RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 TERF2IPQ9NYB0 399 aa18.43■□□□□ 0.54
USP44-202ENST00000393091 CABP1Q9NZU7 370 aa18.43■□□□□ 0.54
USP44-202ENST00000393091 FBXO41Q8TF61 875 aa18.42■□□□□ 0.54
USP44-202ENST00000393091 OVOS2A0A0J9YW53 1432 aa18.41■□□□□ 0.54
USP44-202ENST00000393091 OVOS2Q6IE36 1432 aa18.41■□□□□ 0.54
USP44-202ENST00000393091 UBAP1LF5GYI3 381 aa18.4■□□□□ 0.54
USP44-202ENST00000393091 PER1O15534 1290 aaPredicted RBP18.4■□□□□ 0.54
USP44-202ENST00000393091 ESCO1Q5FWF5 840 aa18.4■□□□□ 0.54
USP44-202ENST00000393091 KTN1Q86UP2 1357 aaKnown RBP18.4■□□□□ 0.54
USP44-202ENST00000393091 ARHGEF10O15013 1369 aa18.4■□□□□ 0.54
USP44-202ENST00000393091 PSME1Q06323 249 aa18.39■□□□□ 0.53
USP44-202ENST00000393091 NFAT5O94916 1531 aa18.39■□□□□ 0.53
USP44-202ENST00000393091 SLC12A5Q9H2X9 1139 aa18.39■□□□□ 0.53
USP44-202ENST00000393091 SPATA31A3Q5VYP0 1347 aa18.39■□□□□ 0.53
USP44-202ENST00000393091 HDGFL2Q7Z4V5 671 aaPredicted RBP18.38■□□□□ 0.53
USP44-202ENST00000393091 USP19O94966 1318 aa18.38■□□□□ 0.53
USP44-202ENST00000393091 COL18A1P39060 1754 aa18.37■□□□□ 0.53
USP44-202ENST00000393091 SCAF1Q9H7N4 1312 aaKnown RBP18.37■□□□□ 0.53
USP44-202ENST00000393091 CARD14Q9BXL6 1004 aa18.36■□□□□ 0.53
USP44-202ENST00000393091 TTC21BQ7Z4L5 1316 aa18.36■□□□□ 0.53
USP44-202ENST00000393091 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.35■□□□□ 0.53
USP44-202ENST00000393091 SMG6Q86US8 1419 aaKnown RBP18.35■□□□□ 0.53
USP44-202ENST00000393091 NSD3Q9BZ95 1437 aa18.35■□□□□ 0.53
USP44-202ENST00000393091 NWD2Q9ULI1 1742 aa18.35■□□□□ 0.53
USP44-202ENST00000393091 LMO7Q8WWI1 1683 aa18.35■□□□□ 0.53
USP44-202ENST00000393091 PNPLA6Q8IY17 1366 aa18.35■□□□□ 0.53
USP44-202ENST00000393091 KRT28Q7Z3Y7 464 aa18.34■□□□□ 0.53
USP44-202ENST00000393091 LTN1O94822 1766 aa18.34■□□□□ 0.53
USP44-202ENST00000393091 COL14A1Q05707 1796 aaKnown RBP18.33■□□□□ 0.52
USP44-202ENST00000393091 CGNL1Q0VF96 1302 aa18.32■□□□□ 0.52
USP44-202ENST00000393091 FAM208AQ9UK61 1670 aaKnown RBP18.32■□□□□ 0.52
USP44-202ENST00000393091 NGDNQ8NEJ9 315 aaKnown RBP18.32■□□□□ 0.52
USP44-202ENST00000393091 LRRC59Q96AG4 307 aaKnown RBP18.32■□□□□ 0.52
USP44-202ENST00000393091 PANK3Q9H999 370 aa18.32■□□□□ 0.52
USP44-202ENST00000393091 AATKQ6ZMQ8 1374 aa18.31■□□□□ 0.52
USP44-202ENST00000393091 JCADQ9P266 1359 aa18.31■□□□□ 0.52
USP44-202ENST00000393091 PMFBP1Q8TBY8 1022 aa18.31■□□□□ 0.52
USP44-202ENST00000393091 CAMTA1Q9Y6Y1 1673 aa18.3■□□□□ 0.52
USP44-202ENST00000393091 AMER1Q5JTC6 1135 aaPredicted RBP18.3■□□□□ 0.52
USP44-202ENST00000393091 NRAPQ86VF7 1730 aa18.3■□□□□ 0.52
USP44-202ENST00000393091 KIF24Q5T7B8 1368 aa18.3■□□□□ 0.52
USP44-202ENST00000393091 CPDO75976 1380 aa18.29■□□□□ 0.52
USP44-202ENST00000393091 FOXO3O43524 673 aa18.29■□□□□ 0.52
USP44-202ENST00000393091 PLCH1Q4KWH8 1693 aa18.29■□□□□ 0.52
USP44-202ENST00000393091 MAP2P11137 1827 aaKnown RBP18.29■□□□□ 0.52
USP44-202ENST00000393091 SPATA31A6Q5VVP1 1343 aa18.28■□□□□ 0.52
USP44-202ENST00000393091 NUTM2FA1L443 756 aa18.28■□□□□ 0.52
USP44-202ENST00000393091 TMC1Q8TDI8 760 aa18.27■□□□□ 0.52
USP44-202ENST00000393091 PARD3Q8TEW0 1356 aa18.27■□□□□ 0.52
USP44-202ENST00000393091 FYB1O15117 783 aa18.26■□□□□ 0.51
USP44-202ENST00000393091 PEAK1Q9H792 1746 aa18.26■□□□□ 0.51
USP44-202ENST00000393091 INSRP06213 1382 aa18.25■□□□□ 0.51
USP44-202ENST00000393091 RTL1A6NKG5 1358 aa18.23■□□□□ 0.51
USP44-202ENST00000393091 RGPD1P0DJD0 1748 aa18.23■□□□□ 0.51
USP44-202ENST00000393091 WNK3Q9BYP7 1800 aa18.23■□□□□ 0.51
USP44-202ENST00000393091 HSPA1LP34931 641 aa18.22■□□□□ 0.51
USP44-202ENST00000393091 NLRP13Q86W25 1043 aa18.22■□□□□ 0.51
USP44-202ENST00000393091 PIP4K2BP78356 416 aa18.21■□□□□ 0.51
USP44-202ENST00000393091 KNSTRNQ9Y448 316 aa18.21■□□□□ 0.51
USP44-202ENST00000393091 DDX17Q92841 729 aaKnown RBP18.21■□□□□ 0.51
USP44-202ENST00000393091 LRP6O75581 1613 aa18.21■□□□□ 0.5
USP44-202ENST00000393091 RGPD5Q99666 1765 aa18.2■□□□□ 0.5
USP44-202ENST00000393091 CDK12Q9NYV4 1490 aaPredicted RBP18.2■□□□□ 0.5
USP44-202ENST00000393091 KCNH5Q8NCM2 988 aa18.2■□□□□ 0.5
USP44-202ENST00000393091 NME9Q86XW9 330 aa18.18■□□□□ 0.5
USP44-202ENST00000393091 COL3A1P02461 1466 aaPredicted RBP18.18■□□□□ 0.5
USP44-202ENST00000393091 SLIT2O94813 1529 aa18.17■□□□□ 0.5
USP44-202ENST00000393091 NCAPD2Q15021 1401 aa18.17■□□□□ 0.5
USP44-202ENST00000393091 BLMP54132 1417 aaPredicted RBP18.17■□□□□ 0.5
USP44-202ENST00000393091 PLEKHG2Q9H7P9 1386 aa18.17■□□□□ 0.5
USP44-202ENST00000393091 ABTB2Q8N961 1025 aa18.17■□□□□ 0.5
USP44-202ENST00000393091 RALBP1Q15311 655 aa18.16■□□□□ 0.5
USP44-202ENST00000393091 COG3Q96JB2 828 aa18.15■□□□□ 0.5
USP44-202ENST00000393091 DDX10Q13206 875 aaKnown RBP18.14■□□□□ 0.49
USP44-202ENST00000393091 XPCQ01831 940 aaPredicted RBP18.13■□□□□ 0.49
USP44-202ENST00000393091 GCP02774 474 aa18.12■□□□□ 0.49
USP44-202ENST00000393091 ARHGEF25Q86VW2 580 aa18.12■□□□□ 0.49
USP44-202ENST00000393091 NLRP6P59044 892 aa18.12■□□□□ 0.49
USP44-202ENST00000393091 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.11■□□□□ 0.49
USP44-202ENST00000393091 ZRANB1Q9UGI0 708 aa18.1■□□□□ 0.49
USP44-202ENST00000393091 PAK3O75914 559 aaPredicted RBP18.09■□□□□ 0.49
USP44-202ENST00000393091 POLR3GLQ9BT43 218 aa18.09■□□□□ 0.49
USP44-202ENST00000393091 GGNBP2Q9H3C7 697 aa18.09■□□□□ 0.49
USP44-202ENST00000393091 FLT4P35916 1363 aa18.08■□□□□ 0.48
USP44-202ENST00000393091 COL5A2P05997 1499 aaPredicted RBP18.08■□□□□ 0.48
USP44-202ENST00000393091 PRKRIP1Q9H875 184 aaPredicted RBP18.07■□□□□ 0.48
USP44-202ENST00000393091 RGPD2P0DJD1 1756 aa18.07■□□□□ 0.48
USP44-202ENST00000393091 FNBP4Q8N3X1 1017 aaPredicted RBP18.07■□□□□ 0.48
USP44-202ENST00000393091 MORC1Q86VD1 984 aa18.06■□□□□ 0.48
USP44-202ENST00000393091 PARP4Q9UKK3 1724 aaKnown RBP18.06■□□□□ 0.48
USP44-202ENST00000393091 MYBBP1AQ9BQG0 1328 aaKnown RBP18.06■□□□□ 0.48
USP44-202ENST00000393091 THSD7AQ9UPZ6 1657 aa18.06■□□□□ 0.48
USP44-202ENST00000393091 PKD1L3Q7Z443 1732 aa18.06■□□□□ 0.48
USP44-202ENST00000393091 IP6K1Q92551 441 aa18.05■□□□□ 0.48
USP44-202ENST00000393091 POLKQ9UBT6 870 aa18.05■□□□□ 0.48
USP44-202ENST00000393091 BCL9LQ86UU0 1499 aa18.05■□□□□ 0.48
USP44-202ENST00000393091 KIAA0232Q92628 1395 aa18.05■□□□□ 0.48
USP44-202ENST00000393091 MAP3K19Q56UN5 1328 aa18.04■□□□□ 0.48
USP44-202ENST00000393091 ATRNO75882 1429 aa18.04■□□□□ 0.48
USP44-202ENST00000393091 PPP2R1AP30153 589 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms