RNA–Protein interactions for RNA: ENST00000394121.8

THRA-202, Transcript of thyroid hormone receptor alpha, humanhuman

TSL 2 BASIC

Gene THRA, Length 2,260 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THRA-202ENST00000394121 SLC12A5Q9H2X9 1139 aa30.06■■■□□ 2.4
THRA-202ENST00000394121 DLC1Q96QB1 1528 aa30.05■■■□□ 2.4
THRA-202ENST00000394121 SRPK2P78362 688 aaKnown RBP30.05■■■□□ 2.4
THRA-202ENST00000394121 CGNL1Q0VF96 1302 aa30.04■■■□□ 2.4
THRA-202ENST00000394121 RGS3P49796 1198 aa30.03■■■□□ 2.4
THRA-202ENST00000394121 MORC1Q86VD1 984 aa30.03■■■□□ 2.4
THRA-202ENST00000394121 TECPR2O15040 1411 aa30.03■■■□□ 2.4
THRA-202ENST00000394121 CDK19Q9BWU1 502 aa30.01■■■□□ 2.39
THRA-202ENST00000394121 USP32Q8NFA0 1604 aa30■■■□□ 2.39
THRA-202ENST00000394121 DAXXQ9UER7 740 aaPredicted RBP30■■■□□ 2.39
THRA-202ENST00000394121 KCNA6P17658 529 aa29.99■■■□□ 2.39
THRA-202ENST00000394121 RUNDC1Q96C34 613 aa29.98■■■□□ 2.39
THRA-202ENST00000394121 CPS1P31327 1500 aa29.97■■■□□ 2.39
THRA-202ENST00000394121 IGHDP01880 384 aa29.97■■■□□ 2.39
THRA-202ENST00000394121 NPHP4O75161 1426 aaPredicted RBP29.97■■■□□ 2.39
THRA-202ENST00000394121 FAM135BQ49AJ0 1406 aa29.97■■■□□ 2.39
THRA-202ENST00000394121 RBM33Q96EV2 1170 aaKnown RBP29.96■■■□□ 2.39
THRA-202ENST00000394121 VIRMAQ69YN4 1812 aaKnown RBP29.96■■■□□ 2.39
THRA-202ENST00000394121 IQSEC2Q5JU85 1478 aa29.96■■■□□ 2.39
THRA-202ENST00000394121 CLUAP1Q96AJ1 413 aa29.94■■■□□ 2.38
THRA-202ENST00000394121 SIRT1Q96EB6 747 aa29.94■■■□□ 2.38
THRA-202ENST00000394121 CANXP27824 592 aaKnown RBP29.94■■■□□ 2.38
THRA-202ENST00000394121 SLC4A3P48751 1232 aa29.94■■■□□ 2.38
THRA-202ENST00000394121 KNDC1Q76NI1 1749 aa29.94■■■□□ 2.38
THRA-202ENST00000394121 PHF23Q9BUL5 403 aaPredicted RBP29.93■■■□□ 2.38
THRA-202ENST00000394121 DIP2AQ14689 1571 aa29.93■■■□□ 2.38
THRA-202ENST00000394121 WASLO00401 505 aaPredicted RBP29.91■■■□□ 2.38
THRA-202ENST00000394121 TNNT2P45379 298 aaPredicted RBP29.91■■■□□ 2.38
THRA-202ENST00000394121 WDR63Q8IWG1 891 aa29.91■■■□□ 2.38
THRA-202ENST00000394121 TCP11L2Q8N4U5 519 aa29.91■■■□□ 2.38
THRA-202ENST00000394121 NUTM2FA1L443 756 aa29.91■■■□□ 2.38
THRA-202ENST00000394121 PANK1Q8TE04 598 aa29.91■■■□□ 2.38
THRA-202ENST00000394121 COG6Q9Y2V7 657 aa29.91■■■□□ 2.38
THRA-202ENST00000394121 NFKBIBQ15653 356 aa29.9■■■□□ 2.38
THRA-202ENST00000394121 PUS7Q96PZ0 661 aaKnown RBP29.9■■■□□ 2.38
THRA-202ENST00000394121 RARSP54136 660 aaKnown RBP29.88■■■□□ 2.37
THRA-202ENST00000394121 AAMPQ13685 434 aa29.88■■■□□ 2.37
THRA-202ENST00000394121 NEUROD2Q15784 382 aa29.88■■■□□ 2.37
THRA-202ENST00000394121 MAPK8IP3Q9UPT6 1336 aa29.88■■■□□ 2.37
THRA-202ENST00000394121 LMTK3Q96Q04 1460 aa29.88■■■□□ 2.37
THRA-202ENST00000394121 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.87■■■□□ 2.37
THRA-202ENST00000394121 CCDC27Q2M243 656 aa29.87■■■□□ 2.37
THRA-202ENST00000394121 CFAP53Q96M91 514 aa29.87■■■□□ 2.37
THRA-202ENST00000394121 CABP1Q9NZU7 370 aa29.87■■■□□ 2.37
THRA-202ENST00000394121 RRP7AQ9Y3A4 280 aaKnown RBP29.87■■■□□ 2.37
THRA-202ENST00000394121 MTHFSP49914 203 aa29.87■■■□□ 2.37
THRA-202ENST00000394121 NCBP3Q53F19 620 aaKnown RBP29.85■■■□□ 2.37
THRA-202ENST00000394121 PTCH1Q13635 1447 aa29.85■■■□□ 2.37
THRA-202ENST00000394121 FRAT1Q92837 279 aaPredicted RBP29.84■■■□□ 2.37
THRA-202ENST00000394121 XRN1Q8IZH2 1706 aaKnown RBP29.84■■■□□ 2.37
THRA-202ENST00000394121 NSD2O96028 1365 aa29.84■■■□□ 2.37
THRA-202ENST00000394121 PIK3R4Q99570 1358 aa29.84■■■□□ 2.37
THRA-202ENST00000394121 ATAD2Q6PL18 1390 aa29.83■■■□□ 2.37
THRA-202ENST00000394121 ANKRD36BQ8N2N9 1353 aa29.82■■■□□ 2.36
THRA-202ENST00000394121 PRR36Q9H6K5 1346 aa29.82■■■□□ 2.36
THRA-202ENST00000394121 PRKCSHP14314 528 aaPredicted RBP29.81■■■□□ 2.36
THRA-202ENST00000394121 PMFBP1Q8TBY8 1022 aa29.81■■■□□ 2.36
THRA-202ENST00000394121 NUDT16Q96DE0 195 aaKnown RBP29.8■■■□□ 2.36
THRA-202ENST00000394121 A0A1W2PP64 1363 aa29.8■■■□□ 2.36
THRA-202ENST00000394121 USP19O94966 1318 aa29.78■■■□□ 2.36
THRA-202ENST00000394121 GSE1Q14687 1217 aa29.78■■■□□ 2.36
THRA-202ENST00000394121 CD163L1Q9NR16 1453 aa29.77■■■□□ 2.36
THRA-202ENST00000394121 CHD2O14647 1828 aaKnown RBP29.76■■■□□ 2.36
THRA-202ENST00000394121 MYH16Q9H6N6 1097 aa29.76■■■□□ 2.35
THRA-202ENST00000394121 ADGRB2O60241 1585 aa29.74■■■□□ 2.35
THRA-202ENST00000394121 RLBP1P12271 317 aa29.74■■■□□ 2.35
THRA-202ENST00000394121 PPIP5K1Q6PFW1 1433 aa29.73■■■□□ 2.35
THRA-202ENST00000394121 PCDHB15Q9Y5E8 787 aa29.73■■■□□ 2.35
THRA-202ENST00000394121 CCDC61Q9Y6R9 512 aa29.72■■■□□ 2.35
THRA-202ENST00000394121 ATP7BP35670 1465 aa29.72■■■□□ 2.35
THRA-202ENST00000394121 U2AF1L5P0DN76 240 aaPredicted RBP29.71■■■□□ 2.35
THRA-202ENST00000394121 U2AF1Q01081 240 aaKnown RBP eCLIP29.71■■■□□ 2.35
THRA-202ENST00000394121 TERF2IPQ9NYB0 399 aa29.7■■■□□ 2.35
THRA-202ENST00000394121 TNNQ9UQP3 1299 aa29.7■■■□□ 2.35
THRA-202ENST00000394121 SEC24BO95487 1268 aa29.69■■■□□ 2.34
THRA-202ENST00000394121 BCL2L13Q9BXK5 485 aa29.69■■■□□ 2.34
THRA-202ENST00000394121 CT47B1P0C2W7 299 aaPredicted RBP29.66■■■□□ 2.34
THRA-202ENST00000394121 HDGFL2Q7Z4V5 671 aaPredicted RBP29.66■■■□□ 2.34
THRA-202ENST00000394121 RWDD1Q9H446 243 aaPredicted RBP29.66■■■□□ 2.34
THRA-202ENST00000394121 IL27Q8NEV9 243 aa29.66■■■□□ 2.34
THRA-202ENST00000394121 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.65■■■□□ 2.34
THRA-202ENST00000394121 PROSER2Q86WR7 435 aaPredicted RBP29.65■■■□□ 2.34
THRA-202ENST00000394121 STRCQ7RTU9 1775 aa29.65■■■□□ 2.34
THRA-202ENST00000394121 C14orf37Q86TY3 774 aa29.64■■■□□ 2.34
THRA-202ENST00000394121 GGNBP2Q9H3C7 697 aa29.64■■■□□ 2.34
THRA-202ENST00000394121 PDZRN3Q9UPQ7 1066 aa29.64■■■□□ 2.34
THRA-202ENST00000394121 FRAT2O75474 233 aaPredicted RBP29.64■■■□□ 2.33
THRA-202ENST00000394121 MVPQ14764 893 aaKnown RBP29.64■■■□□ 2.33
THRA-202ENST00000394121 BECN1Q14457 450 aa29.63■■■□□ 2.33
THRA-202ENST00000394121 ZKSCAN2Q63HK3 967 aa29.62■■■□□ 2.33
THRA-202ENST00000394121 CPSF1Q10570 1443 aaKnown RBP29.61■■■□□ 2.33
THRA-202ENST00000394121 FYB1O15117 783 aa29.6■■■□□ 2.33
THRA-202ENST00000394121 NALCNQ8IZF0 1738 aa29.6■■■□□ 2.33
THRA-202ENST00000394121 PLEKHF1Q96S99 279 aa29.6■■■□□ 2.33
THRA-202ENST00000394121 NWD1Q149M9 1564 aa29.59■■■□□ 2.33
THRA-202ENST00000394121 DZIP1LQ8IYY4 767 aaKnown RBP29.59■■■□□ 2.33
THRA-202ENST00000394121 ACEP12821 1306 aa29.59■■■□□ 2.33
THRA-202ENST00000394121 COL3A1P02461 1466 aaPredicted RBP29.58■■■□□ 2.33
THRA-202ENST00000394121 UPF2Q9HAU5 1272 aaKnown RBP29.58■■■□□ 2.33
THRA-202ENST00000394121 ANKRD26Q9UPS8 1709 aa29.57■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms