RNA–Protein interactions for RNA: ENST00000393693.6

SNCB-202, Transcript of synuclein beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCB, Length 1,234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCB-202ENST00000393693 NGDNQ8NEJ9 315 aaKnown RBP27.17■■□□□ 1.94
SNCB-202ENST00000393693 EIF3AQ14152 1382 aaKnown RBP27.17■■□□□ 1.94
SNCB-202ENST00000393693 ALS2Q96Q42 1657 aa27.15■■□□□ 1.94
SNCB-202ENST00000393693 PAK3O75914 559 aaPredicted RBP27.15■■□□□ 1.94
SNCB-202ENST00000393693 NRAPQ86VF7 1730 aa27.13■■□□□ 1.93
SNCB-202ENST00000393693 STAC3Q96MF2 364 aa27.13■■□□□ 1.93
SNCB-202ENST00000393693 NUDT16Q96DE0 195 aaKnown RBP27.11■■□□□ 1.93
SNCB-202ENST00000393693 COL14A1Q05707 1796 aaKnown RBP27.09■■□□□ 1.93
SNCB-202ENST00000393693 HRCP23327 699 aa27.09■■□□□ 1.93
SNCB-202ENST00000393693 FAM182BQ5T319 152 aa27.08■■□□□ 1.93
SNCB-202ENST00000393693 ATP7BP35670 1465 aa27.07■■□□□ 1.92
SNCB-202ENST00000393693 PRDM11Q9NQV5 511 aa27.07■■□□□ 1.92
SNCB-202ENST00000393693 SPATA31A5Q5VU36 1347 aa27.07■■□□□ 1.92
SNCB-202ENST00000393693 SPATA31A7Q8IWB4 1347 aa27.07■■□□□ 1.92
SNCB-202ENST00000393693 ARHGEF28Q8N1W1 1705 aaKnown RBP27.07■■□□□ 1.92
SNCB-202ENST00000393693 CDK19Q9BWU1 502 aa27.06■■□□□ 1.92
SNCB-202ENST00000393693 CRYBG1Q9Y4K1 1723 aa27.05■■□□□ 1.92
SNCB-202ENST00000393693 NUTM2GQ5VZR2 741 aa27.05■■□□□ 1.92
SNCB-202ENST00000393693 CHRNA2Q15822 529 aa27.04■■□□□ 1.92
SNCB-202ENST00000393693 BAG6P46379 1132 aa27.03■■□□□ 1.92
SNCB-202ENST00000393693 KIAA0232Q92628 1395 aa27.02■■□□□ 1.92
SNCB-202ENST00000393693 ZC3H6P61129 1189 aaKnown RBP27.01■■□□□ 1.91
SNCB-202ENST00000393693 PSDA5PKW4 1024 aaPredicted RBP27■■□□□ 1.91
SNCB-202ENST00000393693 ACEP12821 1306 aa26.99■■□□□ 1.91
SNCB-202ENST00000393693 EN1Q05925 392 aaPredicted RBP26.99■■□□□ 1.91
SNCB-202ENST00000393693 NBPF1Q3BBV0 1214 aa26.99■■□□□ 1.91
SNCB-202ENST00000393693 STRN4Q9NRL3 753 aa26.99■■□□□ 1.91
SNCB-202ENST00000393693 NBPF8Q3BBV2 869 aa26.98■■□□□ 1.91
SNCB-202ENST00000393693 ITSN1Q15811 1721 aa26.98■■□□□ 1.91
SNCB-202ENST00000393693 SPATA31A1Q5TZJ5 1347 aa26.97■■□□□ 1.91
SNCB-202ENST00000393693 POLR3AO14802 1390 aaPredicted RBP26.97■■□□□ 1.91
SNCB-202ENST00000393693 THSD7AQ9UPZ6 1657 aa26.96■■□□□ 1.91
SNCB-202ENST00000393693 CCDC61Q9Y6R9 512 aa26.96■■□□□ 1.91
SNCB-202ENST00000393693 PHRF1Q9P1Y6 1649 aaKnown RBP26.94■■□□□ 1.9
SNCB-202ENST00000393693 PLEKHG3A1L390 1219 aa26.94■■□□□ 1.9
SNCB-202ENST00000393693 USP35Q9P2H5 1018 aa26.93■■□□□ 1.9
SNCB-202ENST00000393693 TOPAZ1Q8N9V7 1692 aa26.92■■□□□ 1.9
SNCB-202ENST00000393693 ABTB2Q8N961 1025 aa26.91■■□□□ 1.9
SNCB-202ENST00000393693 EVA1CP58658 441 aa26.89■■□□□ 1.9
SNCB-202ENST00000393693 RGPD1P0DJD0 1748 aa26.89■■□□□ 1.9
SNCB-202ENST00000393693 KIAA1210Q9ULL0 1709 aa26.88■■□□□ 1.89
SNCB-202ENST00000393693 TRIM37O94972 964 aa26.88■■□□□ 1.89
SNCB-202ENST00000393693 EZH2Q15910 746 aaKnown RBP26.88■■□□□ 1.89
SNCB-202ENST00000393693 CABP2Q9NPB3 220 aa26.88■■□□□ 1.89
SNCB-202ENST00000393693 SRPK2P78362 688 aaKnown RBP26.87■■□□□ 1.89
SNCB-202ENST00000393693 R3HDM1Q15032 1099 aaKnown RBP26.86■■□□□ 1.89
SNCB-202ENST00000393693 LARP1Q6PKG0 1096 aaKnown RBP26.86■■□□□ 1.89
SNCB-202ENST00000393693 SSH2Q76I76 1423 aa26.86■■□□□ 1.89
SNCB-202ENST00000393693 LRP5O75197 1615 aa26.86■■□□□ 1.89
SNCB-202ENST00000393693 NRKQ7Z2Y5 1582 aa26.85■■□□□ 1.89
SNCB-202ENST00000393693 FAM196AQ6ZSG2 479 aa26.85■■□□□ 1.89
SNCB-202ENST00000393693 CAMTA1Q9Y6Y1 1673 aa26.85■■□□□ 1.89
SNCB-202ENST00000393693 CENPJQ9HC77 1338 aaPredicted RBP26.85■■□□□ 1.89
SNCB-202ENST00000393693 DISP2A7MBM2 1401 aa26.84■■□□□ 1.89
SNCB-202ENST00000393693 PPIP5K1Q6PFW1 1433 aa26.84■■□□□ 1.89
SNCB-202ENST00000393693 TNS1Q9HBL0 1735 aaKnown RBP26.84■■□□□ 1.89
SNCB-202ENST00000393693 USP19O94966 1318 aa26.84■■□□□ 1.89
SNCB-202ENST00000393693 BARGINQ6ZT62 677 aa26.83■■□□□ 1.89
SNCB-202ENST00000393693 CAMKK2Q96RR4 588 aa26.82■■□□□ 1.88
SNCB-202ENST00000393693 GCP02774 474 aa26.81■■□□□ 1.88
SNCB-202ENST00000393693 NLRP13Q86W25 1043 aa26.81■■□□□ 1.88
SNCB-202ENST00000393693 CPDO75976 1380 aa26.81■■□□□ 1.88
SNCB-202ENST00000393693 APBA3O96018 575 aa26.8■■□□□ 1.88
SNCB-202ENST00000393693 PDE3BQ13370 1112 aa26.8■■□□□ 1.88
SNCB-202ENST00000393693 TCP11L2Q8N4U5 519 aa26.79■■□□□ 1.88
SNCB-202ENST00000393693 CABP1Q9NZU7 370 aa26.79■■□□□ 1.88
SNCB-202ENST00000393693 LMO7Q8WWI1 1683 aa26.78■■□□□ 1.88
SNCB-202ENST00000393693 ZBTB7CA1YPR0 619 aa26.77■■□□□ 1.88
SNCB-202ENST00000393693 L3MBTL2Q969R5 705 aa26.75■■□□□ 1.87
SNCB-202ENST00000393693 NLRP6P59044 892 aa26.73■■□□□ 1.87
SNCB-202ENST00000393693 QRICH2Q9H0J4 1663 aa26.73■■□□□ 1.87
SNCB-202ENST00000393693 COL5A2P05997 1499 aaPredicted RBP26.72■■□□□ 1.87
SNCB-202ENST00000393693 USP6P35125 1406 aa26.72■■□□□ 1.87
SNCB-202ENST00000393693 SIN3AQ96ST3 1273 aa26.71■■□□□ 1.87
SNCB-202ENST00000393693 THRAP3Q9Y2W1 955 aaKnown RBP26.71■■□□□ 1.87
SNCB-202ENST00000393693 BRD4O60885 1362 aaPredicted RBP26.7■■□□□ 1.86
SNCB-202ENST00000393693 PARD3Q8TEW0 1356 aa26.69■■□□□ 1.86
SNCB-202ENST00000393693 CRB1P82279 1406 aa26.67■■□□□ 1.86
SNCB-202ENST00000393693 EVC2Q86UK5 1308 aa26.65■■□□□ 1.86
SNCB-202ENST00000393693 SLIT3O75094 1523 aa26.65■■□□□ 1.86
SNCB-202ENST00000393693 AATKQ6ZMQ8 1374 aa26.65■■□□□ 1.86
SNCB-202ENST00000393693 AXIN2Q9Y2T1 843 aa26.64■■□□□ 1.86
SNCB-202ENST00000393693 NEUROD1Q13562 356 aa26.63■■□□□ 1.85
SNCB-202ENST00000393693 RREB1Q92766 1687 aa26.63■■□□□ 1.85
SNCB-202ENST00000393693 PARP4Q9UKK3 1724 aaKnown RBP26.62■■□□□ 1.85
SNCB-202ENST00000393693 TOM1L2Q6ZVM7 507 aa26.62■■□□□ 1.85
SNCB-202ENST00000393693 PIK3C2AO00443 1686 aa26.61■■□□□ 1.85
SNCB-202ENST00000393693 NBPF14Q5TI25 921 aa26.61■■□□□ 1.85
SNCB-202ENST00000393693 CCER1Q8TC90 406 aaPredicted RBP26.61■■□□□ 1.85
SNCB-202ENST00000393693 NUP188Q5SRE5 1749 aa26.61■■□□□ 1.85
SNCB-202ENST00000393693 TTC21BQ7Z4L5 1316 aa26.61■■□□□ 1.85
SNCB-202ENST00000393693 SOX12O15370 315 aa26.6■■□□□ 1.85
SNCB-202ENST00000393693 TRPM1Q7Z4N2 1603 aa26.6■■□□□ 1.85
SNCB-202ENST00000393693 DDB1Q16531 1140 aa26.59■■□□□ 1.85
SNCB-202ENST00000393693 ROCK2O75116 1388 aaKnown RBP26.58■■□□□ 1.85
SNCB-202ENST00000393693 ZEB1P37275 1124 aaPredicted RBP26.58■■□□□ 1.85
SNCB-202ENST00000393693 COL18A1P39060 1754 aa26.58■■□□□ 1.85
SNCB-202ENST00000393693 OVOS2A0A0G2JMS6 1433 aa26.57■■□□□ 1.84
SNCB-202ENST00000393693 OVOS2A0A0J9YW53 1432 aa26.57■■□□□ 1.84
SNCB-202ENST00000393693 OVOS2Q6IE36 1432 aa26.57■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms