RNA–Protein interactions for RNA: ENST00000391303.1

RNU1-56P-201, Transcript of RNA, U1 small nuclear 56, pseudogene, humanhuman

BASIC

Gene RNU1-56P, Length 164 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-56P-201ENST00000391303 BTG4Q9NY30 223 aa10.08□□□□□ -0.8
RNU1-56P-201ENST00000391303 CPDO75976 1380 aa10.08□□□□□ -0.8
RNU1-56P-201ENST00000391303 BLMP54132 1417 aaPredicted RBP10.07□□□□□ -0.8
RNU1-56P-201ENST00000391303 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.07□□□□□ -0.8
RNU1-56P-201ENST00000391303 ROCK2O75116 1388 aaKnown RBP10.07□□□□□ -0.8
RNU1-56P-201ENST00000391303 SBNO2Q9Y2G9 1366 aa10.07□□□□□ -0.8
RNU1-56P-201ENST00000391303 CCDC9Q9Y3X0 531 aaKnown RBP10.07□□□□□ -0.8
RNU1-56P-201ENST00000391303 USP19O94966 1318 aa10.07□□□□□ -0.8
RNU1-56P-201ENST00000391303 SPATA31A5Q5VU36 1347 aa10.07□□□□□ -0.8
RNU1-56P-201ENST00000391303 SPATA31A7Q8IWB4 1347 aa10.07□□□□□ -0.8
RNU1-56P-201ENST00000391303 KRT27Q7Z3Y8 459 aa10.06□□□□□ -0.8
RNU1-56P-201ENST00000391303 ABTB2Q8N961 1025 aa10.06□□□□□ -0.8
RNU1-56P-201ENST00000391303 SIN3AQ96ST3 1273 aa10.06□□□□□ -0.8
RNU1-56P-201ENST00000391303 PPIP5K1Q6PFW1 1433 aa10.06□□□□□ -0.8
RNU1-56P-201ENST00000391303 ARHGEF28Q8N1W1 1705 aaKnown RBP10.05□□□□□ -0.8
RNU1-56P-201ENST00000391303 KIAA0232Q92628 1395 aa10.05□□□□□ -0.8
RNU1-56P-201ENST00000391303 SF3B2Q13435 895 aaKnown RBP10.05□□□□□ -0.8
RNU1-56P-201ENST00000391303 NEUROD1Q13562 356 aa10.05□□□□□ -0.8
RNU1-56P-201ENST00000391303 PUS7Q96PZ0 661 aaKnown RBP10.05□□□□□ -0.8
RNU1-56P-201ENST00000391303 ZRANB1Q9UGI0 708 aa10.05□□□□□ -0.8
RNU1-56P-201ENST00000391303 GLI3P10071 1580 aa10.05□□□□□ -0.8
RNU1-56P-201ENST00000391303 TRPM3Q9HCF6 1732 aaPredicted RBP10.04□□□□□ -0.8
RNU1-56P-201ENST00000391303 C11orf95C9JLR9 678 aaPredicted RBP10.04□□□□□ -0.8
RNU1-56P-201ENST00000391303 GCP02774 474 aa10.04□□□□□ -0.8
RNU1-56P-201ENST00000391303 TRIM26Q12899 539 aaPredicted RBP10.04□□□□□ -0.8
RNU1-56P-201ENST00000391303 BARGINQ6ZT62 677 aa10.04□□□□□ -0.8
RNU1-56P-201ENST00000391303 CABP2Q9NPB3 220 aa10.04□□□□□ -0.8
RNU1-56P-201ENST00000391303 CABP1Q9NZU7 370 aa10.04□□□□□ -0.8
RNU1-56P-201ENST00000391303 THRAP3Q9Y2W1 955 aaKnown RBP10.04□□□□□ -0.8
RNU1-56P-201ENST00000391303 NWD2Q9ULI1 1742 aa10.04□□□□□ -0.8
RNU1-56P-201ENST00000391303 ALS2Q96Q42 1657 aa10.03□□□□□ -0.8
RNU1-56P-201ENST00000391303 USP6P35125 1406 aa10.03□□□□□ -0.8
RNU1-56P-201ENST00000391303 SPATA31A1Q5TZJ5 1347 aa10.03□□□□□ -0.8
RNU1-56P-201ENST00000391303 TTC21AQ8NDW8 1320 aa10.03□□□□□ -0.8
RNU1-56P-201ENST00000391303 TONSLQ96HA7 1378 aa10.02□□□□□ -0.8
RNU1-56P-201ENST00000391303 MARF1Q9Y4F3 1742 aaKnown RBP10.02□□□□□ -0.8
RNU1-56P-201ENST00000391303 SSH2Q76I76 1423 aa10.02□□□□□ -0.81
RNU1-56P-201ENST00000391303 COL14A1Q05707 1796 aaKnown RBP10.02□□□□□ -0.81
RNU1-56P-201ENST00000391303 FAM98CQ17RN3 349 aaKnown RBP10.02□□□□□ -0.81
RNU1-56P-201ENST00000391303 KCNH5Q8NCM2 988 aa10.02□□□□□ -0.81
RNU1-56P-201ENST00000391303 ITSN1Q15811 1721 aa10.02□□□□□ -0.81
RNU1-56P-201ENST00000391303 AATKQ6ZMQ8 1374 aa10.01□□□□□ -0.81
RNU1-56P-201ENST00000391303 A0A0G2JS52 829 aa10.01□□□□□ -0.81
RNU1-56P-201ENST00000391303 PLEKHG5O94827 1062 aa10.01□□□□□ -0.81
RNU1-56P-201ENST00000391303 BAG6P46379 1132 aa10.01□□□□□ -0.81
RNU1-56P-201ENST00000391303 EVA1CP58658 441 aa10.01□□□□□ -0.81
RNU1-56P-201ENST00000391303 NLRP6P59044 892 aa10.01□□□□□ -0.81
RNU1-56P-201ENST00000391303 ZC3H6P61129 1189 aaKnown RBP10.01□□□□□ -0.81
RNU1-56P-201ENST00000391303 MYT1Q01538 1121 aa10.01□□□□□ -0.81
RNU1-56P-201ENST00000391303 CARD11Q9BXL7 1154 aa10.01□□□□□ -0.81
RNU1-56P-201ENST00000391303 FAM196AQ6ZSG2 479 aa10□□□□□ -0.81
RNU1-56P-201ENST00000391303 TCP11L2Q8N4U5 519 aa10□□□□□ -0.81
RNU1-56P-201ENST00000391303 TIMELESSQ9UNS1 1208 aa10□□□□□ -0.81
RNU1-56P-201ENST00000391303 TOPAZ1Q8N9V7 1692 aa9.99□□□□□ -0.81
RNU1-56P-201ENST00000391303 CPSF1Q10570 1443 aaKnown RBP9.99□□□□□ -0.81
RNU1-56P-201ENST00000391303 CHRNA2Q15822 529 aa9.99□□□□□ -0.81
RNU1-56P-201ENST00000391303 NUTM2GQ5VZR2 741 aa9.99□□□□□ -0.81
RNU1-56P-201ENST00000391303 TTC21BQ7Z4L5 1316 aa9.99□□□□□ -0.81
RNU1-56P-201ENST00000391303 CDCA7Q9BWT1 371 aaPredicted RBP9.98□□□□□ -0.81
RNU1-56P-201ENST00000391303 STRN4Q9NRL3 753 aa9.98□□□□□ -0.81
RNU1-56P-201ENST00000391303 CLSPNQ9HAW4 1339 aa9.98□□□□□ -0.81
RNU1-56P-201ENST00000391303 ABCA3Q99758 1704 aa9.98□□□□□ -0.81
RNU1-56P-201ENST00000391303 PARD3Q8TEW0 1356 aa9.98□□□□□ -0.81
RNU1-56P-201ENST00000391303 NINLQ9Y2I6 1382 aa9.98□□□□□ -0.81
RNU1-56P-201ENST00000391303 DISP2A7MBM2 1401 aa9.98□□□□□ -0.81
RNU1-56P-201ENST00000391303 TRPM1Q7Z4N2 1603 aa9.97□□□□□ -0.81
RNU1-56P-201ENST00000391303 PLCH1Q4KWH8 1693 aa9.97□□□□□ -0.81
RNU1-56P-201ENST00000391303 RGPD8O14715 1765 aaPredicted RBP9.97□□□□□ -0.81
RNU1-56P-201ENST00000391303 ARHGEF25Q86VW2 580 aa9.97□□□□□ -0.81
RNU1-56P-201ENST00000391303 TERF2IPQ9NYB0 399 aa9.97□□□□□ -0.81
RNU1-56P-201ENST00000391303 USP31Q70CQ4 1352 aa9.97□□□□□ -0.81
RNU1-56P-201ENST00000391303 SLIT3O75094 1523 aa9.97□□□□□ -0.81
RNU1-56P-201ENST00000391303 PDE3BQ13370 1112 aa9.96□□□□□ -0.82
RNU1-56P-201ENST00000391303 LARP1Q6PKG0 1096 aaKnown RBP9.96□□□□□ -0.82
RNU1-56P-201ENST00000391303 HDGFL2Q7Z4V5 671 aaPredicted RBP9.96□□□□□ -0.82
RNU1-56P-201ENST00000391303 KTN1Q86UP2 1357 aaKnown RBP9.96□□□□□ -0.82
RNU1-56P-201ENST00000391303 CRB1P82279 1406 aa9.96□□□□□ -0.82
RNU1-56P-201ENST00000391303 NRKQ7Z2Y5 1582 aa9.96□□□□□ -0.82
RNU1-56P-201ENST00000391303 NRAPQ86VF7 1730 aa9.96□□□□□ -0.82
RNU1-56P-201ENST00000391303 DEFB132Q7Z7B7 95 aa9.95□□□□□ -0.82
RNU1-56P-201ENST00000391303 COL5A2P05997 1499 aaPredicted RBP9.95□□□□□ -0.82
RNU1-56P-201ENST00000391303 CAMTA1Q9Y6Y1 1673 aa9.95□□□□□ -0.82
RNU1-56P-201ENST00000391303 CRYBG1Q9Y4K1 1723 aa9.95□□□□□ -0.82
RNU1-56P-201ENST00000391303 THSD7AQ9UPZ6 1657 aa9.94□□□□□ -0.82
RNU1-56P-201ENST00000391303 WDR17Q8IZU2 1322 aa9.94□□□□□ -0.82
RNU1-56P-201ENST00000391303 QRICH2Q9H0J4 1663 aa9.93□□□□□ -0.82
RNU1-56P-201ENST00000391303 ABCC6O95255 1503 aa9.93□□□□□ -0.82
RNU1-56P-201ENST00000391303 EDC4Q6P2E9 1401 aaKnown RBP9.93□□□□□ -0.82
RNU1-56P-201ENST00000391303 CDCA8Q53HL2 280 aa9.93□□□□□ -0.82
RNU1-56P-201ENST00000391303 TESK2Q96S53 571 aa9.93□□□□□ -0.82
RNU1-56P-201ENST00000391303 CARD10Q9BWT7 1032 aa9.93□□□□□ -0.82
RNU1-56P-201ENST00000391303 USP35Q9P2H5 1018 aa9.93□□□□□ -0.82
RNU1-56P-201ENST00000391303 PHRF1Q9P1Y6 1649 aaKnown RBP9.93□□□□□ -0.82
RNU1-56P-201ENST00000391303 BCL9O00512 1426 aa9.92□□□□□ -0.82
RNU1-56P-201ENST00000391303 CCDC7Q96M83 1385 aa9.92□□□□□ -0.82
RNU1-56P-201ENST00000391303 TOM1L2Q6ZVM7 507 aa9.92□□□□□ -0.82
RNU1-56P-201ENST00000391303 LMO7Q8WWI1 1683 aa9.92□□□□□ -0.82
RNU1-56P-201ENST00000391303 DDB1Q16531 1140 aa9.91□□□□□ -0.82
RNU1-56P-201ENST00000391303 TMC1Q8TDI8 760 aa9.91□□□□□ -0.82
RNU1-56P-201ENST00000391303 ST20-MTHFSA0A0A6YYL1 179 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms