RNA–Protein interactions for RNA: ENST00000392270.3

RAET1E-203, retinoic acid early transcript 1E, humanhuman

TSL 2

Gene RAET1E, Length 743 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAET1E-203ENST00000392270 ROBO2Q9HCK4 1378 aa13.67□□□□□ -0.22
RAET1E-203ENST00000392270 PPLO60437 1756 aa13.66□□□□□ -0.22
RAET1E-203ENST00000392270 RBM6P78332 1123 aaKnown RBP13.66□□□□□ -0.22
RAET1E-203ENST00000392270 NGLY1Q96IV0 654 aa13.66□□□□□ -0.22
RAET1E-203ENST00000392270 PTCH1Q13635 1447 aa13.64□□□□□ -0.23
RAET1E-203ENST00000392270 MARF1Q9Y4F3 1742 aaKnown RBP13.63□□□□□ -0.23
RAET1E-203ENST00000392270 COL22A1Q8NFW1 1626 aaPredicted RBP13.63□□□□□ -0.23
RAET1E-203ENST00000392270 SOS2Q07890 1332 aaPredicted RBP13.63□□□□□ -0.23
RAET1E-203ENST00000392270 PLSCR2Q9NRY7 297 aa13.62□□□□□ -0.23
RAET1E-203ENST00000392270 USP21Q9UK80 565 aa13.62□□□□□ -0.23
RAET1E-203ENST00000392270 FBXO3Q9UK99 471 aa13.62□□□□□ -0.23
RAET1E-203ENST00000392270 SEC24BO95487 1268 aa13.6□□□□□ -0.23
RAET1E-203ENST00000392270 XPCQ01831 940 aaPredicted RBP13.6□□□□□ -0.23
RAET1E-203ENST00000392270 RAB3GAP2Q9H2M9 1393 aa13.59□□□□□ -0.23
RAET1E-203ENST00000392270 HRCP23327 699 aa13.59□□□□□ -0.23
RAET1E-203ENST00000392270 ATAD2Q6PL18 1390 aa13.58□□□□□ -0.23
RAET1E-203ENST00000392270 ATRNO75882 1429 aa13.58□□□□□ -0.24
RAET1E-203ENST00000392270 VGFO15240 615 aaPredicted RBP13.58□□□□□ -0.24
RAET1E-203ENST00000392270 TMEM106CQ9BVX2 250 aa13.58□□□□□ -0.24
RAET1E-203ENST00000392270 CDC42BPGQ6DT37 1551 aa13.58□□□□□ -0.24
RAET1E-203ENST00000392270 MYOM2P54296 1465 aa13.57□□□□□ -0.24
RAET1E-203ENST00000392270 PXDNQ92626 1479 aa13.57□□□□□ -0.24
RAET1E-203ENST00000392270 NUTM2FA1L443 756 aa13.57□□□□□ -0.24
RAET1E-203ENST00000392270 ESCO1Q5FWF5 840 aa13.57□□□□□ -0.24
RAET1E-203ENST00000392270 TRPC5Q9UL62 973 aaPredicted RBP13.57□□□□□ -0.24
RAET1E-203ENST00000392270 PRAG1Q86YV5 1406 aa13.56□□□□□ -0.24
RAET1E-203ENST00000392270 RGPD8O14715 1765 aaPredicted RBP13.56□□□□□ -0.24
RAET1E-203ENST00000392270 IFT172Q9UG01 1749 aa13.56□□□□□ -0.24
RAET1E-203ENST00000392270 FNBP4Q8N3X1 1017 aaPredicted RBP13.55□□□□□ -0.24
RAET1E-203ENST00000392270 PCGF6Q9BYE7 350 aa13.55□□□□□ -0.24
RAET1E-203ENST00000392270 STK26Q9P289 416 aa13.55□□□□□ -0.24
RAET1E-203ENST00000392270 ADGRF5Q8IZF2 1346 aa13.55□□□□□ -0.24
RAET1E-203ENST00000392270 BRWD3Q6RI45 1802 aa13.55□□□□□ -0.24
RAET1E-203ENST00000392270 BCL9LQ86UU0 1499 aa13.55□□□□□ -0.24
RAET1E-203ENST00000392270 FOXO3O43524 673 aa13.54□□□□□ -0.24
RAET1E-203ENST00000392270 WAPLQ7Z5K2 1190 aa13.54□□□□□ -0.24
RAET1E-203ENST00000392270 PLEKHH1Q9ULM0 1364 aa13.54□□□□□ -0.24
RAET1E-203ENST00000392270 FMN2Q9NZ56 1722 aa13.53□□□□□ -0.24
RAET1E-203ENST00000392270 PYGBP11216 843 aa13.53□□□□□ -0.24
RAET1E-203ENST00000392270 RPGRIP1LQ68CZ1 1315 aa13.53□□□□□ -0.24
RAET1E-203ENST00000392270 NPHP3Q7Z494 1330 aa13.53□□□□□ -0.24
RAET1E-203ENST00000392270 EP400Q96L91 3159 aa13.53□□□□□ -0.24
RAET1E-203ENST00000392270 KNDC1Q76NI1 1749 aa13.53□□□□□ -0.24
RAET1E-203ENST00000392270 IRX5P78411 483 aaPredicted RBP13.52□□□□□ -0.25
RAET1E-203ENST00000392270 RGL3Q3MIN7 710 aa13.52□□□□□ -0.25
RAET1E-203ENST00000392270 DCAF8Q5TAQ9 597 aa13.52□□□□□ -0.25
RAET1E-203ENST00000392270 PCDH10Q9P2E7 1040 aa13.52□□□□□ -0.25
RAET1E-203ENST00000392270 GLI3P10071 1580 aa13.52□□□□□ -0.25
RAET1E-203ENST00000392270 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.52□□□□□ -0.25
RAET1E-203ENST00000392270 TMEM132EQ6IEE7 984 aa13.51□□□□□ -0.25
RAET1E-203ENST00000392270 VASPP50552 380 aaPredicted RBP13.5□□□□□ -0.25
RAET1E-203ENST00000392270 FAM163AQ96GL9 167 aaPredicted RBP13.5□□□□□ -0.25
RAET1E-203ENST00000392270 GJD4Q96KN9 370 aaPredicted RBP13.49□□□□□ -0.25
RAET1E-203ENST00000392270 MPHOSPH9Q99550 1183 aa13.49□□□□□ -0.25
RAET1E-203ENST00000392270 KIF1AQ12756 1690 aa13.49□□□□□ -0.25
RAET1E-203ENST00000392270 USP32Q8NFA0 1604 aa13.49□□□□□ -0.25
RAET1E-203ENST00000392270 SRCAPQ6ZRS2 3230 aa13.49□□□□□ -0.25
RAET1E-203ENST00000392270 PLCH1Q4KWH8 1693 aa13.48□□□□□ -0.25
RAET1E-203ENST00000392270 RALGAPBQ86X10 1494 aa13.48□□□□□ -0.25
RAET1E-203ENST00000392270 TECPR2O15040 1411 aa13.47□□□□□ -0.25
RAET1E-203ENST00000392270 SPATA31E1Q6ZUB1 1445 aa13.47□□□□□ -0.25
RAET1E-203ENST00000392270 ABCA3Q99758 1704 aa13.47□□□□□ -0.25
RAET1E-203ENST00000392270 LRPPRCP42704 1394 aaKnown RBP13.47□□□□□ -0.25
RAET1E-203ENST00000392270 CCDC144AA2RUR9 1427 aa13.47□□□□□ -0.25
RAET1E-203ENST00000392270 SLIT2O94813 1529 aa13.46□□□□□ -0.25
RAET1E-203ENST00000392270 SPATA31A3Q5VYP0 1347 aa13.45□□□□□ -0.26
RAET1E-203ENST00000392270 UNC5CLQ8IV45 518 aa13.45□□□□□ -0.26
RAET1E-203ENST00000392270 CABLES1Q8TDN4 633 aa13.45□□□□□ -0.26
RAET1E-203ENST00000392270 PCDHB8Q9UN66 801 aa13.45□□□□□ -0.26
RAET1E-203ENST00000392270 PIK3C2GO75747 1445 aa13.45□□□□□ -0.26
RAET1E-203ENST00000392270 YTHDC2Q9H6S0 1430 aaKnown RBP13.45□□□□□ -0.26
RAET1E-203ENST00000392270 PLCG2P16885 1265 aa13.44□□□□□ -0.26
RAET1E-203ENST00000392270 KRT28Q7Z3Y7 464 aa13.44□□□□□ -0.26
RAET1E-203ENST00000392270 DEFB132Q7Z7B7 95 aa13.44□□□□□ -0.26
RAET1E-203ENST00000392270 ABCC11Q96J66 1382 aa13.44□□□□□ -0.26
RAET1E-203ENST00000392270 ANKRD30BQ9BXX2 1392 aa13.43□□□□□ -0.26
RAET1E-203ENST00000392270 SAFB2Q14151 953 aaKnown RBP eCLIP13.42□□□□□ -0.26
RAET1E-203ENST00000392270 NWD2Q9ULI1 1742 aa13.42□□□□□ -0.26
RAET1E-203ENST00000392270 BLMP54132 1417 aaPredicted RBP13.41□□□□□ -0.26
RAET1E-203ENST00000392270 TNS3Q68CZ2 1445 aa13.41□□□□□ -0.26
RAET1E-203ENST00000392270 HAP1P54257 671 aaPredicted RBP13.41□□□□□ -0.26
RAET1E-203ENST00000392270 CCDC125Q86Z20 511 aa13.41□□□□□ -0.26
RAET1E-203ENST00000392270 PHF8Q9UPP1 1060 aa13.41□□□□□ -0.26
RAET1E-203ENST00000392270 NRAPQ86VF7 1730 aa13.4□□□□□ -0.26
RAET1E-203ENST00000392270 GSE1Q14687 1217 aa13.4□□□□□ -0.26
RAET1E-203ENST00000392270 LMOD2Q6P5Q4 547 aa13.4□□□□□ -0.26
RAET1E-203ENST00000392270 SEPT12Q8IYM1 358 aa13.4□□□□□ -0.26
RAET1E-203ENST00000392270 OCEL1Q9H607 264 aa13.4□□□□□ -0.26
RAET1E-203ENST00000392270 CCDC9Q9Y3X0 531 aaKnown RBP13.4□□□□□ -0.26
RAET1E-203ENST00000392270 CFAP70Q5T0N1 1121 aa13.39□□□□□ -0.27
RAET1E-203ENST00000392270 TRPM3Q9HCF6 1732 aaPredicted RBP13.39□□□□□ -0.27
RAET1E-203ENST00000392270 NRXN1Q9ULB1 1477 aa13.38□□□□□ -0.27
RAET1E-203ENST00000392270 CHRM1P11229 460 aaPredicted RBP13.38□□□□□ -0.27
RAET1E-203ENST00000392270 SLAIN1Q8ND83 568 aa13.38□□□□□ -0.27
RAET1E-203ENST00000392270 VPS72Q15906 364 aa13.37□□□□□ -0.27
RAET1E-203ENST00000392270 KLHL34Q8N239 644 aa13.37□□□□□ -0.27
RAET1E-203ENST00000392270 PMFBP1Q8TBY8 1022 aa13.37□□□□□ -0.27
RAET1E-203ENST00000392270 PRAM1Q96QH2 718 aa13.37□□□□□ -0.27
RAET1E-203ENST00000392270 C14orf93Q9H972 538 aaKnown RBP13.37□□□□□ -0.27
RAET1E-203ENST00000392270 A0A0G2JS52 829 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms