RNA–Protein interactions for RNA: ENST00000393952.3

LRFN4-202, Transcript of leucine rich repeat and fibronectin type III domain containing 4, humanhuman

TSL 5 BASIC

Gene LRFN4, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4-202ENST00000393952 SLAIN2Q9P270 581 aa33■■■□□ 2.87
LRFN4-202ENST00000393952 FOXO3O43524 673 aa32.98■■■□□ 2.87
LRFN4-202ENST00000393952 NME9Q86XW9 330 aa32.98■■■□□ 2.87
LRFN4-202ENST00000393952 CCER2I3L3R5 266 aa32.97■■■□□ 2.87
LRFN4-202ENST00000393952 MYBBP1AQ9BQG0 1328 aaKnown RBP32.97■■■□□ 2.87
LRFN4-202ENST00000393952 MORC1Q86VD1 984 aa32.96■■■□□ 2.87
LRFN4-202ENST00000393952 PSME1Q06323 249 aa32.96■■■□□ 2.87
LRFN4-202ENST00000393952 BRINP3Q76B58 766 aa32.94■■■□□ 2.86
LRFN4-202ENST00000393952 TTC21AQ8NDW8 1320 aa32.94■■■□□ 2.86
LRFN4-202ENST00000393952 ZRANB1Q9UGI0 708 aa32.93■■■□□ 2.86
LRFN4-202ENST00000393952 BRD4O60885 1362 aaPredicted RBP32.92■■■□□ 2.86
LRFN4-202ENST00000393952 XPCQ01831 940 aaPredicted RBP32.92■■■□□ 2.86
LRFN4-202ENST00000393952 PIK3C2AO00443 1686 aa32.9■■■□□ 2.86
LRFN4-202ENST00000393952 CCDC184Q52MB2 194 aa32.9■■■□□ 2.86
LRFN4-202ENST00000393952 PPP2R1AP30153 589 aa32.89■■■□□ 2.86
LRFN4-202ENST00000393952 DDX17Q92841 729 aaKnown RBP32.89■■■□□ 2.86
LRFN4-202ENST00000393952 TRPM3Q9HCF6 1732 aaPredicted RBP32.89■■■□□ 2.86
LRFN4-202ENST00000393952 PAK3O75914 559 aaPredicted RBP32.88■■■□□ 2.85
LRFN4-202ENST00000393952 TNNT2P45379 298 aaPredicted RBP32.88■■■□□ 2.85
LRFN4-202ENST00000393952 KRT28Q7Z3Y7 464 aa32.88■■■□□ 2.85
LRFN4-202ENST00000393952 NLRP13Q86W25 1043 aa32.86■■■□□ 2.85
LRFN4-202ENST00000393952 NPHP3Q7Z494 1330 aa32.86■■■□□ 2.85
LRFN4-202ENST00000393952 COG3Q96JB2 828 aa32.85■■■□□ 2.85
LRFN4-202ENST00000393952 OVOS2A0A0J9YW53 1432 aa32.85■■■□□ 2.85
LRFN4-202ENST00000393952 OVOS2Q6IE36 1432 aa32.85■■■□□ 2.85
LRFN4-202ENST00000393952 MRS2Q9HD23 443 aa32.83■■■□□ 2.85
LRFN4-202ENST00000393952 PXDNQ92626 1479 aa32.83■■■□□ 2.85
LRFN4-202ENST00000393952 USP31Q70CQ4 1352 aa32.82■■■□□ 2.84
LRFN4-202ENST00000393952 ABTB2Q8N961 1025 aa32.81■■■□□ 2.84
LRFN4-202ENST00000393952 MARF1Q9Y4F3 1742 aaKnown RBP32.81■■■□□ 2.84
LRFN4-202ENST00000393952 IQSEC2Q5JU85 1478 aa32.8■■■□□ 2.84
LRFN4-202ENST00000393952 USP54Q70EL1 1684 aa32.8■■■□□ 2.84
LRFN4-202ENST00000393952 ROBO1Q9Y6N7 1651 aa32.8■■■□□ 2.84
LRFN4-202ENST00000393952 NHSL1Q5SYE7 1610 aa32.79■■■□□ 2.84
LRFN4-202ENST00000393952 NLRP6P59044 892 aa32.79■■■□□ 2.84
LRFN4-202ENST00000393952 NUTM2GQ5VZR2 741 aa32.79■■■□□ 2.84
LRFN4-202ENST00000393952 ALS2Q96Q42 1657 aa32.77■■■□□ 2.84
LRFN4-202ENST00000393952 SBNO1A3KN83 1393 aa32.77■■■□□ 2.84
LRFN4-202ENST00000393952 SCAF1Q9H7N4 1312 aaKnown RBP32.76■■■□□ 2.84
LRFN4-202ENST00000393952 CERKQ8TCT0 537 aa32.76■■■□□ 2.84
LRFN4-202ENST00000393952 TOM1O60784 492 aa32.75■■■□□ 2.83
LRFN4-202ENST00000393952 FBLN1P23142 703 aa32.75■■■□□ 2.83
LRFN4-202ENST00000393952 MAP2P11137 1827 aaKnown RBP32.72■■■□□ 2.83
LRFN4-202ENST00000393952 LMOD2Q6P5Q4 547 aa32.72■■■□□ 2.83
LRFN4-202ENST00000393952 TNS3Q68CZ2 1445 aa32.72■■■□□ 2.83
LRFN4-202ENST00000393952 SOS2Q07890 1332 aaPredicted RBP32.72■■■□□ 2.83
LRFN4-202ENST00000393952 AATKQ6ZMQ8 1374 aa32.71■■■□□ 2.83
LRFN4-202ENST00000393952 UBAP1LF5GYI3 381 aa32.7■■■□□ 2.83
LRFN4-202ENST00000393952 MTHFSP49914 203 aa32.7■■■□□ 2.83
LRFN4-202ENST00000393952 SPATA31A3Q5VYP0 1347 aa32.69■■■□□ 2.82
LRFN4-202ENST00000393952 SOX12O15370 315 aa32.68■■■□□ 2.82
LRFN4-202ENST00000393952 AHDC1Q5TGY3 1603 aaPredicted RBP32.67■■■□□ 2.82
LRFN4-202ENST00000393952 POLKQ9UBT6 870 aa32.66■■■□□ 2.82
LRFN4-202ENST00000393952 PIP4K2BP78356 416 aa32.66■■■□□ 2.82
LRFN4-202ENST00000393952 RRS1Q15050 365 aaKnown RBP32.64■■■□□ 2.82
LRFN4-202ENST00000393952 PNISRQ8TF01 805 aaKnown RBP32.63■■■□□ 2.81
LRFN4-202ENST00000393952 EMILIN1Q9Y6C2 1016 aa32.63■■■□□ 2.81
LRFN4-202ENST00000393952 SMG6Q86US8 1419 aaKnown RBP32.63■■■□□ 2.81
LRFN4-202ENST00000393952 USP19O94966 1318 aa32.62■■■□□ 2.81
LRFN4-202ENST00000393952 SLIT3O75094 1523 aa32.62■■■□□ 2.81
LRFN4-202ENST00000393952 ARHGEF10O15013 1369 aa32.62■■■□□ 2.81
LRFN4-202ENST00000393952 PLEKHG5O94827 1062 aa32.62■■■□□ 2.81
LRFN4-202ENST00000393952 FAM9BQ8IZU0 186 aa32.61■■■□□ 2.81
LRFN4-202ENST00000393952 MED1Q15648 1581 aaPredicted RBP32.6■■■□□ 2.81
LRFN4-202ENST00000393952 NFAT5O94916 1531 aa32.6■■■□□ 2.81
LRFN4-202ENST00000393952 PPM1GO15355 546 aaPredicted RBP32.59■■■□□ 2.81
LRFN4-202ENST00000393952 CFAP53Q96M91 514 aa32.59■■■□□ 2.81
LRFN4-202ENST00000393952 PEAK1Q9H792 1746 aa32.57■■■□□ 2.81
LRFN4-202ENST00000393952 PHLPP1O60346 1717 aa32.57■■■□□ 2.8
LRFN4-202ENST00000393952 COL3A1P02461 1466 aaPredicted RBP32.57■■■□□ 2.8
LRFN4-202ENST00000393952 CDK12Q9NYV4 1490 aaPredicted RBP32.57■■■□□ 2.8
LRFN4-202ENST00000393952 CRYBG1Q9Y4K1 1723 aa32.56■■■□□ 2.8
LRFN4-202ENST00000393952 MAP3K19Q56UN5 1328 aa32.56■■■□□ 2.8
LRFN4-202ENST00000393952 KCNH5Q8NCM2 988 aa32.56■■■□□ 2.8
LRFN4-202ENST00000393952 PNPLA6Q8IY17 1366 aa32.56■■■□□ 2.8
LRFN4-202ENST00000393952 PHRF1Q9P1Y6 1649 aaKnown RBP32.55■■■□□ 2.8
LRFN4-202ENST00000393952 SHPRHQ149N8 1683 aa32.55■■■□□ 2.8
LRFN4-202ENST00000393952 GCP02774 474 aa32.54■■■□□ 2.8
LRFN4-202ENST00000393952 LTN1O94822 1766 aa32.53■■■□□ 2.8
LRFN4-202ENST00000393952 INSRP06213 1382 aa32.53■■■□□ 2.8
LRFN4-202ENST00000393952 COL16A1Q07092 1604 aaPredicted RBP32.52■■■□□ 2.8
LRFN4-202ENST00000393952 CABLES1Q8TDN4 633 aa32.52■■■□□ 2.8
LRFN4-202ENST00000393952 YTHDC1Q96MU7 727 aaKnown RBP32.52■■■□□ 2.8
LRFN4-202ENST00000393952 LRRC59Q96AG4 307 aaKnown RBP32.5■■■□□ 2.79
LRFN4-202ENST00000393952 WDR43Q15061 677 aaKnown RBP eCLIP32.49■■■□□ 2.79
LRFN4-202ENST00000393952 ABCA3Q99758 1704 aa32.47■■■□□ 2.79
LRFN4-202ENST00000393952 AMPHP49418 695 aa32.47■■■□□ 2.79
LRFN4-202ENST00000393952 FLT4P35916 1363 aa32.47■■■□□ 2.79
LRFN4-202ENST00000393952 DIAPH1O60610 1272 aaKnown RBP32.45■■■□□ 2.79
LRFN4-202ENST00000393952 HSP90AB2PQ58FF8 381 aa32.45■■■□□ 2.78
LRFN4-202ENST00000393952 ADAMTS8Q9UP79 889 aa32.45■■■□□ 2.78
LRFN4-202ENST00000393952 KIF24Q5T7B8 1368 aa32.44■■■□□ 2.78
LRFN4-202ENST00000393952 ZBTB7CA1YPR0 619 aa32.44■■■□□ 2.78
LRFN4-202ENST00000393952 ARHGEF25Q86VW2 580 aa32.44■■■□□ 2.78
LRFN4-202ENST00000393952 RTL1A6NKG5 1358 aa32.43■■■□□ 2.78
LRFN4-202ENST00000393952 HOXC9P31274 260 aa32.42■■■□□ 2.78
LRFN4-202ENST00000393952 ZC3H6P61129 1189 aaKnown RBP32.42■■■□□ 2.78
LRFN4-202ENST00000393952 COL22A1Q8NFW1 1626 aaPredicted RBP32.41■■■□□ 2.78
LRFN4-202ENST00000393952 NUDCQ9Y266 331 aa32.41■■■□□ 2.78
LRFN4-202ENST00000393952 IL13P35225 146 aa32.4■■■□□ 2.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms