RNA–Protein interactions for RNA: ENST00000391855.2

GGPS1-203, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2 BASIC

Gene GGPS1, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-203ENST00000391855 LMOD2Q6P5Q4 547 aa17.94■□□□□ 0.46
GGPS1-203ENST00000391855 CCER1Q8TC90 406 aaPredicted RBP17.94■□□□□ 0.46
GGPS1-203ENST00000391855 SLC24A1O60721 1099 aa17.93■□□□□ 0.46
GGPS1-203ENST00000391855 FNBP4Q8N3X1 1017 aaPredicted RBP17.93■□□□□ 0.46
GGPS1-203ENST00000391855 MAPK8IP2Q13387 824 aaPredicted RBP17.91■□□□□ 0.46
GGPS1-203ENST00000391855 CDK12Q9NYV4 1490 aaPredicted RBP17.91■□□□□ 0.46
GGPS1-203ENST00000391855 PAK3O75914 559 aaPredicted RBP17.9■□□□□ 0.46
GGPS1-203ENST00000391855 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.9■□□□□ 0.46
GGPS1-203ENST00000391855 USP21Q9UK80 565 aa17.89■□□□□ 0.46
GGPS1-203ENST00000391855 RXRBP28702 533 aa17.89■□□□□ 0.45
GGPS1-203ENST00000391855 CRYBG1Q9Y4K1 1723 aa17.88■□□□□ 0.45
GGPS1-203ENST00000391855 SLIT2O94813 1529 aa17.88■□□□□ 0.45
GGPS1-203ENST00000391855 PUS7Q96PZ0 661 aaKnown RBP17.88■□□□□ 0.45
GGPS1-203ENST00000391855 CABP1Q9NZU7 370 aa17.88■□□□□ 0.45
GGPS1-203ENST00000391855 TRPC5Q9UL62 973 aaPredicted RBP17.88■□□□□ 0.45
GGPS1-203ENST00000391855 USP6P35125 1406 aa17.88■□□□□ 0.45
GGPS1-203ENST00000391855 RBM6P78332 1123 aaKnown RBP17.87■□□□□ 0.45
GGPS1-203ENST00000391855 QTRT2Q9H974 415 aaKnown RBP17.87■□□□□ 0.45
GGPS1-203ENST00000391855 USP47Q96K76 1375 aa17.86■□□□□ 0.45
GGPS1-203ENST00000391855 NWD2Q9ULI1 1742 aa17.86■□□□□ 0.45
GGPS1-203ENST00000391855 ATRNO75882 1429 aa17.86■□□□□ 0.45
GGPS1-203ENST00000391855 CABLES1Q8TDN4 633 aa17.86■□□□□ 0.45
GGPS1-203ENST00000391855 BCL9LQ86UU0 1499 aa17.86■□□□□ 0.45
GGPS1-203ENST00000391855 PHRF1Q9P1Y6 1649 aaKnown RBP17.85■□□□□ 0.45
GGPS1-203ENST00000391855 ZNF692Q9BU19 519 aaPredicted RBP17.85■□□□□ 0.45
GGPS1-203ENST00000391855 AKAP12Q02952 1782 aa17.84■□□□□ 0.45
GGPS1-203ENST00000391855 ST20-MTHFSA0A0A6YYL1 179 aa17.84■□□□□ 0.45
GGPS1-203ENST00000391855 PLCH1Q4KWH8 1693 aa17.84■□□□□ 0.45
GGPS1-203ENST00000391855 COL14A1Q05707 1796 aaKnown RBP17.83■□□□□ 0.45
GGPS1-203ENST00000391855 NINLQ9Y2I6 1382 aa17.83■□□□□ 0.44
GGPS1-203ENST00000391855 UNC5CLQ8IV45 518 aa17.82■□□□□ 0.44
GGPS1-203ENST00000391855 ABTB2Q8N961 1025 aa17.82■□□□□ 0.44
GGPS1-203ENST00000391855 TESK2Q96S53 571 aa17.82■□□□□ 0.44
GGPS1-203ENST00000391855 CPSF1Q10570 1443 aaKnown RBP17.82■□□□□ 0.44
GGPS1-203ENST00000391855 SSH2Q76I76 1423 aa17.82■□□□□ 0.44
GGPS1-203ENST00000391855 PLEKHG5O94827 1062 aa17.81■□□□□ 0.44
GGPS1-203ENST00000391855 NLRP13Q86W25 1043 aa17.81■□□□□ 0.44
GGPS1-203ENST00000391855 USP19O94966 1318 aa17.81■□□□□ 0.44
GGPS1-203ENST00000391855 MON2Q7Z3U7 1717 aa17.81■□□□□ 0.44
GGPS1-203ENST00000391855 TTC21AQ8NDW8 1320 aa17.8■□□□□ 0.44
GGPS1-203ENST00000391855 NRKQ7Z2Y5 1582 aa17.8■□□□□ 0.44
GGPS1-203ENST00000391855 RGS12O14924 1447 aa17.79■□□□□ 0.44
GGPS1-203ENST00000391855 KTN1Q86UP2 1357 aaKnown RBP17.79■□□□□ 0.44
GGPS1-203ENST00000391855 TMF1P82094 1093 aa17.79■□□□□ 0.44
GGPS1-203ENST00000391855 PRDM11Q9NQV5 511 aa17.79■□□□□ 0.44
GGPS1-203ENST00000391855 CDCA8Q53HL2 280 aa17.78■□□□□ 0.44
GGPS1-203ENST00000391855 NRAPQ86VF7 1730 aa17.78■□□□□ 0.44
GGPS1-203ENST00000391855 CPDO75976 1380 aa17.77■□□□□ 0.44
GGPS1-203ENST00000391855 TTC21BQ7Z4L5 1316 aa17.77■□□□□ 0.44
GGPS1-203ENST00000391855 FAM83GA6ND36 823 aa17.77■□□□□ 0.44
GGPS1-203ENST00000391855 VPS72Q15906 364 aa17.77■□□□□ 0.44
GGPS1-203ENST00000391855 HDGFL2Q7Z4V5 671 aaPredicted RBP17.77■□□□□ 0.44
GGPS1-203ENST00000391855 GJD4Q96KN9 370 aaPredicted RBP17.77■□□□□ 0.44
GGPS1-203ENST00000391855 TERF2IPQ9NYB0 399 aa17.77■□□□□ 0.44
GGPS1-203ENST00000391855 PIK3C2AO00443 1686 aa17.77■□□□□ 0.44
GGPS1-203ENST00000391855 SLIT3O75094 1523 aa17.77■□□□□ 0.43
GGPS1-203ENST00000391855 KIAA0232Q92628 1395 aa17.76■□□□□ 0.43
GGPS1-203ENST00000391855 NUTM2GQ5VZR2 741 aa17.76■□□□□ 0.43
GGPS1-203ENST00000391855 TMC1Q8TDI8 760 aa17.76■□□□□ 0.43
GGPS1-203ENST00000391855 CD163L1Q9NR16 1453 aa17.76■□□□□ 0.43
GGPS1-203ENST00000391855 NLRP6P59044 892 aa17.75■□□□□ 0.43
GGPS1-203ENST00000391855 GLI3P10071 1580 aa17.75■□□□□ 0.43
GGPS1-203ENST00000391855 BTG4Q9NY30 223 aa17.74■□□□□ 0.43
GGPS1-203ENST00000391855 EDC4Q6P2E9 1401 aaKnown RBP17.74■□□□□ 0.43
GGPS1-203ENST00000391855 USP54Q70EL1 1684 aa17.73■□□□□ 0.43
GGPS1-203ENST00000391855 GCP02774 474 aa17.72■□□□□ 0.43
GGPS1-203ENST00000391855 SLC12A5Q9H2X9 1139 aa17.72■□□□□ 0.43
GGPS1-203ENST00000391855 A0A1W2PP64 1363 aa17.72■□□□□ 0.43
GGPS1-203ENST00000391855 KCNH5Q8NCM2 988 aa17.72■□□□□ 0.43
GGPS1-203ENST00000391855 USP31Q70CQ4 1352 aa17.71■□□□□ 0.43
GGPS1-203ENST00000391855 ZC3H6P61129 1189 aaKnown RBP17.71■□□□□ 0.43
GGPS1-203ENST00000391855 LMO7Q8WWI1 1683 aa17.7■□□□□ 0.42
GGPS1-203ENST00000391855 EIF4G2P78344 907 aaKnown RBP eCLIP17.7■□□□□ 0.42
GGPS1-203ENST00000391855 CCDC9Q9Y3X0 531 aaKnown RBP17.7■□□□□ 0.42
GGPS1-203ENST00000391855 ANKRD36BQ8N2N9 1353 aa17.7■□□□□ 0.42
GGPS1-203ENST00000391855 CHRNA2Q15822 529 aa17.68■□□□□ 0.42
GGPS1-203ENST00000391855 AATKQ6ZMQ8 1374 aa17.67■□□□□ 0.42
GGPS1-203ENST00000391855 ABCC6O95255 1503 aa17.67■□□□□ 0.42
GGPS1-203ENST00000391855 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.66■□□□□ 0.42
GGPS1-203ENST00000391855 CAMTA1Q9Y6Y1 1673 aa17.66■□□□□ 0.42
GGPS1-203ENST00000391855 SPATA31A5Q5VU36 1347 aa17.66■□□□□ 0.42
GGPS1-203ENST00000391855 SPATA31A7Q8IWB4 1347 aa17.66■□□□□ 0.42
GGPS1-203ENST00000391855 NFAT5O94916 1531 aa17.65■□□□□ 0.42
GGPS1-203ENST00000391855 ONECUT3O60422 494 aaPredicted RBP17.65■□□□□ 0.42
GGPS1-203ENST00000391855 OVOS2A0A0J9YW53 1432 aa17.64■□□□□ 0.42
GGPS1-203ENST00000391855 NCBP3Q53F19 620 aaKnown RBP17.64■□□□□ 0.42
GGPS1-203ENST00000391855 OVOS2Q6IE36 1432 aa17.64■□□□□ 0.42
GGPS1-203ENST00000391855 COL5A2P05997 1499 aaPredicted RBP17.64■□□□□ 0.41
GGPS1-203ENST00000391855 EVA1CP58658 441 aa17.64■□□□□ 0.41
GGPS1-203ENST00000391855 NME9Q86XW9 330 aa17.64■□□□□ 0.41
GGPS1-203ENST00000391855 CNKSR2Q8WXI2 1034 aa17.64■□□□□ 0.41
GGPS1-203ENST00000391855 STRN4Q9NRL3 753 aa17.64■□□□□ 0.41
GGPS1-203ENST00000391855 ARHGEF25Q86VW2 580 aa17.63■□□□□ 0.41
GGPS1-203ENST00000391855 SEPT12Q8IYM1 358 aa17.63■□□□□ 0.41
GGPS1-203ENST00000391855 UPF1Q92900 1129 aaKnown RBP eCLIP17.63■□□□□ 0.41
GGPS1-203ENST00000391855 MYOM1P52179 1685 aa17.63■□□□□ 0.41
GGPS1-203ENST00000391855 SPATA31A1Q5TZJ5 1347 aa17.62■□□□□ 0.41
GGPS1-203ENST00000391855 HSPA5P11021 654 aaKnown RBP17.62■□□□□ 0.41
GGPS1-203ENST00000391855 COL18A1P39060 1754 aa17.62■□□□□ 0.41
GGPS1-203ENST00000391855 THSD7AQ9UPZ6 1657 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms