RNA–Protein interactions for RNA: ENST00000392001.6

RAB17-202, Transcript of RAB17, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB17, Length 1,792 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB17-202ENST00000392001 KIF20BQ96Q89 1820 aa20.93■□□□□ 0.94
RAB17-202ENST00000392001 NGDNQ8NEJ9 315 aaKnown RBP20.92■□□□□ 0.94
RAB17-202ENST00000392001 PNISRQ8TF01 805 aaKnown RBP20.92■□□□□ 0.94
RAB17-202ENST00000392001 YTHDC1Q96MU7 727 aaKnown RBP20.92■□□□□ 0.94
RAB17-202ENST00000392001 NRKQ7Z2Y5 1582 aa20.92■□□□□ 0.94
RAB17-202ENST00000392001 TOM1O60784 492 aa20.92■□□□□ 0.94
RAB17-202ENST00000392001 PHF8Q9UPP1 1060 aa20.92■□□□□ 0.94
RAB17-202ENST00000392001 TTC21BQ7Z4L5 1316 aa20.91■□□□□ 0.94
RAB17-202ENST00000392001 ATF3P18847 181 aa20.9■□□□□ 0.94
RAB17-202ENST00000392001 ESCO1Q5FWF5 840 aa20.9■□□□□ 0.94
RAB17-202ENST00000392001 MSH6P52701 1360 aa20.89■□□□□ 0.94
RAB17-202ENST00000392001 C1orf167Q5SNV9 1468 aa20.89■□□□□ 0.94
RAB17-202ENST00000392001 CADPS2Q86UW7 1296 aa20.89■□□□□ 0.93
RAB17-202ENST00000392001 NME9Q86XW9 330 aa20.88■□□□□ 0.93
RAB17-202ENST00000392001 MST1RQ04912 1400 aa20.87■□□□□ 0.93
RAB17-202ENST00000392001 TTC21AQ8NDW8 1320 aa20.87■□□□□ 0.93
RAB17-202ENST00000392001 FAM9BQ8IZU0 186 aa20.87■□□□□ 0.93
RAB17-202ENST00000392001 ORAI2Q96SN7 254 aa20.87■□□□□ 0.93
RAB17-202ENST00000392001 SCAF1Q9H7N4 1312 aaKnown RBP20.86■□□□□ 0.93
RAB17-202ENST00000392001 TNNT2P45379 298 aaPredicted RBP20.86■□□□□ 0.93
RAB17-202ENST00000392001 ZRANB1Q9UGI0 708 aa20.84■□□□□ 0.93
RAB17-202ENST00000392001 COG3Q96JB2 828 aa20.83■□□□□ 0.93
RAB17-202ENST00000392001 MTHFSP49914 203 aa20.82■□□□□ 0.92
RAB17-202ENST00000392001 PIP4K2BP78356 416 aa20.82■□□□□ 0.92
RAB17-202ENST00000392001 KIF1AQ12756 1690 aa20.82■□□□□ 0.92
RAB17-202ENST00000392001 OVOS2A0A0J9YW53 1432 aa20.81■□□□□ 0.92
RAB17-202ENST00000392001 OVOS2Q6IE36 1432 aa20.81■□□□□ 0.92
RAB17-202ENST00000392001 USP31Q70CQ4 1352 aa20.81■□□□□ 0.92
RAB17-202ENST00000392001 PSME1Q06323 249 aa20.8■□□□□ 0.92
RAB17-202ENST00000392001 AATKQ6ZMQ8 1374 aa20.79■□□□□ 0.92
RAB17-202ENST00000392001 FOXO3O43524 673 aa20.79■□□□□ 0.92
RAB17-202ENST00000392001 INSRP06213 1382 aa20.78■□□□□ 0.92
RAB17-202ENST00000392001 PIK3C2AO00443 1686 aa20.78■□□□□ 0.92
RAB17-202ENST00000392001 SLAIN2Q9P270 581 aa20.76■□□□□ 0.91
RAB17-202ENST00000392001 POLKQ9UBT6 870 aa20.76■□□□□ 0.91
RAB17-202ENST00000392001 USP54Q70EL1 1684 aa20.76■□□□□ 0.91
RAB17-202ENST00000392001 CFAP53Q96M91 514 aa20.75■□□□□ 0.91
RAB17-202ENST00000392001 PNPLA6Q8IY17 1366 aa20.75■□□□□ 0.91
RAB17-202ENST00000392001 FBLN1P23142 703 aa20.74■□□□□ 0.91
RAB17-202ENST00000392001 ABTB2Q8N961 1025 aa20.74■□□□□ 0.91
RAB17-202ENST00000392001 MAP2P11137 1827 aaKnown RBP20.74■□□□□ 0.91
RAB17-202ENST00000392001 SMG6Q86US8 1419 aaKnown RBP20.74■□□□□ 0.91
RAB17-202ENST00000392001 PAK3O75914 559 aaPredicted RBP20.74■□□□□ 0.91
RAB17-202ENST00000392001 HNRNPUQ00839 825 aaKnown RBP eCLIP20.74■□□□□ 0.91
RAB17-202ENST00000392001 KRT28Q7Z3Y7 464 aa20.74■□□□□ 0.91
RAB17-202ENST00000392001 ADAMTS8Q9UP79 889 aa20.74■□□□□ 0.91
RAB17-202ENST00000392001 CENPBP07199 599 aaPredicted RBP20.73■□□□□ 0.91
RAB17-202ENST00000392001 NLRP6P59044 892 aa20.73■□□□□ 0.91
RAB17-202ENST00000392001 WDR43Q15061 677 aaKnown RBP eCLIP20.72■□□□□ 0.916e-7■□□□□ 9.8
RAB17-202ENST00000392001 TRPM3Q9HCF6 1732 aaPredicted RBP20.72■□□□□ 0.91
RAB17-202ENST00000392001 BRINP3Q76B58 766 aa20.72■□□□□ 0.91
RAB17-202ENST00000392001 MARF1Q9Y4F3 1742 aaKnown RBP20.71■□□□□ 0.91
RAB17-202ENST00000392001 NPHP3Q7Z494 1330 aa20.71■□□□□ 0.91
RAB17-202ENST00000392001 COL3A1P02461 1466 aaPredicted RBP20.71■□□□□ 0.91
RAB17-202ENST00000392001 SHPRHQ149N8 1683 aa20.71■□□□□ 0.91
RAB17-202ENST00000392001 BLMP54132 1417 aaPredicted RBP20.69■□□□□ 0.9
RAB17-202ENST00000392001 XPCQ01831 940 aaPredicted RBP20.69■□□□□ 0.9
RAB17-202ENST00000392001 EMILIN1Q9Y6C2 1016 aa20.69■□□□□ 0.9
RAB17-202ENST00000392001 RRS1Q15050 365 aaKnown RBP20.68■□□□□ 0.9
RAB17-202ENST00000392001 CDK12Q9NYV4 1490 aaPredicted RBP20.68■□□□□ 0.9
RAB17-202ENST00000392001 SBNO1A3KN83 1393 aa20.67■□□□□ 0.9
RAB17-202ENST00000392001 HSPA1LP34931 641 aa20.67■□□□□ 0.9
RAB17-202ENST00000392001 NUTM2GQ5VZR2 741 aa20.67■□□□□ 0.9
RAB17-202ENST00000392001 DDX17Q92841 729 aaKnown RBP20.67■□□□□ 0.9
RAB17-202ENST00000392001 PXDNQ92626 1479 aa20.66■□□□□ 0.9
RAB17-202ENST00000392001 ALS2Q96Q42 1657 aa20.65■□□□□ 0.9
RAB17-202ENST00000392001 PPM1GO15355 546 aaPredicted RBP20.65■□□□□ 0.9
RAB17-202ENST00000392001 ZBED9Q6R2W3 1325 aa20.65■□□□□ 0.9
RAB17-202ENST00000392001 DIAPH1O60610 1272 aaKnown RBP20.64■□□□□ 0.9
RAB17-202ENST00000392001 NUDCQ9Y266 331 aa20.64■□□□□ 0.89
RAB17-202ENST00000392001 MAP3K19Q56UN5 1328 aa20.63■□□□□ 0.89
RAB17-202ENST00000392001 USP19O94966 1318 aa20.62■□□□□ 0.89
RAB17-202ENST00000392001 SOS2Q07890 1332 aaPredicted RBP20.62■□□□□ 0.89
RAB17-202ENST00000392001 KCNH5Q8NCM2 988 aa20.62■□□□□ 0.89
RAB17-202ENST00000392001 PEAK1Q9H792 1746 aa20.61■□□□□ 0.89
RAB17-202ENST00000392001 SOX12O15370 315 aa20.61■□□□□ 0.89
RAB17-202ENST00000392001 KIF24Q5T7B8 1368 aa20.61■□□□□ 0.89
RAB17-202ENST00000392001 SLIT3O75094 1523 aa20.61■□□□□ 0.89
RAB17-202ENST00000392001 SPATA31A3Q5VYP0 1347 aa20.6■□□□□ 0.89
RAB17-202ENST00000392001 IL13P35225 146 aa20.6■□□□□ 0.89
RAB17-202ENST00000392001 NFAT5O94916 1531 aa20.6■□□□□ 0.89
RAB17-202ENST00000392001 TNS3Q68CZ2 1445 aa20.6■□□□□ 0.89
RAB17-202ENST00000392001 U2AF1L5P0DN76 240 aaPredicted RBP20.59■□□□□ 0.89
RAB17-202ENST00000392001 U2AF1Q01081 240 aaKnown RBP eCLIP20.59■□□□□ 0.891e-14■■■□□ 18.9
RAB17-202ENST00000392001 LMOD2Q6P5Q4 547 aa20.59■□□□□ 0.89
RAB17-202ENST00000392001 FLT4P35916 1363 aa20.58■□□□□ 0.89
RAB17-202ENST00000392001 GCP02774 474 aa20.58■□□□□ 0.89
RAB17-202ENST00000392001 NHSL1Q5SYE7 1610 aa20.58■□□□□ 0.88
RAB17-202ENST00000392001 ARHGEF10O15013 1369 aa20.57■□□□□ 0.88
RAB17-202ENST00000392001 U2SURPO15042 1029 aaKnown RBP20.57■□□□□ 0.88
RAB17-202ENST00000392001 HSP90AB2PQ58FF8 381 aa20.57■□□□□ 0.88
RAB17-202ENST00000392001 AMPHP49418 695 aa20.56■□□□□ 0.88
RAB17-202ENST00000392001 CCDC146Q8IYE0 955 aa20.56■□□□□ 0.88
RAB17-202ENST00000392001 RUNDC1Q96C34 613 aa20.55■□□□□ 0.88
RAB17-202ENST00000392001 MED1Q15648 1581 aaPredicted RBP20.55■□□□□ 0.88
RAB17-202ENST00000392001 EIF4A2Q14240 407 aaKnown RBP20.54■□□□□ 0.88
RAB17-202ENST00000392001 RTL1A6NKG5 1358 aa20.54■□□□□ 0.88
RAB17-202ENST00000392001 PHRF1Q9P1Y6 1649 aaKnown RBP20.54■□□□□ 0.88
RAB17-202ENST00000392001 HOXC9P31274 260 aa20.54■□□□□ 0.88
RAB17-202ENST00000392001 ROBO1Q9Y6N7 1651 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms