RNA–Protein interactions for RNA: ENST00000390882.1

RNU6-440P-201, Transcript of RNA, U6 small nuclear 440, pseudogene, humanhuman

BASIC

Gene RNU6-440P, Length 105 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-440P-201ENST00000390882 ADH1CP00326 375 aa4.22□□□□□ -1.73
RNU6-440P-201ENST00000390882 WDR4P57081 412 aaKnown RBP4.22□□□□□ -1.73
RNU6-440P-201ENST00000390882 NNTQ13423 1086 aa4.22□□□□□ -1.73
RNU6-440P-201ENST00000390882 GRIPAP1Q4V328 841 aa4.22□□□□□ -1.73
RNU6-440P-201ENST00000390882 OATP04181 439 aa4.21□□□□□ -1.74
RNU6-440P-201ENST00000390882 E2F4Q16254 413 aa4.21□□□□□ -1.74
RNU6-440P-201ENST00000390882 C6orf118Q5T5N4 469 aa4.21□□□□□ -1.74
RNU6-440P-201ENST00000390882 PODNQ7Z5L7 613 aa4.21□□□□□ -1.74
RNU6-440P-201ENST00000390882 USB1Q9BQ65 265 aaKnown RBP4.21□□□□□ -1.74
RNU6-440P-201ENST00000390882 ADAMTS2O95450 1211 aa4.2□□□□□ -1.74
RNU6-440P-201ENST00000390882 CELA2BP08218 269 aaPredicted RBP4.2□□□□□ -1.74
RNU6-440P-201ENST00000390882 GCGRP47871 477 aa4.2□□□□□ -1.74
RNU6-440P-201ENST00000390882 VSIG10Q8N0Z9 540 aa4.2□□□□□ -1.74
RNU6-440P-201ENST00000390882 MPNDQ8N594 471 aa4.2□□□□□ -1.74
RNU6-440P-201ENST00000390882 PXYLP1Q8TE99 480 aa4.2□□□□□ -1.74
RNU6-440P-201ENST00000390882 KLF16Q9BXK1 252 aaPredicted RBP4.2□□□□□ -1.74
RNU6-440P-201ENST00000390882 SOS2Q07890 1332 aaPredicted RBP4.2□□□□□ -1.74
RNU6-440P-201ENST00000390882 UPP2O95045 317 aa4.19□□□□□ -1.74
RNU6-440P-201ENST00000390882 BMP2P12643 396 aa4.19□□□□□ -1.74
RNU6-440P-201ENST00000390882 PTSQ03393 145 aa4.19□□□□□ -1.74
RNU6-440P-201ENST00000390882 ZNF800Q2TB10 664 aaPredicted RBP eCLIP4.19□□□□□ -1.74
RNU6-440P-201ENST00000390882 TSHZ2Q9NRE2 1034 aa4.19□□□□□ -1.74
RNU6-440P-201ENST00000390882 DNMT3LQ9UJW3 386 aa4.19□□□□□ -1.74
RNU6-440P-201ENST00000390882 SH3BP2P78314 561 aa4.18□□□□□ -1.74
RNU6-440P-201ENST00000390882 SRSF11Q05519 484 aaKnown RBP4.18□□□□□ -1.74
RNU6-440P-201ENST00000390882 ZMYM1Q5SVZ6 1142 aa4.18□□□□□ -1.74
RNU6-440P-201ENST00000390882 SV2AQ7L0J3 742 aa4.18□□□□□ -1.74
RNU6-440P-201ENST00000390882 DAXXQ9UER7 740 aaPredicted RBP4.18□□□□□ -1.74
RNU6-440P-201ENST00000390882 DDX11L8A8MPP1 907 aa4.17□□□□□ -1.74
RNU6-440P-201ENST00000390882 VWA5B2Q8N398 1253 aa4.17□□□□□ -1.74
RNU6-440P-201ENST00000390882 CCDC155Q8N6L0 562 aa4.17□□□□□ -1.74
RNU6-440P-201ENST00000390882 TLL2Q9Y6L7 1015 aa4.17□□□□□ -1.74
RNU6-440P-201ENST00000390882 KRBA1A5PL33 1030 aa4.16□□□□□ -1.74
RNU6-440P-201ENST00000390882 COBLO75128 1261 aa4.16□□□□□ -1.74
RNU6-440P-201ENST00000390882 VARSP26640 1264 aaKnown RBP4.16□□□□□ -1.74
RNU6-440P-201ENST00000390882 PTCRAQ6ISU1 281 aaPredicted RBP4.16□□□□□ -1.74
RNU6-440P-201ENST00000390882 ZIC2O95409 532 aaPredicted RBP4.15□□□□□ -1.75
RNU6-440P-201ENST00000390882 LINC00528Q8N1L1 170 aa4.15□□□□□ -1.75
RNU6-440P-201ENST00000390882 NEDD1Q8NHV4 660 aa4.15□□□□□ -1.75
RNU6-440P-201ENST00000390882 CDC14CA4D256 554 aa4.14□□□□□ -1.75
RNU6-440P-201ENST00000390882 ITGA6P23229 1130 aa4.14□□□□□ -1.75
RNU6-440P-201ENST00000390882 ITGB7P26010 798 aa4.14□□□□□ -1.75
RNU6-440P-201ENST00000390882 METTL3Q86U44 580 aaKnown RBP4.14□□□□□ -1.75
RNU6-440P-201ENST00000390882 ALYREFQ86V81 257 aaKnown RBP4.14□□□□□ -1.75
RNU6-440P-201ENST00000390882 SULF1Q8IWU6 871 aa4.14□□□□□ -1.75
RNU6-440P-201ENST00000390882 KRTAP4-9Q9BYQ8 210 aa4.14□□□□□ -1.75
RNU6-440P-201ENST00000390882 ZFAND3Q9H8U3 227 aa4.14□□□□□ -1.75
RNU6-440P-201ENST00000390882 KDM2AQ9Y2K7 1162 aa4.14□□□□□ -1.75
RNU6-440P-201ENST00000390882 SCO2A0A1W2PP80 73 aa4.13□□□□□ -1.75
RNU6-440P-201ENST00000390882 SLC35F4A4IF30 521 aa4.13□□□□□ -1.75
RNU6-440P-201ENST00000390882 SH3RF1Q7Z6J0 888 aa4.13□□□□□ -1.75
RNU6-440P-201ENST00000390882 ITPKCQ96DU7 683 aa4.13□□□□□ -1.75
RNU6-440P-201ENST00000390882 KRTAP4-2Q9BYR5 136 aa4.13□□□□□ -1.75
RNU6-440P-201ENST00000390882 TTLL8A6PVC2 850 aa4.12□□□□□ -1.75
RNU6-440P-201ENST00000390882 JUNDP17535 347 aa4.12□□□□□ -1.75
RNU6-440P-201ENST00000390882 NBPF11Q86T75 865 aa4.12□□□□□ -1.75
RNU6-440P-201ENST00000390882 NUDT12Q9BQG2 462 aa4.12□□□□□ -1.75
RNU6-440P-201ENST00000390882 SEMA6BQ9H3T3 888 aa4.12□□□□□ -1.75
RNU6-440P-201ENST00000390882 FIGNL2A6NMB9 653 aa4.11□□□□□ -1.75
RNU6-440P-201ENST00000390882 BCRP11274 1271 aa4.11□□□□□ -1.75
RNU6-440P-201ENST00000390882 MEIOBQ8N635 442 aa4.11□□□□□ -1.75
RNU6-440P-201ENST00000390882 TSEN34Q9BSV6 310 aaKnown RBP4.11□□□□□ -1.75
RNU6-440P-201ENST00000390882 ZFP64Q9NPA5 681 aa4.11□□□□□ -1.75
RNU6-440P-201ENST00000390882 ARID1BQ8NFD5 2236 aaPredicted RBP4.1□□□□□ -1.75
RNU6-440P-201ENST00000390882 NUTM2FA1L443 756 aa4.1□□□□□ -1.75
RNU6-440P-201ENST00000390882 SPTLC1O15269 473 aa4.1□□□□□ -1.75
RNU6-440P-201ENST00000390882 FCHSD2O94868 740 aa4.1□□□□□ -1.75
RNU6-440P-201ENST00000390882 WDR70Q9NW82 654 aa4.1□□□□□ -1.75
RNU6-440P-201ENST00000390882 NR5A1Q13285 461 aa4.09□□□□□ -1.75
RNU6-440P-201ENST00000390882 ARTNQ5T4W7 220 aa4.09□□□□□ -1.75
RNU6-440P-201ENST00000390882 BAP1Q92560 729 aa4.09□□□□□ -1.75
RNU6-440P-201ENST00000390882 CDK15Q96Q40 435 aa4.09□□□□□ -1.75
RNU6-440P-201ENST00000390882 LRRC4BQ9NT99 713 aa4.09□□□□□ -1.75
RNU6-440P-201ENST00000390882 YBX3P16989 372 aaKnown RBP eCLIP4.08□□□□□ -1.76
RNU6-440P-201ENST00000390882 LINC01559Q495D7 138 aa4.08□□□□□ -1.76
RNU6-440P-201ENST00000390882 FAM174AQ8TBP5 190 aa4.08□□□□□ -1.76
RNU6-440P-201ENST00000390882 GAS6Q14393 721 aa4.07□□□□□ -1.76
RNU6-440P-201ENST00000390882 ZNF511Q8NB15 262 aa4.07□□□□□ -1.76
RNU6-440P-201ENST00000390882 UNC93B1Q9H1C4 597 aa4.07□□□□□ -1.76
RNU6-440P-201ENST00000390882 C1QTNF9BB2RNN3 333 aa4.06□□□□□ -1.76
RNU6-440P-201ENST00000390882 NR3C2P08235 984 aa4.06□□□□□ -1.76
RNU6-440P-201ENST00000390882 MLLT3P42568 568 aaPredicted RBP4.06□□□□□ -1.76
RNU6-440P-201ENST00000390882 ARID5BQ14865 1188 aa4.06□□□□□ -1.76
RNU6-440P-201ENST00000390882 MBIPQ9NS73 344 aa4.06□□□□□ -1.76
RNU6-440P-201ENST00000390882 MKL2Q9ULH7 1088 aa4.06□□□□□ -1.76
RNU6-440P-201ENST00000390882 IGF1RP08069 1367 aa4.05□□□□□ -1.76
RNU6-440P-201ENST00000390882 CCNYL3P0C7X3 344 aa4.05□□□□□ -1.76
RNU6-440P-201ENST00000390882 COL8A1P27658 744 aa4.05□□□□□ -1.76
RNU6-440P-201ENST00000390882 KDM4AO75164 1064 aa4.04□□□□□ -1.76
RNU6-440P-201ENST00000390882 SNRPNP63162 240 aaKnown RBP4.04□□□□□ -1.76
RNU6-440P-201ENST00000390882 DOC2BQ14184 412 aa4.04□□□□□ -1.76
RNU6-440P-201ENST00000390882 FOXD4L6Q3SYB3 417 aaPredicted RBP4.04□□□□□ -1.76
RNU6-440P-201ENST00000390882 FOXD4L3Q6VB84 417 aaPredicted RBP4.04□□□□□ -1.76
RNU6-440P-201ENST00000390882 BCANQ96GW7 911 aa4.04□□□□□ -1.76
RNU6-440P-201ENST00000390882 EVA1BQ9NVM1 165 aa4.04□□□□□ -1.76
RNU6-440P-201ENST00000390882 GRM5P41594 1212 aa4.03□□□□□ -1.76
RNU6-440P-201ENST00000390882 TXKP42681 527 aa4.03□□□□□ -1.76
RNU6-440P-201ENST00000390882 USP46P62068 366 aa4.03□□□□□ -1.76
RNU6-440P-201ENST00000390882 CD163Q86VB7 1156 aa4.03□□□□□ -1.76
RNU6-440P-201ENST00000390882 P3H3Q8IVL6 736 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms