RNA–Protein interactions for RNA: ENST00000392597.5

PTPN11-202, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 1 (best) BASIC

Gene PTPN11, Length 1,876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-202ENST00000392597 CCDC61Q9Y6R9 512 aa26.4■■□□□ 1.82
PTPN11-202ENST00000392597 CHD2O14647 1828 aaKnown RBP26.4■■□□□ 1.82
PTPN11-202ENST00000392597 COL3A1P02461 1466 aaPredicted RBP26.4■■□□□ 1.82
PTPN11-202ENST00000392597 MON2Q7Z3U7 1717 aa26.39■■□□□ 1.82
PTPN11-202ENST00000392597 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.39■■□□□ 1.81
PTPN11-202ENST00000392597 AKAP12Q02952 1782 aa26.38■■□□□ 1.81
PTPN11-202ENST00000392597 PTCH1Q13635 1447 aa26.38■■□□□ 1.81
PTPN11-202ENST00000392597 PTPRUQ92729 1446 aa26.38■■□□□ 1.81
PTPN11-202ENST00000392597 NWD1Q149M9 1564 aa26.37■■□□□ 1.81
PTPN11-202ENST00000392597 XRN1Q8IZH2 1706 aaKnown RBP26.37■■□□□ 1.81
PTPN11-202ENST00000392597 E9PSI1 815 aa26.36■■□□□ 1.81
PTPN11-202ENST00000392597 ITSN1Q15811 1721 aa26.36■■□□□ 1.81
PTPN11-202ENST00000392597 PNPLA6Q8IY17 1366 aa26.36■■□□□ 1.81
PTPN11-202ENST00000392597 B4GALNT3Q6L9W6 998 aa26.35■■□□□ 1.81
PTPN11-202ENST00000392597 TOPAZ1Q8N9V7 1692 aa26.35■■□□□ 1.81
PTPN11-202ENST00000392597 AMOTL2Q9Y2J4 779 aa26.34■■□□□ 1.81
PTPN11-202ENST00000392597 KCNA6P17658 529 aa26.33■■□□□ 1.81
PTPN11-202ENST00000392597 ZNF692Q9BU19 519 aaPredicted RBP26.33■■□□□ 1.81
PTPN11-202ENST00000392597 PHF23Q9BUL5 403 aaPredicted RBP26.32■■□□□ 1.8
PTPN11-202ENST00000392597 NKTRP30414 1462 aaKnown RBP26.32■■□□□ 1.8
PTPN11-202ENST00000392597 CCDC27Q2M243 656 aa26.32■■□□□ 1.8
PTPN11-202ENST00000392597 WWC1Q8IX03 1113 aa26.32■■□□□ 1.8
PTPN11-202ENST00000392597 PRR36Q9H6K5 1346 aa26.31■■□□□ 1.8
PTPN11-202ENST00000392597 TCP11L2Q8N4U5 519 aa26.31■■□□□ 1.8
PTPN11-202ENST00000392597 U2AF1L5P0DN76 240 aaPredicted RBP26.3■■□□□ 1.8
PTPN11-202ENST00000392597 U2AF1Q01081 240 aaKnown RBP eCLIP26.3■■□□□ 1.8
PTPN11-202ENST00000392597 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.3■■□□□ 1.8
PTPN11-202ENST00000392597 CCDC136Q96JN2 1154 aa26.28■■□□□ 1.8
PTPN11-202ENST00000392597 STRCP1A6NGW2 1772 aa26.28■■□□□ 1.8
PTPN11-202ENST00000392597 AATKQ6ZMQ8 1374 aa26.27■■□□□ 1.8
PTPN11-202ENST00000392597 ZNF335Q9H4Z2 1342 aaPredicted RBP26.27■■□□□ 1.8
PTPN11-202ENST00000392597 PLEKHG3A1L390 1219 aa26.26■■□□□ 1.79
PTPN11-202ENST00000392597 WDR63Q8IWG1 891 aa26.26■■□□□ 1.79
PTPN11-202ENST00000392597 SPINK5Q9NQ38 1064 aaPredicted RBP26.26■■□□□ 1.79
PTPN11-202ENST00000392597 DIAPH1O60610 1272 aaKnown RBP26.25■■□□□ 1.79
PTPN11-202ENST00000392597 NRKQ7Z2Y5 1582 aa26.25■■□□□ 1.79
PTPN11-202ENST00000392597 MAP2P11137 1827 aaKnown RBP26.24■■□□□ 1.79
PTPN11-202ENST00000392597 POLKQ9UBT6 870 aa26.23■■□□□ 1.79
PTPN11-202ENST00000392597 EXOC6Q8TAG9 804 aa26.23■■□□□ 1.79
PTPN11-202ENST00000392597 PNNQ9H307 717 aaKnown RBP26.23■■□□□ 1.79
PTPN11-202ENST00000392597 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.22■■□□□ 1.79
PTPN11-202ENST00000392597 NME9Q86XW9 330 aa26.21■■□□□ 1.79
PTPN11-202ENST00000392597 PLEKHF1Q96S99 279 aa26.21■■□□□ 1.79
PTPN11-202ENST00000392597 CDK12Q9NYV4 1490 aaPredicted RBP26.21■■□□□ 1.79
PTPN11-202ENST00000392597 U2SURPO15042 1029 aaKnown RBP26.21■■□□□ 1.79
PTPN11-202ENST00000392597 COG3Q96JB2 828 aa26.21■■□□□ 1.79
PTPN11-202ENST00000392597 RRP7AQ9Y3A4 280 aaKnown RBP26.19■■□□□ 1.78
PTPN11-202ENST00000392597 PLIN1O60240 522 aa26.18■■□□□ 1.78
PTPN11-202ENST00000392597 USP6P35125 1406 aa26.17■■□□□ 1.78
PTPN11-202ENST00000392597 ACEP12821 1306 aa26.17■■□□□ 1.78
PTPN11-202ENST00000392597 NEUROD2Q15784 382 aa26.17■■□□□ 1.78
PTPN11-202ENST00000392597 LTBP4Q8N2S1 1624 aa26.16■■□□□ 1.78
PTPN11-202ENST00000392597 MAPK8IP3Q9UPT6 1336 aa26.16■■□□□ 1.78
PTPN11-202ENST00000392597 NCOA3Q9Y6Q9 1424 aa26.16■■□□□ 1.78
PTPN11-202ENST00000392597 TTC21BQ7Z4L5 1316 aa26.15■■□□□ 1.78
PTPN11-202ENST00000392597 FCHSD2O94868 740 aa26.15■■□□□ 1.78
PTPN11-202ENST00000392597 ANKARQ7Z5J8 1434 aa26.15■■□□□ 1.78
PTPN11-202ENST00000392597 LRRC7Q96NW7 1537 aa26.15■■□□□ 1.78
PTPN11-202ENST00000392597 PROSER2Q86WR7 435 aaPredicted RBP26.15■■□□□ 1.78
PTPN11-202ENST00000392597 SSH2Q76I76 1423 aa26.13■■□□□ 1.77
PTPN11-202ENST00000392597 TMEM94Q12767 1356 aa26.13■■□□□ 1.77
PTPN11-202ENST00000392597 OVOS2A0A0J9YW53 1432 aa26.13■■□□□ 1.77
PTPN11-202ENST00000392597 TMPOP42166 694 aaKnown RBP26.13■■□□□ 1.77
PTPN11-202ENST00000392597 OVOS2Q6IE36 1432 aa26.13■■□□□ 1.77
PTPN11-202ENST00000392597 CRBNQ96SW2 442 aa26.12■■□□□ 1.77
PTPN11-202ENST00000392597 MYH16Q9H6N6 1097 aa26.12■■□□□ 1.77
PTPN11-202ENST00000392597 NALCNQ8IZF0 1738 aa26.12■■□□□ 1.77
PTPN11-202ENST00000392597 ZRANB1Q9UGI0 708 aa26.11■■□□□ 1.77
PTPN11-202ENST00000392597 ADGRL3Q9HAR2 1447 aa26.1■■□□□ 1.77
PTPN11-202ENST00000392597 EMILIN1Q9Y6C2 1016 aa26.1■■□□□ 1.77
PTPN11-202ENST00000392597 TTC21AQ8NDW8 1320 aa26.1■■□□□ 1.77
PTPN11-202ENST00000392597 PPM1GO15355 546 aaPredicted RBP26.09■■□□□ 1.77
PTPN11-202ENST00000392597 XIRP1Q702N8 1843 aaKnown RBP26.09■■□□□ 1.77
PTPN11-202ENST00000392597 FMN2Q9NZ56 1722 aa26.09■■□□□ 1.77
PTPN11-202ENST00000392597 FBLN1P23142 703 aa26.08■■□□□ 1.77
PTPN11-202ENST00000392597 IL16Q14005 1332 aa26.08■■□□□ 1.77
PTPN11-202ENST00000392597 IL13P35225 146 aa26.08■■□□□ 1.77
PTPN11-202ENST00000392597 RBM33Q96EV2 1170 aaKnown RBP26.08■■□□□ 1.77
PTPN11-202ENST00000392597 RSPH6AQ9H0K4 717 aa26.08■■□□□ 1.77
PTPN11-202ENST00000392597 RGPD8O14715 1765 aaPredicted RBP26.07■■□□□ 1.76
PTPN11-202ENST00000392597 NUTM2FA1L443 756 aa26.06■■□□□ 1.76
PTPN11-202ENST00000392597 C20orf194Q5TEA3 1177 aa26.06■■□□□ 1.76
PTPN11-202ENST00000392597 USP31Q70CQ4 1352 aa26.06■■□□□ 1.76
PTPN11-202ENST00000392597 TRIM35Q9UPQ4 493 aa26.06■■□□□ 1.76
PTPN11-202ENST00000392597 RBM19Q9Y4C8 960 aaKnown RBP26.06■■□□□ 1.76
PTPN11-202ENST00000392597 NEFMP07197 916 aa26.04■■□□□ 1.76
PTPN11-202ENST00000392597 CT47B1P0C2W7 299 aaPredicted RBP26.04■■□□□ 1.76
PTPN11-202ENST00000392597 C14orf37Q86TY3 774 aa26.04■■□□□ 1.76
PTPN11-202ENST00000392597 BCAR3O75815 825 aa26.03■■□□□ 1.76
PTPN11-202ENST00000392597 C19orf44Q9H6X5 657 aa26.03■■□□□ 1.76
PTPN11-202ENST00000392597 DCCP43146 1447 aa26.03■■□□□ 1.76
PTPN11-202ENST00000392597 PRKAR2BP31323 418 aa26.02■■□□□ 1.76
PTPN11-202ENST00000392597 RIPK4P57078 832 aa26.02■■□□□ 1.76
PTPN11-202ENST00000392597 PDE3AQ14432 1141 aa26.02■■□□□ 1.76
PTPN11-202ENST00000392597 RRS1Q15050 365 aaKnown RBP26.02■■□□□ 1.76
PTPN11-202ENST00000392597 MSH6P52701 1360 aa26.01■■□□□ 1.75
PTPN11-202ENST00000392597 RARSP54136 660 aaKnown RBP26■■□□□ 1.75
PTPN11-202ENST00000392597 NGDNQ8NEJ9 315 aaKnown RBP26■■□□□ 1.75
PTPN11-202ENST00000392597 PMFBP1Q8TBY8 1022 aa25.98■■□□□ 1.75
PTPN11-202ENST00000392597 FANCIQ9NVI1 1328 aa25.97■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms