RNA–Protein interactions for RNA: ENST00000394083.6

GAPVD1-204, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 5 BASIC

Gene GAPVD1, Length 4,747 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-204ENST00000394083 MTHFSP49914 203 aa11.45□□□□□ -0.58
GAPVD1-204ENST00000394083 TNNT2P45379 298 aaPredicted RBP11.45□□□□□ -0.58
GAPVD1-204ENST00000394083 GGNBP2Q9H3C7 697 aa11.44□□□□□ -0.58
GAPVD1-204ENST00000394083 SIPA1L3O60292 1781 aaPredicted RBP11.44□□□□□ -0.58
GAPVD1-204ENST00000394083 PHRF1Q9P1Y6 1649 aaKnown RBP11.44□□□□□ -0.58
GAPVD1-204ENST00000394083 CABP1Q9NZU7 370 aa11.44□□□□□ -0.58
GAPVD1-204ENST00000394083 FAM135BQ49AJ0 1406 aa11.44□□□□□ -0.58
GAPVD1-204ENST00000394083 CDK19Q9BWU1 502 aa11.44□□□□□ -0.58
GAPVD1-204ENST00000394083 WWC1Q8IX03 1113 aa11.43□□□□□ -0.58
GAPVD1-204ENST00000394083 TNRQ92752 1358 aa11.43□□□□□ -0.58
GAPVD1-204ENST00000394083 VGFO15240 615 aaPredicted RBP11.43□□□□□ -0.58
GAPVD1-204ENST00000394083 TXNDC2Q86VQ3 553 aa11.43□□□□□ -0.58
GAPVD1-204ENST00000394083 N4BP2Q86UW6 1770 aaPredicted RBP11.42□□□□□ -0.58
GAPVD1-204ENST00000394083 PHACTR3Q96KR7 559 aa11.42□□□□□ -0.58
GAPVD1-204ENST00000394083 PPIP5K1Q6PFW1 1433 aa11.42□□□□□ -0.58
GAPVD1-204ENST00000394083 RRP7AQ9Y3A4 280 aaKnown RBP11.42□□□□□ -0.58
GAPVD1-204ENST00000394083 COL18A1P39060 1754 aa11.41□□□□□ -0.58
GAPVD1-204ENST00000394083 POLKQ9UBT6 870 aa11.41□□□□□ -0.58
GAPVD1-204ENST00000394083 ALS2Q96Q42 1657 aa11.41□□□□□ -0.58
GAPVD1-204ENST00000394083 PLEKHG1Q9ULL1 1385 aa11.41□□□□□ -0.58
GAPVD1-204ENST00000394083 NFAT5O94916 1531 aa11.41□□□□□ -0.58
GAPVD1-204ENST00000394083 CAMTA1Q9Y6Y1 1673 aa11.41□□□□□ -0.58
GAPVD1-204ENST00000394083 GLI3P10071 1580 aa11.4□□□□□ -0.58
GAPVD1-204ENST00000394083 PUS7Q96PZ0 661 aaKnown RBP11.4□□□□□ -0.58
GAPVD1-204ENST00000394083 NME9Q86XW9 330 aa11.4□□□□□ -0.59
GAPVD1-204ENST00000394083 KNSTRNQ9Y448 316 aa11.39□□□□□ -0.59
GAPVD1-204ENST00000394083 LMO7Q8WWI1 1683 aa11.39□□□□□ -0.59
GAPVD1-204ENST00000394083 RBM33Q96EV2 1170 aaKnown RBP11.39□□□□□ -0.59
GAPVD1-204ENST00000394083 FAM208AQ9UK61 1670 aaKnown RBP11.39□□□□□ -0.59
GAPVD1-204ENST00000394083 SHANK3Q9BYB0 1731 aa11.38□□□□□ -0.59
GAPVD1-204ENST00000394083 RCAN3Q9UKA8 241 aa11.38□□□□□ -0.59
GAPVD1-204ENST00000394083 CRBNQ96SW2 442 aa11.38□□□□□ -0.59
GAPVD1-204ENST00000394083 EMILIN1Q9Y6C2 1016 aa11.38□□□□□ -0.59
GAPVD1-204ENST00000394083 RGS12O14924 1447 aa11.37□□□□□ -0.59
GAPVD1-204ENST00000394083 PTCH1Q13635 1447 aa11.37□□□□□ -0.59
GAPVD1-204ENST00000394083 IGHDP01880 384 aa11.37□□□□□ -0.59
GAPVD1-204ENST00000394083 SLC26A8Q96RN1 970 aa11.37□□□□□ -0.59
GAPVD1-204ENST00000394083 ADAMTS7Q9UKP4 1686 aa11.36□□□□□ -0.59
GAPVD1-204ENST00000394083 CDK12Q9NYV4 1490 aaPredicted RBP11.36□□□□□ -0.59
GAPVD1-204ENST00000394083 PPP4R2Q9NY27 417 aa11.36□□□□□ -0.59
GAPVD1-204ENST00000394083 PPP6R1Q9UPN7 881 aa11.36□□□□□ -0.59
GAPVD1-204ENST00000394083 USP6P35125 1406 aa11.35□□□□□ -0.59
GAPVD1-204ENST00000394083 RSPH6AQ9H0K4 717 aa11.35□□□□□ -0.59
GAPVD1-204ENST00000394083 WASLO00401 505 aaPredicted RBP11.35□□□□□ -0.59
GAPVD1-204ENST00000394083 TCP11L2Q8N4U5 519 aa11.35□□□□□ -0.59
GAPVD1-204ENST00000394083 KDM3BQ7LBC6 1761 aa11.34□□□□□ -0.59
GAPVD1-204ENST00000394083 EVC2Q86UK5 1308 aa11.34□□□□□ -0.59
GAPVD1-204ENST00000394083 MED1Q15648 1581 aaPredicted RBP11.34□□□□□ -0.59
GAPVD1-204ENST00000394083 IL13P35225 146 aa11.34□□□□□ -0.59
GAPVD1-204ENST00000394083 EDC4Q6P2E9 1401 aaKnown RBP11.34□□□□□ -0.59
GAPVD1-204ENST00000394083 USP19O94966 1318 aa11.34□□□□□ -0.59
GAPVD1-204ENST00000394083 ABCA3Q99758 1704 aa11.33□□□□□ -0.6
GAPVD1-204ENST00000394083 PAK3O75914 559 aaPredicted RBP11.33□□□□□ -0.6
GAPVD1-204ENST00000394083 USP31Q70CQ4 1352 aa11.33□□□□□ -0.6
GAPVD1-204ENST00000394083 TSR2Q969E8 191 aaKnown RBP11.33□□□□□ -0.6
GAPVD1-204ENST00000394083 THUMPD2Q9BTF0 503 aaKnown RBP11.32□□□□□ -0.6
GAPVD1-204ENST00000394083 AEBP1Q8IUX7 1158 aa11.32□□□□□ -0.6
GAPVD1-204ENST00000394083 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.31□□□□□ -0.6
GAPVD1-204ENST00000394083 PIK3R4Q99570 1358 aa11.31□□□□□ -0.6
GAPVD1-204ENST00000394083 RRS1Q15050 365 aaKnown RBP11.31□□□□□ -0.6
GAPVD1-204ENST00000394083 NSD2O96028 1365 aa11.31□□□□□ -0.6
GAPVD1-204ENST00000394083 C5P01031 1676 aa11.31□□□□□ -0.6
GAPVD1-204ENST00000394083 KCNA6P17658 529 aa11.3□□□□□ -0.6
GAPVD1-204ENST00000394083 PCDHB15Q9Y5E8 787 aa11.3□□□□□ -0.6
GAPVD1-204ENST00000394083 ATAD2Q6PL18 1390 aa11.3□□□□□ -0.6
GAPVD1-204ENST00000394083 TSPYL6Q8N831 410 aa11.3□□□□□ -0.6
GAPVD1-204ENST00000394083 NUDT16Q96DE0 195 aaKnown RBP11.3□□□□□ -0.6
GAPVD1-204ENST00000394083 FAM83GA6ND36 823 aa11.29□□□□□ -0.6
GAPVD1-204ENST00000394083 NINLQ9Y2I6 1382 aa11.29□□□□□ -0.6
GAPVD1-204ENST00000394083 RARSP54136 660 aaKnown RBP11.29□□□□□ -0.6
GAPVD1-204ENST00000394083 CGNL1Q0VF96 1302 aa11.28□□□□□ -0.6
GAPVD1-204ENST00000394083 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.28□□□□□ -0.6
GAPVD1-204ENST00000394083 NUTM2FA1L443 756 aa11.28□□□□□ -0.6
GAPVD1-204ENST00000394083 AATKQ6ZMQ8 1374 aa11.28□□□□□ -0.6
GAPVD1-204ENST00000394083 KRT24Q2M2I5 525 aa11.28□□□□□ -0.6
GAPVD1-204ENST00000394083 FANCIQ9NVI1 1328 aa11.27□□□□□ -0.6
GAPVD1-204ENST00000394083 SEC24BO95487 1268 aa11.27□□□□□ -0.6
GAPVD1-204ENST00000394083 SIRT1Q96EB6 747 aa11.27□□□□□ -0.6
GAPVD1-204ENST00000394083 ACEP12821 1306 aa11.27□□□□□ -0.61
GAPVD1-204ENST00000394083 PDE3BQ13370 1112 aa11.27□□□□□ -0.61
GAPVD1-204ENST00000394083 CCDC27Q2M243 656 aa11.27□□□□□ -0.61
GAPVD1-204ENST00000394083 PANK1Q8TE04 598 aa11.27□□□□□ -0.61
GAPVD1-204ENST00000394083 BCL2L13Q9BXK5 485 aa11.27□□□□□ -0.61
GAPVD1-204ENST00000394083 ZNF853P0CG23 659 aa11.27□□□□□ -0.61
GAPVD1-204ENST00000394083 SRPK2P78362 688 aaKnown RBP11.27□□□□□ -0.61
GAPVD1-204ENST00000394083 CRB1P82279 1406 aa11.27□□□□□ -0.61
GAPVD1-204ENST00000394083 TMPOP42166 694 aaKnown RBP11.26□□□□□ -0.61
GAPVD1-204ENST00000394083 MORC1Q86VD1 984 aa11.26□□□□□ -0.61
GAPVD1-204ENST00000394083 C8orf34Q49A92 452 aa11.26□□□□□ -0.61
GAPVD1-204ENST00000394083 ERICH6BQ5W0A0 696 aa11.26□□□□□ -0.61
GAPVD1-204ENST00000394083 GOLGA2Q08379 1002 aa11.25□□□□□ -0.61
GAPVD1-204ENST00000394083 NCAPD2Q15021 1401 aa11.25□□□□□ -0.61
GAPVD1-204ENST00000394083 PLEKHG3A1L390 1219 aa11.25□□□□□ -0.61
GAPVD1-204ENST00000394083 PXDNQ92626 1479 aa11.25□□□□□ -0.61
GAPVD1-204ENST00000394083 HSP90AB2PQ58FF8 381 aa11.24□□□□□ -0.61
GAPVD1-204ENST00000394083 AMOTL2Q9Y2J4 779 aa11.24□□□□□ -0.61
GAPVD1-204ENST00000394083 SLIT3O75094 1523 aa11.24□□□□□ -0.61
GAPVD1-204ENST00000394083 NEUROD2Q15784 382 aa11.24□□□□□ -0.61
GAPVD1-204ENST00000394083 FOXO3O43524 673 aa11.24□□□□□ -0.61
GAPVD1-204ENST00000394083 DCTN1Q14203 1278 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms