RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 BCL11BQ9C0K0 894 aaPredicted RBP15.73■□□□□ 0.11
LCA5-202ENST00000392959 GRPEL1Q9HAV7 217 aa15.72■□□□□ 0.11
LCA5-202ENST00000392959 MCM4P33991 863 aa15.72■□□□□ 0.11
LCA5-202ENST00000392959 RUFY1Q96T51 708 aa15.72■□□□□ 0.11
LCA5-202ENST00000392959 PDILTQ8N807 584 aa15.72■□□□□ 0.11
LCA5-202ENST00000392959 HIP1O00291 1037 aa15.72■□□□□ 0.11
LCA5-202ENST00000392959 SYTL4Q96C24 671 aaPredicted RBP15.71■□□□□ 0.11
LCA5-202ENST00000392959 CIZ1Q9ULV3 898 aaPredicted RBP15.71■□□□□ 0.11
LCA5-202ENST00000392959 CYB5RLQ6IPT4 315 aa15.7■□□□□ 0.1
LCA5-202ENST00000392959 FMNL2Q96PY5 1086 aa15.7■□□□□ 0.1
LCA5-202ENST00000392959 NLRP2Q9NX02 1062 aa15.7■□□□□ 0.1
LCA5-202ENST00000392959 SLC4A2P04920 1241 aa15.7■□□□□ 0.1
LCA5-202ENST00000392959 NUTM2GQ5VZR2 741 aa15.7■□□□□ 0.1
LCA5-202ENST00000392959 ANO8Q9HCE9 1232 aaPredicted RBP15.7■□□□□ 0.1
LCA5-202ENST00000392959 AK7Q96M32 723 aa15.69■□□□□ 0.1
LCA5-202ENST00000392959 PRM3Q9NNZ6 103 aa15.69■□□□□ 0.1
LCA5-202ENST00000392959 XBP1P17861 261 aa15.69■□□□□ 0.1
LCA5-202ENST00000392959 NAP1L1P55209 391 aaKnown RBP15.69■□□□□ 0.1
LCA5-202ENST00000392959 CHD1LQ86WJ1 897 aa15.69■□□□□ 0.1
LCA5-202ENST00000392959 WDR33Q9C0J8 1336 aaKnown RBP15.69■□□□□ 0.1
LCA5-202ENST00000392959 WWC1Q8IX03 1113 aa15.69■□□□□ 0.1
LCA5-202ENST00000392959 SMC2O95347 1197 aa15.68■□□□□ 0.1
LCA5-202ENST00000392959 CDR1P51861 262 aa15.68■□□□□ 0.1
LCA5-202ENST00000392959 ERC1Q8IUD2 1116 aa15.68■□□□□ 0.1
LCA5-202ENST00000392959 BRMS1Q9HCU9 246 aa15.68■□□□□ 0.1
LCA5-202ENST00000392959 ESPNB1AK53 854 aa15.68■□□□□ 0.1
LCA5-202ENST00000392959 CCDC192P0DO97 292 aa15.68■□□□□ 0.1
LCA5-202ENST00000392959 CCT4P50991 539 aaKnown RBP15.68■□□□□ 0.1
LCA5-202ENST00000392959 TRIM34Q9BYJ4 488 aa15.68■□□□□ 0.1
LCA5-202ENST00000392959 TCEAL9Q9UHQ7 104 aa15.68■□□□□ 0.1
LCA5-202ENST00000392959 CYP46A1Q9Y6A2 500 aa15.68■□□□□ 0.1
LCA5-202ENST00000392959 PATL2C9JE40 543 aaKnown RBP15.67■□□□□ 0.1
LCA5-202ENST00000392959 PRAM1Q96QH2 718 aa15.67■□□□□ 0.1
LCA5-202ENST00000392959 DNAJC2Q99543 621 aaKnown RBP15.67■□□□□ 0.1
LCA5-202ENST00000392959 LRRCC1Q9C099 1032 aa15.67■□□□□ 0.1
LCA5-202ENST00000392959 AQRO60306 1485 aaKnown RBP eCLIP15.67■□□□□ 0.1
LCA5-202ENST00000392959 RBM10P98175 930 aaKnown RBP15.67■□□□□ 0.1
LCA5-202ENST00000392959 HDGFL1Q5TGJ6 251 aa15.67■□□□□ 0.1
LCA5-202ENST00000392959 SPC24Q8NBT2 197 aa15.67■□□□□ 0.1
LCA5-202ENST00000392959 PRDM2Q13029 1718 aa15.67■□□□□ 0.1
LCA5-202ENST00000392959 WDR97A6NE52 1622 aa15.67■□□□□ 0.1
LCA5-202ENST00000392959 ATP2B1P20020 1258 aa15.66■□□□□ 0.1
LCA5-202ENST00000392959 STK38Q15208 465 aa15.66■□□□□ 0.1
LCA5-202ENST00000392959 ZNF396Q96N95 335 aaPredicted RBP15.66■□□□□ 0.1
LCA5-202ENST00000392959 SULT6B1Q6IMI4 303 aa15.66■□□□□ 0.1
LCA5-202ENST00000392959 SART3Q15020 963 aaKnown RBP15.66■□□□□ 0.1
LCA5-202ENST00000392959 OFD1O75665 1012 aa15.66■□□□□ 0.1
LCA5-202ENST00000392959 NOM1Q5C9Z4 860 aaKnown RBP15.66■□□□□ 0.1
LCA5-202ENST00000392959 SLFN5Q08AF3 891 aa15.65■□□□□ 0.1
LCA5-202ENST00000392959 AEBP1Q8IUX7 1158 aa15.65■□□□□ 0.1
LCA5-202ENST00000392959 KRT85P78386 507 aa15.65■□□□□ 0.1
LCA5-202ENST00000392959 CEBPZQ03701 1054 aaKnown RBP15.65■□□□□ 0.1
LCA5-202ENST00000392959 ERBINQ96RT1 1412 aa15.65■□□□□ 0.1
LCA5-202ENST00000392959 ZNF428Q96B54 188 aa15.65■□□□□ 0.1
LCA5-202ENST00000392959 TBC1D2BQ9UPU7 963 aa15.65■□□□□ 0.1
LCA5-202ENST00000392959 CCP110O43303 1012 aa15.64■□□□□ 0.09
LCA5-202ENST00000392959 C9orf84Q5VXU9 1444 aa15.64■□□□□ 0.09
LCA5-202ENST00000392959 MPNDQ8N594 471 aa15.64■□□□□ 0.09
LCA5-202ENST00000392959 ERCC4Q92889 916 aaPredicted RBP15.64■□□□□ 0.09
LCA5-202ENST00000392959 ARHGAP5Q13017 1502 aa15.64■□□□□ 0.09
LCA5-202ENST00000392959 PRXQ9BXM0 1461 aa15.63■□□□□ 0.09
LCA5-202ENST00000392959 ANKRD1Q15327 319 aa15.63■□□□□ 0.09
LCA5-202ENST00000392959 PLEKHO1Q53GL0 409 aaPredicted RBP15.63■□□□□ 0.09
LCA5-202ENST00000392959 OSCARQ8IYS5 282 aa15.63■□□□□ 0.09
LCA5-202ENST00000392959 CCDC66A2RUB6 948 aa15.63■□□□□ 0.09
LCA5-202ENST00000392959 FILIP1LQ4L180 1135 aa15.63■□□□□ 0.09
LCA5-202ENST00000392959 SRCIN1Q9C0H9 1055 aa15.63■□□□□ 0.09
LCA5-202ENST00000392959 TTLL5Q6EMB2 1281 aa15.63■□□□□ 0.09
LCA5-202ENST00000392959 ABTB2Q8N961 1025 aa15.63■□□□□ 0.09
LCA5-202ENST00000392959 TNMDQ9H2S6 317 aa15.63■□□□□ 0.09
LCA5-202ENST00000392959 CABP1Q9NZU7 370 aa15.63■□□□□ 0.09
LCA5-202ENST00000392959 JMYQ8N9B5 988 aa15.63■□□□□ 0.09
LCA5-202ENST00000392959 LARP1BQ659C4 914 aaKnown RBP15.62■□□□□ 0.09
LCA5-202ENST00000392959 CAGE1Q8TC20 777 aa15.62■□□□□ 0.09
LCA5-202ENST00000392959 FYB1O15117 783 aa15.62■□□□□ 0.09
LCA5-202ENST00000392959 KDM4AO75164 1064 aa15.62■□□□□ 0.09
LCA5-202ENST00000392959 RPAP2Q8IXW5 612 aaPredicted RBP15.61■□□□□ 0.09
LCA5-202ENST00000392959 CWC15Q9P013 229 aaKnown RBP15.61■□□□□ 0.09
LCA5-202ENST00000392959 CCDC112Q8NEF3 446 aa15.61■□□□□ 0.09
LCA5-202ENST00000392959 CCDC43Q96MW1 224 aaKnown RBP15.61■□□□□ 0.09
LCA5-202ENST00000392959 CTDP1Q9Y5B0 961 aaPredicted RBP15.61■□□□□ 0.09
LCA5-202ENST00000392959 NCAPD3P42695 1498 aa15.61■□□□□ 0.09
LCA5-202ENST00000392959 SMARCE1Q969G3 411 aa15.6■□□□□ 0.09
LCA5-202ENST00000392959 MSH5O43196 834 aa15.6■□□□□ 0.09
LCA5-202ENST00000392959 DHX8Q14562 1220 aaKnown RBP15.6■□□□□ 0.09
LCA5-202ENST00000392959 EHBP1L1Q8N3D4 1523 aa15.6■□□□□ 0.09
LCA5-202ENST00000392959 ME1P48163 572 aa15.6■□□□□ 0.09
LCA5-202ENST00000392959 FAM69CQ0P6D2 419 aa15.6■□□□□ 0.09
LCA5-202ENST00000392959 STK3Q13188 491 aa15.6■□□□□ 0.09
LCA5-202ENST00000392959 ZNF692Q9BU19 519 aaPredicted RBP15.6■□□□□ 0.09
LCA5-202ENST00000392959 CDK19Q9BWU1 502 aa15.6■□□□□ 0.09
LCA5-202ENST00000392959 SYNJ2O15056 1496 aa15.6■□□□□ 0.09
LCA5-202ENST00000392959 CT47A1Q5JQC4 288 aaPredicted RBP15.59■□□□□ 0.09
LCA5-202ENST00000392959 EFCAB5A4FU69 1503 aa15.59■□□□□ 0.09
LCA5-202ENST00000392959 BLOC1S2Q6QNY1 142 aa15.59■□□□□ 0.09
LCA5-202ENST00000392959 RBM33Q96EV2 1170 aaKnown RBP15.59■□□□□ 0.09
LCA5-202ENST00000392959 SYNJ1O43426 1573 aa15.59■□□□□ 0.09
LCA5-202ENST00000392959 FCHSD2O94868 740 aa15.59■□□□□ 0.09
LCA5-202ENST00000392959 TMEM57Q8N5G2 664 aa15.59■□□□□ 0.09
LCA5-202ENST00000392959 SERPINC1P01008 464 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms