RNA–Protein interactions for RNA: ENST00000392345.6

CCDC57-204, Transcript of coiled-coil domain containing 57, humanhuman

APPRIS ALT2 TSL 3

Gene CCDC57, Length 678 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-204ENST00000392345 PAK3O75914 559 aaPredicted RBP19.88■□□□□ 0.77
CCDC57-204ENST00000392345 HAP1P54257 671 aaPredicted RBP19.88■□□□□ 0.77
CCDC57-204ENST00000392345 PCGF6Q9BYE7 350 aa19.88■□□□□ 0.77
CCDC57-204ENST00000392345 CRYBG1Q9Y4K1 1723 aa19.87■□□□□ 0.77
CCDC57-204ENST00000392345 CARD11Q9BXL7 1154 aa19.86■□□□□ 0.77
CCDC57-204ENST00000392345 TRPC5Q9UL62 973 aaPredicted RBP19.86■□□□□ 0.77
CCDC57-204ENST00000392345 NUTM2GQ5VZR2 741 aa19.84■□□□□ 0.77
CCDC57-204ENST00000392345 PLCH1Q4KWH8 1693 aa19.84■□□□□ 0.77
CCDC57-204ENST00000392345 EVC2Q86UK5 1308 aa19.83■□□□□ 0.77
CCDC57-204ENST00000392345 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.83■□□□□ 0.77
CCDC57-204ENST00000392345 UNC5CLQ8IV45 518 aa19.83■□□□□ 0.77
CCDC57-204ENST00000392345 CABP1Q9NZU7 370 aa19.83■□□□□ 0.77
CCDC57-204ENST00000392345 FAM83GA6ND36 823 aa19.82■□□□□ 0.76
CCDC57-204ENST00000392345 GLI3P10071 1580 aa19.81■□□□□ 0.76
CCDC57-204ENST00000392345 PHRF1Q9P1Y6 1649 aaKnown RBP19.8■□□□□ 0.76
CCDC57-204ENST00000392345 SBNO2Q9Y2G9 1366 aa19.8■□□□□ 0.76
CCDC57-204ENST00000392345 GJD4Q96KN9 370 aaPredicted RBP19.79■□□□□ 0.76
CCDC57-204ENST00000392345 EP400Q96L91 3159 aa19.79■□□□□ 0.76
CCDC57-204ENST00000392345 NRAPQ86VF7 1730 aa19.79■□□□□ 0.76
CCDC57-204ENST00000392345 USP6P35125 1406 aa19.78■□□□□ 0.76
CCDC57-204ENST00000392345 NWD2Q9ULI1 1742 aa19.78■□□□□ 0.76
CCDC57-204ENST00000392345 UPF1Q92900 1129 aaKnown RBP eCLIP19.77■□□□□ 0.76
CCDC57-204ENST00000392345 NRKQ7Z2Y5 1582 aa19.77■□□□□ 0.76
CCDC57-204ENST00000392345 KIAA0232Q92628 1395 aa19.76■□□□□ 0.75
CCDC57-204ENST00000392345 SSH2Q76I76 1423 aa19.76■□□□□ 0.75
CCDC57-204ENST00000392345 COL14A1Q05707 1796 aaKnown RBP19.75■□□□□ 0.75
CCDC57-204ENST00000392345 ABTB2Q8N961 1025 aa19.75■□□□□ 0.75
CCDC57-204ENST00000392345 BTG4Q9NY30 223 aa19.75■□□□□ 0.75
CCDC57-204ENST00000392345 USP19O94966 1318 aa19.75■□□□□ 0.75
CCDC57-204ENST00000392345 ATAD2Q6PL18 1390 aa19.74■□□□□ 0.75
CCDC57-204ENST00000392345 VPS72Q15906 364 aa19.74■□□□□ 0.75
CCDC57-204ENST00000392345 PRDM11Q9NQV5 511 aa19.74■□□□□ 0.75
CCDC57-204ENST00000392345 CHRNA2Q15822 529 aa19.73■□□□□ 0.75
CCDC57-204ENST00000392345 PIK3C2AO00443 1686 aa19.72■□□□□ 0.75
CCDC57-204ENST00000392345 ZC3H6P61129 1189 aaKnown RBP19.72■□□□□ 0.75
CCDC57-204ENST00000392345 ST20-MTHFSA0A0A6YYL1 179 aa19.71■□□□□ 0.75
CCDC57-204ENST00000392345 TESK2Q96S53 571 aa19.71■□□□□ 0.75
CCDC57-204ENST00000392345 CCDC9Q9Y3X0 531 aaKnown RBP19.71■□□□□ 0.75
CCDC57-204ENST00000392345 CLSPNQ9HAW4 1339 aa19.71■□□□□ 0.75
CCDC57-204ENST00000392345 BRD4O60885 1362 aaPredicted RBP19.7■□□□□ 0.74
CCDC57-204ENST00000392345 AKAP12Q02952 1782 aa19.7■□□□□ 0.74
CCDC57-204ENST00000392345 CPSF1Q10570 1443 aaKnown RBP19.7■□□□□ 0.74
CCDC57-204ENST00000392345 CD163L1Q9NR16 1453 aa19.7■□□□□ 0.74
CCDC57-204ENST00000392345 TTC21BQ7Z4L5 1316 aa19.69■□□□□ 0.74
CCDC57-204ENST00000392345 USP47Q96K76 1375 aa19.69■□□□□ 0.74
CCDC57-204ENST00000392345 SLIT3O75094 1523 aa19.68■□□□□ 0.74
CCDC57-204ENST00000392345 GCP02774 474 aa19.67■□□□□ 0.74
CCDC57-204ENST00000392345 NLRP13Q86W25 1043 aa19.67■□□□□ 0.74
CCDC57-204ENST00000392345 CPDO75976 1380 aa19.67■□□□□ 0.74
CCDC57-204ENST00000392345 KTN1Q86UP2 1357 aaKnown RBP19.67■□□□□ 0.74
CCDC57-204ENST00000392345 MON2Q7Z3U7 1717 aa19.66■□□□□ 0.74
CCDC57-204ENST00000392345 NLRP6P59044 892 aa19.66■□□□□ 0.74
CCDC57-204ENST00000392345 SEPT12Q8IYM1 358 aa19.66■□□□□ 0.74
CCDC57-204ENST00000392345 LMO7Q8WWI1 1683 aa19.65■□□□□ 0.74
CCDC57-204ENST00000392345 TMC1Q8TDI8 760 aa19.65■□□□□ 0.74
CCDC57-204ENST00000392345 SLC12A5Q9H2X9 1139 aa19.65■□□□□ 0.74
CCDC57-204ENST00000392345 CAMTA1Q9Y6Y1 1673 aa19.65■□□□□ 0.74
CCDC57-204ENST00000392345 FAM98CQ17RN3 349 aaKnown RBP19.64■□□□□ 0.73
CCDC57-204ENST00000392345 CCER1Q8TC90 406 aaPredicted RBP19.64■□□□□ 0.73
CCDC57-204ENST00000392345 ZNF692Q9BU19 519 aaPredicted RBP19.64■□□□□ 0.73
CCDC57-204ENST00000392345 SPATA31A5Q5VU36 1347 aa19.64■□□□□ 0.73
CCDC57-204ENST00000392345 SPATA31A7Q8IWB4 1347 aa19.64■□□□□ 0.73
CCDC57-204ENST00000392345 BRWD3Q6RI45 1802 aa19.63■□□□□ 0.73
CCDC57-204ENST00000392345 STRN4Q9NRL3 753 aa19.63■□□□□ 0.73
CCDC57-204ENST00000392345 ZRANB1Q9UGI0 708 aa19.63■□□□□ 0.73
CCDC57-204ENST00000392345 A0A1W2PP64 1363 aa19.62■□□□□ 0.73
CCDC57-204ENST00000392345 ZBTB7CA1YPR0 619 aa19.62■□□□□ 0.73
CCDC57-204ENST00000392345 ONECUT3O60422 494 aaPredicted RBP19.62■□□□□ 0.73
CCDC57-204ENST00000392345 TTC21AQ8NDW8 1320 aa19.61■□□□□ 0.73
CCDC57-204ENST00000392345 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.61■□□□□ 0.732e-6■■■■□ 21.8
CCDC57-204ENST00000392345 TIMELESSQ9UNS1 1208 aa19.61■□□□□ 0.73
CCDC57-204ENST00000392345 SPATA31A1Q5TZJ5 1347 aa19.6■□□□□ 0.73
CCDC57-204ENST00000392345 THSD7AQ9UPZ6 1657 aa19.6■□□□□ 0.73
CCDC57-204ENST00000392345 A0A0G2JS52 829 aa19.6■□□□□ 0.73
CCDC57-204ENST00000392345 SOX12O15370 315 aa19.6■□□□□ 0.73
CCDC57-204ENST00000392345 MYT1Q01538 1121 aa19.6■□□□□ 0.73
CCDC57-204ENST00000392345 NFAT5O94916 1531 aa19.6■□□□□ 0.73
CCDC57-204ENST00000392345 LARP1Q6PKG0 1096 aaKnown RBP19.59■□□□□ 0.73
CCDC57-204ENST00000392345 NME9Q86XW9 330 aa19.59■□□□□ 0.73
CCDC57-204ENST00000392345 COL5A2P05997 1499 aaPredicted RBP19.59■□□□□ 0.73
CCDC57-204ENST00000392345 PUS7Q96PZ0 661 aaKnown RBP19.58■□□□□ 0.72
CCDC57-204ENST00000392345 EDC4Q6P2E9 1401 aaKnown RBP19.58■□□□□ 0.72
CCDC57-204ENST00000392345 HDGFL2Q7Z4V5 671 aaPredicted RBP19.57■□□□□ 0.72
CCDC57-204ENST00000392345 AATKQ6ZMQ8 1374 aa19.57■□□□□ 0.72
CCDC57-204ENST00000392345 EVA1CP58658 441 aa19.56■□□□□ 0.72
CCDC57-204ENST00000392345 USP35Q9P2H5 1018 aa19.56■□□□□ 0.72
CCDC57-204ENST00000392345 USP31Q70CQ4 1352 aa19.56■□□□□ 0.72
CCDC57-204ENST00000392345 COL18A1P39060 1754 aa19.55■□□□□ 0.72
CCDC57-204ENST00000392345 KRT27Q7Z3Y8 459 aa19.55■□□□□ 0.72
CCDC57-204ENST00000392345 TERF2IPQ9NYB0 399 aa19.55■□□□□ 0.72
CCDC57-204ENST00000392345 USP54Q70EL1 1684 aa19.55■□□□□ 0.72
CCDC57-204ENST00000392345 TMF1P82094 1093 aa19.54■□□□□ 0.72
CCDC57-204ENST00000392345 ARHGEF25Q86VW2 580 aa19.54■□□□□ 0.72
CCDC57-204ENST00000392345 AXIN2Q9Y2T1 843 aa19.54■□□□□ 0.72
CCDC57-204ENST00000392345 NINLQ9Y2I6 1382 aa19.54■□□□□ 0.72
CCDC57-204ENST00000392345 FAM182BQ5T319 152 aa19.53■□□□□ 0.72
CCDC57-204ENST00000392345 OVOS2A0A0J9YW53 1432 aa19.52■□□□□ 0.72
CCDC57-204ENST00000392345 OVOS2Q6IE36 1432 aa19.52■□□□□ 0.72
CCDC57-204ENST00000392345 KCNH5Q8NCM2 988 aa19.52■□□□□ 0.72
CCDC57-204ENST00000392345 ANKRD36BQ8N2N9 1353 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms