RNA–Protein interactions for RNA: ENST00000390466.1

TRAV39-201, Transcript of T cell receptor alpha variable 39, humanhuman

APPRIS P1 BASIC

Gene TRAV39, Length 331 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV39-201ENST00000390466 FANCAO15360 1455 aa4.4□□□□□ -1.71
TRAV39-201ENST00000390466 PREX1Q8TCU6 1659 aa4.4□□□□□ -1.71
TRAV39-201ENST00000390466 CFAP65Q6ZU64 1925 aaKnown RBP4.4□□□□□ -1.71
TRAV39-201ENST00000390466 ARHGAP5Q13017 1502 aa4.4□□□□□ -1.71
TRAV39-201ENST00000390466 KIDINS220Q9ULH0 1771 aa4.4□□□□□ -1.71
TRAV39-201ENST00000390466 GLI2P10070 1586 aa4.4□□□□□ -1.71
TRAV39-201ENST00000390466 FRMPD1Q5SYB0 1578 aa4.4□□□□□ -1.71
TRAV39-201ENST00000390466 CARMIL2Q6F5E8 1435 aa4.39□□□□□ -1.71
TRAV39-201ENST00000390466 TRAPPC8Q9Y2L5 1435 aa4.39□□□□□ -1.71
TRAV39-201ENST00000390466 SETD1AO15047 1707 aaKnown RBP4.39□□□□□ -1.71
TRAV39-201ENST00000390466 OFD1O75665 1012 aa4.39□□□□□ -1.71
TRAV39-201ENST00000390466 HSP90AA1P07900 732 aaKnown RBP4.39□□□□□ -1.71
TRAV39-201ENST00000390466 RBM25P49756 843 aaKnown RBP4.39□□□□□ -1.71
TRAV39-201ENST00000390466 RAB3GAP1Q15042 981 aa4.39□□□□□ -1.71
TRAV39-201ENST00000390466 CCDC146Q8IYE0 955 aa4.39□□□□□ -1.71
TRAV39-201ENST00000390466 PDLIM2Q96JY6 352 aa4.39□□□□□ -1.71
TRAV39-201ENST00000390466 CARD14Q9BXL6 1004 aa4.39□□□□□ -1.71
TRAV39-201ENST00000390466 EIF2AK3Q9NZJ5 1116 aaKnown RBP4.39□□□□□ -1.71
TRAV39-201ENST00000390466 DAXXQ9UER7 740 aaPredicted RBP4.39□□□□□ -1.71
TRAV39-201ENST00000390466 CIZ1Q9ULV3 898 aaPredicted RBP4.39□□□□□ -1.71
TRAV39-201ENST00000390466 COG6Q9Y2V7 657 aa4.39□□□□□ -1.71
TRAV39-201ENST00000390466 LMTK2Q8IWU2 1503 aa4.39□□□□□ -1.71
TRAV39-201ENST00000390466 MAP2P11137 1827 aaKnown RBP4.39□□□□□ -1.71
TRAV39-201ENST00000390466 PIK3R4Q99570 1358 aa4.39□□□□□ -1.71
TRAV39-201ENST00000390466 PLCH2O75038 1416 aa4.38□□□□□ -1.71
TRAV39-201ENST00000390466 LRRC7Q96NW7 1537 aa4.38□□□□□ -1.71
TRAV39-201ENST00000390466 DDX11L8A8MPP1 907 aa4.38□□□□□ -1.71
TRAV39-201ENST00000390466 HAX1O00165 279 aa4.38□□□□□ -1.71
TRAV39-201ENST00000390466 CD2BP2O95400 341 aaKnown RBP4.38□□□□□ -1.71
TRAV39-201ENST00000390466 CYP2E1P05181 493 aaPredicted RBP4.38□□□□□ -1.71
TRAV39-201ENST00000390466 HNRNPMP52272 730 aaKnown RBP eCLIP4.38□□□□□ -1.71
TRAV39-201ENST00000390466 HDAC1Q13547 482 aaPredicted RBP4.38□□□□□ -1.71
TRAV39-201ENST00000390466 WDR43Q15061 677 aaKnown RBP eCLIP4.38□□□□□ -1.71
TRAV39-201ENST00000390466 CCDC27Q2M243 656 aa4.38□□□□□ -1.71
TRAV39-201ENST00000390466 GLIPR1L2Q4G1C9 344 aa4.38□□□□□ -1.71
TRAV39-201ENST00000390466 PMFBP1Q8TBY8 1022 aa4.38□□□□□ -1.71
TRAV39-201ENST00000390466 PDCL3Q9H2J4 239 aa4.38□□□□□ -1.71
TRAV39-201ENST00000390466 ZNF219Q9P2Y4 722 aaPredicted RBP4.38□□□□□ -1.71
TRAV39-201ENST00000390466 HECW2Q9P2P5 1572 aa4.38□□□□□ -1.71
TRAV39-201ENST00000390466 CACNA1FO60840 1977 aa4.38□□□□□ -1.71
TRAV39-201ENST00000390466 CRYBG1Q9Y4K1 1723 aa4.38□□□□□ -1.71
TRAV39-201ENST00000390466 PPIP5K1Q6PFW1 1433 aa4.38□□□□□ -1.71
TRAV39-201ENST00000390466 CHD2O14647 1828 aaKnown RBP4.37□□□□□ -1.71
TRAV39-201ENST00000390466 ATP7AQ04656 1500 aa4.37□□□□□ -1.71
TRAV39-201ENST00000390466 ZNF500O60304 480 aaPredicted RBP4.37□□□□□ -1.71
TRAV39-201ENST00000390466 ILDR1Q86SU0 546 aaPredicted RBP4.37□□□□□ -1.71
TRAV39-201ENST00000390466 TNPO1Q92973 898 aaKnown RBP4.37□□□□□ -1.71
TRAV39-201ENST00000390466 C22orf23Q9BZE7 217 aa4.37□□□□□ -1.71
TRAV39-201ENST00000390466 ZNF777Q9ULD5 760 aaPredicted RBP4.37□□□□□ -1.71
TRAV39-201ENST00000390466 PTCH1Q13635 1447 aa4.37□□□□□ -1.71
TRAV39-201ENST00000390466 UHRF1BP1LA0JNW5 1464 aa4.37□□□□□ -1.71
TRAV39-201ENST00000390466 CD163L1Q9NR16 1453 aa4.37□□□□□ -1.71
TRAV39-201ENST00000390466 MYH15Q9Y2K3 1946 aa4.36□□□□□ -1.71
TRAV39-201ENST00000390466 ITSN1Q15811 1721 aa4.36□□□□□ -1.71
TRAV39-201ENST00000390466 ZNF445P59923 1031 aa4.36□□□□□ -1.71
TRAV39-201ENST00000390466 CCDC173Q0VFZ6 552 aa4.36□□□□□ -1.71
TRAV39-201ENST00000390466 MVPQ14764 893 aaKnown RBP4.36□□□□□ -1.71
TRAV39-201ENST00000390466 RSPH4AQ5TD94 716 aa4.36□□□□□ -1.71
TRAV39-201ENST00000390466 POTEGQ6S5H5 508 aa4.36□□□□□ -1.71
TRAV39-201ENST00000390466 KIAA1211Q6ZU35 1233 aa4.36□□□□□ -1.71
TRAV39-201ENST00000390466 ZSCAN30Q86W11 494 aa4.36□□□□□ -1.71
TRAV39-201ENST00000390466 WDR63Q8IWG1 891 aa4.36□□□□□ -1.71
TRAV39-201ENST00000390466 GZF1Q9H116 711 aaPredicted RBP4.36□□□□□ -1.71
TRAV39-201ENST00000390466 MYH16Q9H6N6 1097 aa4.36□□□□□ -1.71
TRAV39-201ENST00000390466 KNSTRNQ9Y448 316 aa4.36□□□□□ -1.71
TRAV39-201ENST00000390466 ABCC11Q96J66 1382 aa4.36□□□□□ -1.71
TRAV39-201ENST00000390466 NSD3Q9BZ95 1437 aa4.36□□□□□ -1.71
TRAV39-201ENST00000390466 NRKQ7Z2Y5 1582 aa4.36□□□□□ -1.71
TRAV39-201ENST00000390466 RGL3Q3MIN7 710 aa4.35□□□□□ -1.71
TRAV39-201ENST00000390466 HS1BP3Q53T59 392 aa4.35□□□□□ -1.71
TRAV39-201ENST00000390466 SAMD1Q6SPF0 538 aaPredicted RBP4.35□□□□□ -1.71
TRAV39-201ENST00000390466 SMAP1Q8IYB5 467 aaPredicted RBP4.35□□□□□ -1.71
TRAV39-201ENST00000390466 STAC3Q96MF2 364 aa4.35□□□□□ -1.71
TRAV39-201ENST00000390466 ABCC3O15438 1527 aa4.35□□□□□ -1.71
TRAV39-201ENST00000390466 NEXMIFQ5QGS0 1516 aa4.35□□□□□ -1.71
TRAV39-201ENST00000390466 DIP2BQ9P265 1576 aa4.35□□□□□ -1.71
TRAV39-201ENST00000390466 MON2Q7Z3U7 1717 aa4.35□□□□□ -1.71
TRAV39-201ENST00000390466 KDM4FA0A1W2PPD8 638 aa4.34□□□□□ -1.71
TRAV39-201ENST00000390466 HSP90AB1P08238 724 aaKnown RBP4.34□□□□□ -1.71
TRAV39-201ENST00000390466 CT47B1P0C2W7 299 aaPredicted RBP4.34□□□□□ -1.71
TRAV39-201ENST00000390466 TRIM27P14373 513 aa4.34□□□□□ -1.71
TRAV39-201ENST00000390466 SSFA2P28290 1259 aa4.34□□□□□ -1.71
TRAV39-201ENST00000390466 KLHL40Q2TBA0 621 aa4.34□□□□□ -1.71
TRAV39-201ENST00000390466 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.34□□□□□ -1.71
TRAV39-201ENST00000390466 GAS2L2Q8NHY3 880 aa4.34□□□□□ -1.71
TRAV39-201ENST00000390466 ZBTB40Q9NUA8 1239 aa4.34□□□□□ -1.71
TRAV39-201ENST00000390466 NSD2O96028 1365 aa4.34□□□□□ -1.71
TRAV39-201ENST00000390466 ATP10DQ9P241 1426 aa4.34□□□□□ -1.71
TRAV39-201ENST00000390466 FAM208AQ9UK61 1670 aaKnown RBP4.34□□□□□ -1.71
TRAV39-201ENST00000390466 RGPD1P0DJD0 1748 aa4.34□□□□□ -1.71
TRAV39-201ENST00000390466 XRN1Q8IZH2 1706 aaKnown RBP4.34□□□□□ -1.71
TRAV39-201ENST00000390466 AKAP12Q02952 1782 aa4.34□□□□□ -1.71
TRAV39-201ENST00000390466 ARHGEF40Q8TER5 1519 aa4.33□□□□□ -1.72
TRAV39-201ENST00000390466 PLEKHD1A6NEE1 506 aa4.33□□□□□ -1.72
TRAV39-201ENST00000390466 BAG4O95429 457 aaKnown RBP4.33□□□□□ -1.72
TRAV39-201ENST00000390466 TSPY4P0CV99 314 aa4.33□□□□□ -1.72
TRAV39-201ENST00000390466 TSPY10P0CW01 314 aa4.33□□□□□ -1.72
TRAV39-201ENST00000390466 MFAP1P55081 439 aaKnown RBP4.33□□□□□ -1.72
TRAV39-201ENST00000390466 BRPF1P55201 1214 aaPredicted RBP4.33□□□□□ -1.72
TRAV39-201ENST00000390466 NUCB1Q02818 461 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms