RNA–Protein interactions for RNA: ENST00000392927.7

SYCP3-203, Transcript of synaptonemal complex protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYCP3, Length 1,120 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP3-203ENST00000392927 FNBP4Q8N3X1 1017 aaPredicted RBP17.48■□□□□ 0.39
SYCP3-203ENST00000392927 NGDNQ8NEJ9 315 aaKnown RBP17.48■□□□□ 0.39
SYCP3-203ENST00000392927 QTRT2Q9H974 415 aaKnown RBP17.48■□□□□ 0.39
SYCP3-203ENST00000392927 NWD2Q9ULI1 1742 aa17.47■□□□□ 0.39
SYCP3-203ENST00000392927 ATRNO75882 1429 aa17.47■□□□□ 0.39
SYCP3-203ENST00000392927 RALGAPBQ86X10 1494 aa17.46■□□□□ 0.39
SYCP3-203ENST00000392927 RBM6P78332 1123 aaKnown RBP17.46■□□□□ 0.39
SYCP3-203ENST00000392927 CABLES1Q8TDN4 633 aa17.46■□□□□ 0.39
SYCP3-203ENST00000392927 PHRF1Q9P1Y6 1649 aaKnown RBP17.46■□□□□ 0.39
SYCP3-203ENST00000392927 SLIT2O94813 1529 aa17.46■□□□□ 0.39
SYCP3-203ENST00000392927 BCL9LQ86UU0 1499 aa17.45■□□□□ 0.38
SYCP3-203ENST00000392927 SRPK2P78362 688 aaKnown RBP17.44■□□□□ 0.38
SYCP3-203ENST00000392927 NBPF8Q3BBV2 869 aa17.44■□□□□ 0.38
SYCP3-203ENST00000392927 TRPC5Q9UL62 973 aaPredicted RBP17.44■□□□□ 0.38
SYCP3-203ENST00000392927 PPIP5K1Q6PFW1 1433 aa17.44■□□□□ 0.38
SYCP3-203ENST00000392927 POLR3AO14802 1390 aaPredicted RBP17.43■□□□□ 0.38
SYCP3-203ENST00000392927 PAK3O75914 559 aaPredicted RBP17.43■□□□□ 0.38
SYCP3-203ENST00000392927 CCDC61Q9Y6R9 512 aa17.43■□□□□ 0.38
SYCP3-203ENST00000392927 NRAPQ86VF7 1730 aa17.42■□□□□ 0.38
SYCP3-203ENST00000392927 ACEP12821 1306 aa17.42■□□□□ 0.38
SYCP3-203ENST00000392927 COL14A1Q05707 1796 aaKnown RBP17.41■□□□□ 0.38
SYCP3-203ENST00000392927 CABP2Q9NPB3 220 aa17.41■□□□□ 0.38
SYCP3-203ENST00000392927 GLI3P10071 1580 aa17.4■□□□□ 0.38
SYCP3-203ENST00000392927 PLEKHG3A1L390 1219 aa17.39■□□□□ 0.37
SYCP3-203ENST00000392927 NRKQ7Z2Y5 1582 aa17.38■□□□□ 0.37
SYCP3-203ENST00000392927 UNC5CLQ8IV45 518 aa17.38■□□□□ 0.37
SYCP3-203ENST00000392927 EVC2Q86UK5 1308 aa17.38■□□□□ 0.37
SYCP3-203ENST00000392927 CARD11Q9BXL7 1154 aa17.37■□□□□ 0.37
SYCP3-203ENST00000392927 AKAP12Q02952 1782 aa17.37■□□□□ 0.37
SYCP3-203ENST00000392927 GJD4Q96KN9 370 aaPredicted RBP17.35■□□□□ 0.37
SYCP3-203ENST00000392927 SBNO2Q9Y2G9 1366 aa17.35■□□□□ 0.37
SYCP3-203ENST00000392927 USP6P35125 1406 aa17.34■□□□□ 0.37
SYCP3-203ENST00000392927 EP400Q96L91 3159 aa17.34■□□□□ 0.37
SYCP3-203ENST00000392927 PIK3C2AO00443 1686 aa17.33■□□□□ 0.37
SYCP3-203ENST00000392927 NUTM2GQ5VZR2 741 aa17.33■□□□□ 0.36
SYCP3-203ENST00000392927 UPF1Q92900 1129 aaKnown RBP eCLIP17.33■□□□□ 0.36
SYCP3-203ENST00000392927 BRWD3Q6RI45 1802 aa17.33■□□□□ 0.36
SYCP3-203ENST00000392927 ATAD2Q6PL18 1390 aa17.32■□□□□ 0.36
SYCP3-203ENST00000392927 FAM83GA6ND36 823 aa17.32■□□□□ 0.36
SYCP3-203ENST00000392927 CABP1Q9NZU7 370 aa17.32■□□□□ 0.36
SYCP3-203ENST00000392927 MON2Q7Z3U7 1717 aa17.32■□□□□ 0.36
SYCP3-203ENST00000392927 BRD4O60885 1362 aaPredicted RBP17.31■□□□□ 0.36
SYCP3-203ENST00000392927 VPS72Q15906 364 aa17.31■□□□□ 0.36
SYCP3-203ENST00000392927 PRDM11Q9NQV5 511 aa17.31■□□□□ 0.36
SYCP3-203ENST00000392927 KIAA0232Q92628 1395 aa17.3■□□□□ 0.36
SYCP3-203ENST00000392927 ABTB2Q8N961 1025 aa17.3■□□□□ 0.36
SYCP3-203ENST00000392927 BTG4Q9NY30 223 aa17.3■□□□□ 0.36
SYCP3-203ENST00000392927 CCDC9Q9Y3X0 531 aaKnown RBP17.3■□□□□ 0.36
SYCP3-203ENST00000392927 USP19O94966 1318 aa17.29■□□□□ 0.36
SYCP3-203ENST00000392927 PCGF6Q9BYE7 350 aa17.29■□□□□ 0.36
SYCP3-203ENST00000392927 LMO7Q8WWI1 1683 aa17.28■□□□□ 0.36
SYCP3-203ENST00000392927 SSH2Q76I76 1423 aa17.28■□□□□ 0.36
SYCP3-203ENST00000392927 SLIT3O75094 1523 aa17.27■□□□□ 0.36
SYCP3-203ENST00000392927 ZC3H6P61129 1189 aaKnown RBP17.26■□□□□ 0.35
SYCP3-203ENST00000392927 CHRNA2Q15822 529 aa17.26■□□□□ 0.35
SYCP3-203ENST00000392927 CPSF1Q10570 1443 aaKnown RBP17.25■□□□□ 0.35
SYCP3-203ENST00000392927 NLRP13Q86W25 1043 aa17.25■□□□□ 0.35
SYCP3-203ENST00000392927 CLSPNQ9HAW4 1339 aa17.24■□□□□ 0.35
SYCP3-203ENST00000392927 THSD7AQ9UPZ6 1657 aa17.24■□□□□ 0.35
SYCP3-203ENST00000392927 CPDO75976 1380 aa17.24■□□□□ 0.35
SYCP3-203ENST00000392927 KTN1Q86UP2 1357 aaKnown RBP17.24■□□□□ 0.35
SYCP3-203ENST00000392927 CD163L1Q9NR16 1453 aa17.23■□□□□ 0.35
SYCP3-203ENST00000392927 USP54Q70EL1 1684 aa17.23■□□□□ 0.35
SYCP3-203ENST00000392927 CAMTA1Q9Y6Y1 1673 aa17.23■□□□□ 0.35
SYCP3-203ENST00000392927 A0A0G2JS52 829 aa17.22■□□□□ 0.35
SYCP3-203ENST00000392927 MYT1Q01538 1121 aa17.22■□□□□ 0.35
SYCP3-203ENST00000392927 SEPT12Q8IYM1 358 aa17.22■□□□□ 0.35
SYCP3-203ENST00000392927 USP47Q96K76 1375 aa17.22■□□□□ 0.35
SYCP3-203ENST00000392927 SPATA31A5Q5VU36 1347 aa17.21■□□□□ 0.35
SYCP3-203ENST00000392927 TTC21BQ7Z4L5 1316 aa17.21■□□□□ 0.35
SYCP3-203ENST00000392927 SPATA31A7Q8IWB4 1347 aa17.21■□□□□ 0.35
SYCP3-203ENST00000392927 ST20-MTHFSA0A0A6YYL1 179 aa17.21■□□□□ 0.35
SYCP3-203ENST00000392927 GCP02774 474 aa17.21■□□□□ 0.35
SYCP3-203ENST00000392927 NLRP6P59044 892 aa17.21■□□□□ 0.35
SYCP3-203ENST00000392927 FAM98CQ17RN3 349 aaKnown RBP17.21■□□□□ 0.35
SYCP3-203ENST00000392927 ZNF692Q9BU19 519 aaPredicted RBP17.21■□□□□ 0.35
SYCP3-203ENST00000392927 TMC1Q8TDI8 760 aa17.2■□□□□ 0.34
SYCP3-203ENST00000392927 STRN4Q9NRL3 753 aa17.2■□□□□ 0.34
SYCP3-203ENST00000392927 TTC21AQ8NDW8 1320 aa17.2■□□□□ 0.34
SYCP3-203ENST00000392927 TESK2Q96S53 571 aa17.19■□□□□ 0.34
SYCP3-203ENST00000392927 COL5A2P05997 1499 aaPredicted RBP17.18■□□□□ 0.34
SYCP3-203ENST00000392927 COL18A1P39060 1754 aa17.18■□□□□ 0.34
SYCP3-203ENST00000392927 NFAT5O94916 1531 aa17.18■□□□□ 0.34
SYCP3-203ENST00000392927 ZBTB7CA1YPR0 619 aa17.18■□□□□ 0.34
SYCP3-203ENST00000392927 ONECUT3O60422 494 aaPredicted RBP17.18■□□□□ 0.34
SYCP3-203ENST00000392927 A0A1W2PP64 1363 aa17.17■□□□□ 0.34
SYCP3-203ENST00000392927 TIMELESSQ9UNS1 1208 aa17.17■□□□□ 0.34
SYCP3-203ENST00000392927 SPATA31A1Q5TZJ5 1347 aa17.17■□□□□ 0.34
SYCP3-203ENST00000392927 NINLQ9Y2I6 1382 aa17.16■□□□□ 0.34
SYCP3-203ENST00000392927 EDC4Q6P2E9 1401 aaKnown RBP17.16■□□□□ 0.34
SYCP3-203ENST00000392927 RGPD5Q99666 1765 aa17.16■□□□□ 0.34
SYCP3-203ENST00000392927 KRT27Q7Z3Y8 459 aa17.16■□□□□ 0.34
SYCP3-203ENST00000392927 HDGFL2Q7Z4V5 671 aaPredicted RBP17.16■□□□□ 0.34
SYCP3-203ENST00000392927 LTN1O94822 1766 aa17.15■□□□□ 0.34
SYCP3-203ENST00000392927 WNK3Q9BYP7 1800 aa17.15■□□□□ 0.34
SYCP3-203ENST00000392927 EVA1CP58658 441 aa17.15■□□□□ 0.34
SYCP3-203ENST00000392927 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.15■□□□□ 0.34
SYCP3-203ENST00000392927 CCER1Q8TC90 406 aaPredicted RBP17.15■□□□□ 0.34
SYCP3-203ENST00000392927 PUS7Q96PZ0 661 aaKnown RBP17.15■□□□□ 0.34
SYCP3-203ENST00000392927 SLC12A5Q9H2X9 1139 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms