20.32■□□□□ 0.84
NR4A1-204ENST00000394825 SBNO2Q9Y2G9 1366 aa20.32■□□□□ 0.84
NR4A1-204ENST00000394825 DYNC1I1O14576 645 aa20.32■□□□□ 0.84
NR4A1-204ENST00000394825 PDE3AQ14432 1141 aa20.32■□□□□ 0.84
NR4A1-204ENST00000394825 NINLQ9Y2I6 1382 aa20.32■□□□□ 0.84
NR4A1-204ENST00000394825 DDIT3P35638 169 aa20.31■□□□□ 0.84
NR4A1-204ENST00000394825 CLUAP1Q96AJ1 413 aa20.31■□□□□ 0.84
NR4A1-204ENST00000394825 NKTRP30414 1462 aaKnown RBP20.31■□□□□ 0.84
NR4A1-204ENST00000394825 R3HCC1Q9Y3T6 440 aaKnown RBP20.3■□□□□ 0.84
NR4A1-204ENST00000394825 A2ML1A8K2U0 1454 aa20.3■□□□□ 0.84
NR4A1-204ENST00000394825 ZNF500O60304 480 aaPredicted RBP20.3■□□□□ 0.84
NR4A1-204ENST00000394825 ZHX1Q9UKY1 873 aaPredicted RBP20.29■□□□□ 0.84
NR4A1-204ENST00000394825 UQCRHLA0A096LP55 91 aa20.28■□□□□ 0.84
NR4A1-204ENST00000394825 UQCRHP07919 91 aa20.28■□□□□ 0.84
NR4A1-204ENST00000394825 NASPP49321 788 aaPredicted RBP20.28■□□□□ 0.84
NR4A1-204ENST00000394825 CC2D1BQ5T0F9 858 aaKnown RBP20.28■□□□□ 0.84
NR4A1-204ENST00000394825 ANP32BQ92688 251 aaKnown RBP20.28■□□□□ 0.84
NR4A1-204ENST00000394825 STAG3Q9UJ98 1225 aa20.28■□□□□ 0.84
NR4A1-204ENST00000394825 IBTKQ9P2D0 1353 aaPredicted RBP20.27■□□□□ 0.84
NR4A1-204ENST00000394825 GBP4Q96PP9 640 aa20.26■□□□□ 0.83
NR4A1-204ENST00000394825 CIZ1Q9ULV3 898 aaPredicted RBP20.26■□□□□ 0.83
NR4A1-204ENST00000394825 TNRQ92752 1358 aa20.26■□□□□ 0.83
NR4A1-204ENST00000394825 BCAR3O75815 825 aa20.25■□□□□ 0.83
NR4A1-204ENST00000394825 C22orf23Q9BZE7 217 aa20.25■□□□□ 0.83
NR4A1-204ENST00000394825 PMFBP1Q8TBY8 1022 aa20.25■□□□□ 0.83
NR4A1-204ENST00000394825 NOL7Q9UMY1 257 aaKnown RBP20.25■□□□□ 0.83
NR4A1-204ENST00000394825 QRICH2Q9H0J4 1663 aa20.25■□□□□ 0.83
NR4A1-204ENST00000394825 FER1L4A9Z1Z3 1794 aa20.25■□□□□ 0.83
NR4A1-204ENST00000394825 ZSCAN20P17040 1043 aaPredicted RBP20.24■□□□□ 0.83
NR4A1-204ENST00000394825 CCDC94Q9BW85 323 aaPredicted RBP20.24■□□□□ 0.83
NR4A1-204ENST00000394825 HSCBQ8IWL3 235 aa20.24■□□□□ 0.83
NR4A1-204ENST00000394825 TNPO1Q92973 898 aaKnown RBP20.24■□□□□ 0.83
NR4A1-204ENST00000394825 ARHGEF28Q8N1W1 1705 aaKnown RBP20.24■□□□□ 0.83
NR4A1-204ENST00000394825 BBXQ8WY36 941 aaPredicted RBP20.23■□□□□ 0.83
NR4A1-204ENST00000394825 RIMS2Q9UQ26 1411 aa20.22■□□□□ 0.83
NR4A1-204ENST00000394825 GTF2E1P29083 439 aaPredicted RBP20.22■□□□□ 0.83
NR4A1-204ENST00000394825 WDR43Q15061 677 aaKnown RBP eCLIP20.22■□□□□ 0.83
NR4A1-204ENST00000394825 CSPP1Q1MSJ5 1256 aa20.22■□□□□ 0.83
NR4A1-204ENST00000394825 MYOM1P52179 1685 aa20.21■□□□□ 0.83
NR4A1-204ENST00000394825 PRDM10Q9NQV6 1147 aa20.21■□□□□ 0.83
NR4A1-204ENST00000394825 RAB3GAP1Q15042 981 aa20.2■□□□□ 0.82
NR4A1-204ENST00000394825 SMC5Q8IY18 1101 aa20.2■□□□□ 0.82
NR4A1-204ENST00000394825 C3P01024 1663 aa20.2■□□□□ 0.82
NR4A1-204ENST00000394825 ALKQ9UM73 1620 aa20.2■□□□□ 0.82
NR4A1-204ENST00000394825 ASXL1Q8IXJ9 1541 aa20.2■□□□□ 0.82
NR4A1-204ENST00000394825 UBR1Q8IWV7 1749 aa20.2■□□□□ 0.82
NR4A1-204ENST00000394825 KIF20AO95235 890 aa20.2■□□□□ 0.82
NR4A1-204ENST00000394825 NUTM2DQ5VT03 806 aaPredicted RBP20.2■□□□□ 0.82
NR4A1-204ENST00000394825 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.2■□□□□ 0.82
NR4A1-204ENST00000394825 PDZRN3Q9UPQ7 1066 aa20.19■□□□□ 0.82
NR4A1-204ENST00000394825 GTPBP4Q9BZE4 634 aaKnown RBP20.19■□□□□ 0.82
NR4A1-204ENST00000394825 SNX21Q969T3 373 aa20.18■□□□□ 0.82
NR4A1-204ENST00000394825 TRAK1Q9UPV9 953 aa20.18■□□□□ 0.82
NR4A1-204ENST00000394825 TNNT2P45379 298 aaPredicted RBP20.18■□□□□ 0.82
NR4A1-204ENST00000394825 HDGFP51858 240 aaKnown RBP20.18■□□□□ 0.82
NR4A1-204ENST00000394825 TMEM132EQ6IEE7 984 aa20.18■□□□□ 0.82
NR4A1-204ENST00000394825 PANK3Q9H999 370 aa20.18■□□□□ 0.82
NR4A1-204ENST00000394825 E9PSI1 815 aa20.17■□□□□ 0.82
NR4A1-204ENST00000394825 MCM5P33992 734 aa20.17■□□□□ 0.82
NR4A1-204ENST00000394825 SASS6Q6UVJ0 657 aa20.17■□□□□ 0.82
NR4A1-204ENST00000394825 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.17■□□□□ 0.82
NR4A1-204ENST00000394825 PDIA4P13667 645 aaKnown RBP20.17■□□□□ 0.82
NR4A1-204ENST00000394825 CANXP27824 592 aaKnown RBP20.17■□□□□ 0.82
NR4A1-204ENST00000394825 PDLIM2Q96JY6 352 aa20.17■□□□□ 0.82
NR4A1-204ENST00000394825 BCL11BQ9C0K0 894 aaPredicted RBP20.17■□□□□ 0.82
NR4A1-204ENST00000394825 COG6Q9Y2V7 657 aa20.17■□□□□ 0.82
NR4A1-204ENST00000394825 SPINK5Q9NQ38 1064 aaPredicted RBP20.16■□□□□ 0.82
NR4A1-204ENST00000394825 SETD1AO15047 1707 aaKnown RBP20.15■□□□□ 0.82
NR4A1-204ENST00000394825 PPP4R3BQ5MIZ7 849 aa20.15■□□□□ 0.82
NR4A1-204ENST00000394825 PUS7Q96PZ0 661 aaKnown RBP20.15■□□□□ 0.82
NR4A1-204ENST00000394825 XPCQ01831 940 aaPredicted RBP20.15■□□□□ 0.82
NR4A1-204ENST00000394825 PANK1Q8TE04 598 aa20.14■□□□□ 0.82
NR4A1-204ENST00000394825 YTHDC2Q9H6S0 1430 aaKnown RBP20.14■□□□□ 0.81
NR4A1-204ENST00000394825 PPP2R1AP30153 589 aa20.13■□□□□ 0.81
NR4A1-204ENST00000394825 KLHL40Q2TBA0 621 aa20.13■□□□□ 0.81
NR4A1-204ENST00000394825 ZKSCAN5Q9Y2L8 839 aa20.13■□□□□ 0.81
NR4A1-204ENST00000394825 LETM1O95202 739 aaPredicted RBP20.12■□□□□ 0.81
NR4A1-204ENST00000394825 MFAP1P55081 439 aaKnown RBP20.12■□□□□ 0.81
NR4A1-204ENST00000394825 ZNF445P59923 1031 aa20.12■□□□□ 0.81
NR4A1-204ENST00000394825 CLEC17AQ6ZS10 378 aa20.12■□□□□ 0.81
NR4A1-204ENST00000394825 PCDHB15Q9Y5E8 787 aa20.12■□□□□ 0.81
NR4A1-204ENST00000394825 DLC1Q96QB1 1528 aa20.12■□□□□ 0.81
NR4A1-204ENST00000394825 NRXN3Q9Y4C0 1643 aa20.11■□□□□ 0.81
NR4A1-204ENST00000394825 PTPRMP28827 1452 aa20.11■□□□□ 0.81
NR4A1-204ENST00000394825 TMEM2Q9UHN6 1383 aa20.11■□□□□ 0.81
NR4A1-204ENST00000394825 NGEFQ8N5V2 710 aa20.11■□□□□ 0.81
NR4A1-204ENST00000394825 ARID3AQ99856 593 aa20.1■□□□□ 0.81
NR4A1-204ENST00000394825 RWDD1Q9H446 243 aaPredicted RBP20.1■□□□□ 0.81
NR4A1-204ENST00000394825 NAP1L2Q9ULW6 460 aaPredicted RBP20.1■□□□□ 0.81
NR4A1-204ENST00000394825 NPC1L1Q9UHC9 1359 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms