RNA–Protein interactions for RNA: ENST00000394546.6

TRPT1-202, Transcript of tRNA phosphotransferase 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TRPT1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPT1-202ENST00000394546 SLC24A1O60721 1099 aa26.59■■□□□ 1.85
TRPT1-202ENST00000394546 CABP1Q9NZU7 370 aa26.59■■□□□ 1.85
TRPT1-202ENST00000394546 TOPAZ1Q8N9V7 1692 aa26.59■■□□□ 1.85
TRPT1-202ENST00000394546 CCER1Q8TC90 406 aaPredicted RBP26.58■■□□□ 1.85
TRPT1-202ENST00000394546 BRD4O60885 1362 aaPredicted RBP26.58■■□□□ 1.84
TRPT1-202ENST00000394546 CDK12Q9NYV4 1490 aaPredicted RBP26.57■■□□□ 1.84
TRPT1-202ENST00000394546 ATAD2Q6PL18 1390 aa26.57■■□□□ 1.84
TRPT1-202ENST00000394546 MARF1Q9Y4F3 1742 aaKnown RBP26.56■■□□□ 1.84
TRPT1-202ENST00000394546 UNC5CLQ8IV45 518 aa26.55■■□□□ 1.84
TRPT1-202ENST00000394546 ALS2Q96Q42 1657 aa26.54■■□□□ 1.84
TRPT1-202ENST00000394546 ABTB2Q8N961 1025 aa26.54■■□□□ 1.84
TRPT1-202ENST00000394546 ZNF692Q9BU19 519 aaPredicted RBP26.54■■□□□ 1.84
TRPT1-202ENST00000394546 BCL9LQ86UU0 1499 aa26.53■■□□□ 1.84
TRPT1-202ENST00000394546 ATRNO75882 1429 aa26.52■■□□□ 1.84
TRPT1-202ENST00000394546 SLIT2O94813 1529 aa26.5■■□□□ 1.83
TRPT1-202ENST00000394546 FAM83GA6ND36 823 aa26.49■■□□□ 1.83
TRPT1-202ENST00000394546 NUTM2GQ5VZR2 741 aa26.48■■□□□ 1.83
TRPT1-202ENST00000394546 NLRP13Q86W25 1043 aa26.48■■□□□ 1.83
TRPT1-202ENST00000394546 GJD4Q96KN9 370 aaPredicted RBP26.48■■□□□ 1.83
TRPT1-202ENST00000394546 PUS7Q96PZ0 661 aaKnown RBP26.48■■□□□ 1.83
TRPT1-202ENST00000394546 ST20-MTHFSA0A0A6YYL1 179 aa26.47■■□□□ 1.83
TRPT1-202ENST00000394546 PRDM11Q9NQV5 511 aa26.46■■□□□ 1.83
TRPT1-202ENST00000394546 USP6P35125 1406 aa26.46■■□□□ 1.83
TRPT1-202ENST00000394546 ABCA3Q99758 1704 aa26.45■■□□□ 1.83
TRPT1-202ENST00000394546 VPS72Q15906 364 aa26.44■■□□□ 1.82
TRPT1-202ENST00000394546 CCDC9Q9Y3X0 531 aaKnown RBP26.43■■□□□ 1.82
TRPT1-202ENST00000394546 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.42■■□□□ 1.82
TRPT1-202ENST00000394546 RGS12O14924 1447 aa26.42■■□□□ 1.82
TRPT1-202ENST00000394546 TMC1Q8TDI8 760 aa26.42■■□□□ 1.82
TRPT1-202ENST00000394546 BTG4Q9NY30 223 aa26.42■■□□□ 1.82
TRPT1-202ENST00000394546 NLRP6P59044 892 aa26.41■■□□□ 1.82
TRPT1-202ENST00000394546 TESK2Q96S53 571 aa26.41■■□□□ 1.82
TRPT1-202ENST00000394546 USP47Q96K76 1375 aa26.41■■□□□ 1.82
TRPT1-202ENST00000394546 NWD2Q9ULI1 1742 aa26.4■■□□□ 1.82
TRPT1-202ENST00000394546 HDGFL2Q7Z4V5 671 aaPredicted RBP26.4■■□□□ 1.82
TRPT1-202ENST00000394546 USP19O94966 1318 aa26.39■■□□□ 1.82
TRPT1-202ENST00000394546 TTC21AQ8NDW8 1320 aa26.39■■□□□ 1.82
TRPT1-202ENST00000394546 KTN1Q86UP2 1357 aaKnown RBP26.39■■□□□ 1.82
TRPT1-202ENST00000394546 KIAA0232Q92628 1395 aa26.39■■□□□ 1.82
TRPT1-202ENST00000394546 ZC3H6P61129 1189 aaKnown RBP26.39■■□□□ 1.82
TRPT1-202ENST00000394546 TTC21BQ7Z4L5 1316 aa26.39■■□□□ 1.81
TRPT1-202ENST00000394546 COL14A1Q05707 1796 aaKnown RBP26.38■■□□□ 1.81
TRPT1-202ENST00000394546 TERF2IPQ9NYB0 399 aa26.38■■□□□ 1.81
TRPT1-202ENST00000394546 CPSF1Q10570 1443 aaKnown RBP26.38■■□□□ 1.81
TRPT1-202ENST00000394546 SSH2Q76I76 1423 aa26.38■■□□□ 1.81
TRPT1-202ENST00000394546 GCP02774 474 aa26.37■■□□□ 1.81
TRPT1-202ENST00000394546 TMF1P82094 1093 aa26.37■■□□□ 1.81
TRPT1-202ENST00000394546 PLCH1Q4KWH8 1693 aa26.36■■□□□ 1.81
TRPT1-202ENST00000394546 CDCA8Q53HL2 280 aa26.36■■□□□ 1.81
TRPT1-202ENST00000394546 CRYBG1Q9Y4K1 1723 aa26.36■■□□□ 1.81
TRPT1-202ENST00000394546 NINLQ9Y2I6 1382 aa26.35■■□□□ 1.81
TRPT1-202ENST00000394546 CPDO75976 1380 aa26.33■■□□□ 1.81
TRPT1-202ENST00000394546 PHRF1Q9P1Y6 1649 aaKnown RBP26.33■■□□□ 1.81
TRPT1-202ENST00000394546 CHRNA2Q15822 529 aa26.33■■□□□ 1.81
TRPT1-202ENST00000394546 SLC12A5Q9H2X9 1139 aa26.33■■□□□ 1.81
TRPT1-202ENST00000394546 EVA1CP58658 441 aa26.32■■□□□ 1.8
TRPT1-202ENST00000394546 KCNH5Q8NCM2 988 aa26.32■■□□□ 1.8
TRPT1-202ENST00000394546 UPF1Q92900 1129 aaKnown RBP eCLIP26.32■■□□□ 1.8
TRPT1-202ENST00000394546 AKAP12Q02952 1782 aa26.3■■□□□ 1.8
TRPT1-202ENST00000394546 ONECUT3O60422 494 aaPredicted RBP26.29■■□□□ 1.8
TRPT1-202ENST00000394546 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.28■■□□□ 1.8
TRPT1-202ENST00000394546 GLI3P10071 1580 aa26.28■■□□□ 1.8
TRPT1-202ENST00000394546 NRKQ7Z2Y5 1582 aa26.28■■□□□ 1.8
TRPT1-202ENST00000394546 SEPT12Q8IYM1 358 aa26.27■■□□□ 1.8
TRPT1-202ENST00000394546 STRN4Q9NRL3 753 aa26.27■■□□□ 1.8
TRPT1-202ENST00000394546 SPATA31A5Q5VU36 1347 aa26.27■■□□□ 1.8
TRPT1-202ENST00000394546 SPATA31A7Q8IWB4 1347 aa26.27■■□□□ 1.8
TRPT1-202ENST00000394546 NRAPQ86VF7 1730 aa26.25■■□□□ 1.79
TRPT1-202ENST00000394546 EDC4Q6P2E9 1401 aaKnown RBP26.25■■□□□ 1.79
TRPT1-202ENST00000394546 A0A0G2JS52 829 aa26.25■■□□□ 1.79
TRPT1-202ENST00000394546 ZBTB7CA1YPR0 619 aa26.25■■□□□ 1.79
TRPT1-202ENST00000394546 MYT1Q01538 1121 aa26.25■■□□□ 1.79
TRPT1-202ENST00000394546 PIK3C2AO00443 1686 aa26.25■■□□□ 1.79
TRPT1-202ENST00000394546 SLIT3O75094 1523 aa26.24■■□□□ 1.79
TRPT1-202ENST00000394546 CD163L1Q9NR16 1453 aa26.24■■□□□ 1.79
TRPT1-202ENST00000394546 A0A1W2PP64 1363 aa26.23■■□□□ 1.79
TRPT1-202ENST00000394546 FAM98CQ17RN3 349 aaKnown RBP26.23■■□□□ 1.79
TRPT1-202ENST00000394546 MON2Q7Z3U7 1717 aa26.22■■□□□ 1.79
TRPT1-202ENST00000394546 AATKQ6ZMQ8 1374 aa26.21■■□□□ 1.79
TRPT1-202ENST00000394546 USP31Q70CQ4 1352 aa26.21■■□□□ 1.79
TRPT1-202ENST00000394546 EIF4G2P78344 907 aaKnown RBP eCLIP26.21■■□□□ 1.79
TRPT1-202ENST00000394546 SPATA31A1Q5TZJ5 1347 aa26.2■■□□□ 1.79
TRPT1-202ENST00000394546 CCDC125Q86Z20 511 aa26.2■■□□□ 1.78
TRPT1-202ENST00000394546 KRT27Q7Z3Y8 459 aa26.19■■□□□ 1.78
TRPT1-202ENST00000394546 NME9Q86XW9 330 aa26.19■■□□□ 1.78
TRPT1-202ENST00000394546 ANKRD36BQ8N2N9 1353 aa26.19■■□□□ 1.78
TRPT1-202ENST00000394546 SOX12O15370 315 aa26.18■■□□□ 1.78
TRPT1-202ENST00000394546 ARHGEF25Q86VW2 580 aa26.18■■□□□ 1.78
TRPT1-202ENST00000394546 CAMTA1Q9Y6Y1 1673 aa26.17■■□□□ 1.78
TRPT1-202ENST00000394546 LARP1Q6PKG0 1096 aaKnown RBP26.16■■□□□ 1.78
TRPT1-202ENST00000394546 THRAP3Q9Y2W1 955 aaKnown RBP26.16■■□□□ 1.78
TRPT1-202ENST00000394546 USP35Q9P2H5 1018 aa26.15■■□□□ 1.78
TRPT1-202ENST00000394546 LMO7Q8WWI1 1683 aa26.15■■□□□ 1.78
TRPT1-202ENST00000394546 BARGINQ6ZT62 677 aa26.14■■□□□ 1.78
TRPT1-202ENST00000394546 TCP11L2Q8N4U5 519 aa26.14■■□□□ 1.78
TRPT1-202ENST00000394546 ZRANB1Q9UGI0 708 aa26.14■■□□□ 1.78
TRPT1-202ENST00000394546 COL5A2P05997 1499 aaPredicted RBP26.13■■□□□ 1.77
TRPT1-202ENST00000394546 COG3Q96JB2 828 aa26.13■■□□□ 1.77
TRPT1-202ENST00000394546 HSPA5P11021 654 aaKnown RBP26.1■■□□□ 1.77
TRPT1-202ENST00000394546 TOM1L2Q6ZVM7 507 aa26.1■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms