RNA–Protein interactions for RNA: ENST00000390426.2

TRAV4-201, Transcript of T cell receptor alpha variable 4, humanhuman

APPRIS P1 BASIC

Gene TRAV4, Length 395 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4-201ENST00000390426 NWD2Q9ULI1 1742 aa15.47■□□□□ 0.07
TRAV4-201ENST00000390426 ACEP12821 1306 aa15.46■□□□□ 0.07
TRAV4-201ENST00000390426 FAM98CQ17RN3 349 aaKnown RBP15.46■□□□□ 0.07
TRAV4-201ENST00000390426 NBPF8Q3BBV2 869 aa15.46■□□□□ 0.07
TRAV4-201ENST00000390426 L3MBTL2Q969R5 705 aa15.46■□□□□ 0.07
TRAV4-201ENST00000390426 PRDM11Q9NQV5 511 aa15.46■□□□□ 0.07
TRAV4-201ENST00000390426 CCDC61Q9Y6R9 512 aa15.46■□□□□ 0.07
TRAV4-201ENST00000390426 KRT27Q7Z3Y8 459 aa15.45■□□□□ 0.06
TRAV4-201ENST00000390426 SIN3AQ96ST3 1273 aa15.45■□□□□ 0.06
TRAV4-201ENST00000390426 ZRANB1Q9UGI0 708 aa15.45■□□□□ 0.06
TRAV4-201ENST00000390426 KIAA1210Q9ULL0 1709 aa15.45■□□□□ 0.06
TRAV4-201ENST00000390426 CENPJQ9HC77 1338 aaPredicted RBP15.44■□□□□ 0.06
TRAV4-201ENST00000390426 PLEKHG3A1L390 1219 aa15.44■□□□□ 0.06
TRAV4-201ENST00000390426 ZC3H6P61129 1189 aaKnown RBP15.44■□□□□ 0.06
TRAV4-201ENST00000390426 SRPK2P78362 688 aaKnown RBP15.44■□□□□ 0.06
TRAV4-201ENST00000390426 CHRNA2Q15822 529 aa15.44■□□□□ 0.06
TRAV4-201ENST00000390426 BRWD3Q6RI45 1802 aa15.44■□□□□ 0.06
TRAV4-201ENST00000390426 BLMP54132 1417 aaPredicted RBP15.43■□□□□ 0.06
TRAV4-201ENST00000390426 NEUROD1Q13562 356 aa15.43■□□□□ 0.06
TRAV4-201ENST00000390426 DEFB132Q7Z7B7 95 aa15.43■□□□□ 0.06
TRAV4-201ENST00000390426 CABP2Q9NPB3 220 aa15.43■□□□□ 0.06
TRAV4-201ENST00000390426 POLR3AO14802 1390 aaPredicted RBP15.43■□□□□ 0.06
TRAV4-201ENST00000390426 ITSN1Q15811 1721 aa15.43■□□□□ 0.06
TRAV4-201ENST00000390426 COL14A1Q05707 1796 aaKnown RBP15.42■□□□□ 0.06
TRAV4-201ENST00000390426 KIAA0232Q92628 1395 aa15.42■□□□□ 0.06
TRAV4-201ENST00000390426 SF3B2Q13435 895 aaKnown RBP15.42■□□□□ 0.06
TRAV4-201ENST00000390426 SPATA31A5Q5VU36 1347 aa15.42■□□□□ 0.06
TRAV4-201ENST00000390426 SPATA31A7Q8IWB4 1347 aa15.42■□□□□ 0.06
TRAV4-201ENST00000390426 NRAPQ86VF7 1730 aa15.41■□□□□ 0.06
TRAV4-201ENST00000390426 ABTB2Q8N961 1025 aa15.4■□□□□ 0.06
TRAV4-201ENST00000390426 STRN4Q9NRL3 753 aa15.4■□□□□ 0.06
TRAV4-201ENST00000390426 CRYBG1Q9Y4K1 1723 aa15.4■□□□□ 0.06
TRAV4-201ENST00000390426 FAM182BQ5T319 152 aa15.39■□□□□ 0.05
TRAV4-201ENST00000390426 PPIP5K1Q6PFW1 1433 aa15.39■□□□□ 0.05
TRAV4-201ENST00000390426 TOPAZ1Q8N9V7 1692 aa15.38■□□□□ 0.05
TRAV4-201ENST00000390426 CABP1Q9NZU7 370 aa15.38■□□□□ 0.05
TRAV4-201ENST00000390426 EVA1CP58658 441 aa15.37■□□□□ 0.05
TRAV4-201ENST00000390426 NLRP13Q86W25 1043 aa15.36■□□□□ 0.05
TRAV4-201ENST00000390426 SPATA31A1Q5TZJ5 1347 aa15.36■□□□□ 0.05
TRAV4-201ENST00000390426 PHRF1Q9P1Y6 1649 aaKnown RBP15.35■□□□□ 0.05
TRAV4-201ENST00000390426 USP35Q9P2H5 1018 aa15.35■□□□□ 0.05
TRAV4-201ENST00000390426 USP19O94966 1318 aa15.35■□□□□ 0.05
TRAV4-201ENST00000390426 GCP02774 474 aa15.34■□□□□ 0.05
TRAV4-201ENST00000390426 BAG6P46379 1132 aa15.34■□□□□ 0.05
TRAV4-201ENST00000390426 EVC2Q86UK5 1308 aa15.34■□□□□ 0.05
TRAV4-201ENST00000390426 QRICH2Q9H0J4 1663 aa15.34■□□□□ 0.05
TRAV4-201ENST00000390426 ROCK2O75116 1388 aaKnown RBP15.34■□□□□ 0.05
TRAV4-201ENST00000390426 ZBTB7CA1YPR0 619 aa15.33■□□□□ 0.04
TRAV4-201ENST00000390426 LARP1Q6PKG0 1096 aaKnown RBP15.33■□□□□ 0.04
TRAV4-201ENST00000390426 EP400Q96L91 3159 aa15.33■□□□□ 0.04
TRAV4-201ENST00000390426 NLRP6P59044 892 aa15.32■□□□□ 0.04
TRAV4-201ENST00000390426 CPDO75976 1380 aa15.32■□□□□ 0.04
TRAV4-201ENST00000390426 SSH2Q76I76 1423 aa15.32■□□□□ 0.04
TRAV4-201ENST00000390426 TRPM1Q7Z4N2 1603 aa15.32■□□□□ 0.04
TRAV4-201ENST00000390426 BRD4O60885 1362 aaPredicted RBP15.31■□□□□ 0.04
TRAV4-201ENST00000390426 USP6P35125 1406 aa15.31■□□□□ 0.04
TRAV4-201ENST00000390426 NRKQ7Z2Y5 1582 aa15.31■□□□□ 0.04
TRAV4-201ENST00000390426 THSD7AQ9UPZ6 1657 aa15.31■□□□□ 0.04
TRAV4-201ENST00000390426 CAMTA1Q9Y6Y1 1673 aa15.31■□□□□ 0.04
TRAV4-201ENST00000390426 EN1Q05925 392 aaPredicted RBP15.3■□□□□ 0.04
TRAV4-201ENST00000390426 BARGINQ6ZT62 677 aa15.29■□□□□ 0.04
TRAV4-201ENST00000390426 TCP11L2Q8N4U5 519 aa15.29■□□□□ 0.04
TRAV4-201ENST00000390426 PSDA5PKW4 1024 aaPredicted RBP15.28■□□□□ 0.04
TRAV4-201ENST00000390426 TRIM37O94972 964 aa15.28■□□□□ 0.04
TRAV4-201ENST00000390426 PDE3BQ13370 1112 aa15.28■□□□□ 0.04
TRAV4-201ENST00000390426 FAM196AQ6ZSG2 479 aa15.27■□□□□ 0.04
TRAV4-201ENST00000390426 LMO7Q8WWI1 1683 aa15.26■□□□□ 0.03
TRAV4-201ENST00000390426 TTC21BQ7Z4L5 1316 aa15.26■□□□□ 0.03
TRAV4-201ENST00000390426 ZNF692Q9BU19 519 aaPredicted RBP15.26■□□□□ 0.03
TRAV4-201ENST00000390426 EZH2Q15910 746 aaKnown RBP15.25■□□□□ 0.03
TRAV4-201ENST00000390426 CARD11Q9BXL7 1154 aa15.25■□□□□ 0.03
TRAV4-201ENST00000390426 SOX12O15370 315 aa15.24■□□□□ 0.03
TRAV4-201ENST00000390426 APBA3O96018 575 aa15.24■□□□□ 0.03
TRAV4-201ENST00000390426 THRAP3Q9Y2W1 955 aaKnown RBP15.24■□□□□ 0.03
TRAV4-201ENST00000390426 COL5A2P05997 1499 aaPredicted RBP15.24■□□□□ 0.03
TRAV4-201ENST00000390426 AATKQ6ZMQ8 1374 aa15.24■□□□□ 0.03
TRAV4-201ENST00000390426 RGPD1P0DJD0 1748 aa15.23■□□□□ 0.03
TRAV4-201ENST00000390426 SLIT3O75094 1523 aa15.23■□□□□ 0.03
TRAV4-201ENST00000390426 TOM1L2Q6ZVM7 507 aa15.22■□□□□ 0.03
TRAV4-201ENST00000390426 CAMKK2Q96RR4 588 aa15.22■□□□□ 0.03
TRAV4-201ENST00000390426 AXIN2Q9Y2T1 843 aa15.22■□□□□ 0.03
TRAV4-201ENST00000390426 DISP2A7MBM2 1401 aa15.22■□□□□ 0.03
TRAV4-201ENST00000390426 CRB1P82279 1406 aa15.22■□□□□ 0.03
TRAV4-201ENST00000390426 KTN1Q86UP2 1357 aaKnown RBP15.22■□□□□ 0.03
TRAV4-201ENST00000390426 TONSLQ96HA7 1378 aa15.22■□□□□ 0.03
TRAV4-201ENST00000390426 TTC21AQ8NDW8 1320 aa15.21■□□□□ 0.03
TRAV4-201ENST00000390426 R3HDM1Q15032 1099 aaKnown RBP15.21■□□□□ 0.03
TRAV4-201ENST00000390426 ARHGEF25Q86VW2 580 aa15.21■□□□□ 0.03
TRAV4-201ENST00000390426 KCNH5Q8NCM2 988 aa15.21■□□□□ 0.03
TRAV4-201ENST00000390426 PIK3C2AO00443 1686 aa15.21■□□□□ 0.03
TRAV4-201ENST00000390426 CPSF1Q10570 1443 aaKnown RBP15.2■□□□□ 0.02
TRAV4-201ENST00000390426 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.2■□□□□ 0.02
TRAV4-201ENST00000390426 TMC1Q8TDI8 760 aa15.2■□□□□ 0.02
TRAV4-201ENST00000390426 TNS1Q9HBL0 1735 aaKnown RBP15.2■□□□□ 0.02
TRAV4-201ENST00000390426 WDR17Q8IZU2 1322 aa15.18■□□□□ 0.02
TRAV4-201ENST00000390426 CSB-PGBD3P0DP91 1061 aa15.18■□□□□ 0.02
TRAV4-201ENST00000390426 SBNO2Q9Y2G9 1366 aa15.18■□□□□ 0.02
TRAV4-201ENST00000390426 AKAP12Q02952 1782 aa15.17■□□□□ 0.02
TRAV4-201ENST00000390426 DDB1Q16531 1140 aa15.17■□□□□ 0.02
TRAV4-201ENST00000390426 SLC12A5Q9H2X9 1139 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms