RNA–Protein interactions for RNA: ENST00000390425.2

TRAV3-201, Transcript of T cell receptor alpha variable 3 (gene/pseudogene), humanhuman

APPRIS P1 BASIC

Gene TRAV3, Length 519 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV3-201ENST00000390425 SEPT12Q8IYM1 358 aa16.11■□□□□ 0.17
TRAV3-201ENST00000390425 BLMP54132 1417 aaPredicted RBP16.11■□□□□ 0.17
TRAV3-201ENST00000390425 NRKQ7Z2Y5 1582 aa16.1■□□□□ 0.17
TRAV3-201ENST00000390425 ONECUT3O60422 494 aaPredicted RBP16.1■□□□□ 0.17
TRAV3-201ENST00000390425 NGDNQ8NEJ9 315 aaKnown RBP16.1■□□□□ 0.17
TRAV3-201ENST00000390425 NUDT16Q96DE0 195 aaKnown RBP16.1■□□□□ 0.17
TRAV3-201ENST00000390425 NBPF1Q3BBV0 1214 aa16.09■□□□□ 0.17
TRAV3-201ENST00000390425 CCDC125Q86Z20 511 aa16.09■□□□□ 0.17
TRAV3-201ENST00000390425 POLR3AO14802 1390 aaPredicted RBP16.09■□□□□ 0.17
TRAV3-201ENST00000390425 TRPM1Q7Z4N2 1603 aa16.08■□□□□ 0.17
TRAV3-201ENST00000390425 BTG4Q9NY30 223 aa16.08■□□□□ 0.16
TRAV3-201ENST00000390425 CCDC9Q9Y3X0 531 aaKnown RBP16.08■□□□□ 0.16
TRAV3-201ENST00000390425 CDK19Q9BWU1 502 aa16.07■□□□□ 0.16
TRAV3-201ENST00000390425 RGPD1P0DJD0 1748 aa16.06■□□□□ 0.16
TRAV3-201ENST00000390425 TNS1Q9HBL0 1735 aaKnown RBP16.06■□□□□ 0.16
TRAV3-201ENST00000390425 LMO7Q8WWI1 1683 aa16.05■□□□□ 0.16
TRAV3-201ENST00000390425 KIAA0232Q92628 1395 aa16.05■□□□□ 0.16
TRAV3-201ENST00000390425 PAK3O75914 559 aaPredicted RBP16.05■□□□□ 0.16
TRAV3-201ENST00000390425 ACEP12821 1306 aa16.04■□□□□ 0.16
TRAV3-201ENST00000390425 SPATA31A5Q5VU36 1347 aa16.04■□□□□ 0.16
TRAV3-201ENST00000390425 SPATA31A7Q8IWB4 1347 aa16.04■□□□□ 0.16
TRAV3-201ENST00000390425 FAM98CQ17RN3 349 aaKnown RBP16.04■□□□□ 0.16
TRAV3-201ENST00000390425 KRT27Q7Z3Y8 459 aa16.04■□□□□ 0.16
TRAV3-201ENST00000390425 DEFB132Q7Z7B7 95 aa16.04■□□□□ 0.16
TRAV3-201ENST00000390425 CCDC61Q9Y6R9 512 aa16.03■□□□□ 0.16
TRAV3-201ENST00000390425 PLEKHG3A1L390 1219 aa16.02■□□□□ 0.16
TRAV3-201ENST00000390425 PRDM11Q9NQV5 511 aa16.02■□□□□ 0.16
TRAV3-201ENST00000390425 ZRANB1Q9UGI0 708 aa16.02■□□□□ 0.16
TRAV3-201ENST00000390425 PPIP5K1Q6PFW1 1433 aa16.02■□□□□ 0.15
TRAV3-201ENST00000390425 CENPJQ9HC77 1338 aaPredicted RBP16.01■□□□□ 0.15
TRAV3-201ENST00000390425 NBPF8Q3BBV2 869 aa16.01■□□□□ 0.15
TRAV3-201ENST00000390425 NUTM2GQ5VZR2 741 aa16.01■□□□□ 0.15
TRAV3-201ENST00000390425 PIK3C2AO00443 1686 aa16■□□□□ 0.15
TRAV3-201ENST00000390425 CAMTA1Q9Y6Y1 1673 aa16■□□□□ 0.15
TRAV3-201ENST00000390425 CHRNA2Q15822 529 aa16■□□□□ 0.15
TRAV3-201ENST00000390425 AKAP12Q02952 1782 aa16■□□□□ 0.15
TRAV3-201ENST00000390425 USP19O94966 1318 aa15.99■□□□□ 0.15
TRAV3-201ENST00000390425 A0A0G2JS52 829 aa15.99■□□□□ 0.15
TRAV3-201ENST00000390425 MYT1Q01538 1121 aa15.99■□□□□ 0.15
TRAV3-201ENST00000390425 L3MBTL2Q969R5 705 aa15.99■□□□□ 0.15
TRAV3-201ENST00000390425 SPATA31A1Q5TZJ5 1347 aa15.98■□□□□ 0.15
TRAV3-201ENST00000390425 SSH2Q76I76 1423 aa15.98■□□□□ 0.15
TRAV3-201ENST00000390425 CABP2Q9NPB3 220 aa15.98■□□□□ 0.15
TRAV3-201ENST00000390425 ZC3H6P61129 1189 aaKnown RBP15.97■□□□□ 0.15
TRAV3-201ENST00000390425 FAM182BQ5T319 152 aa15.97■□□□□ 0.15
TRAV3-201ENST00000390425 SIN3AQ96ST3 1273 aa15.97■□□□□ 0.15
TRAV3-201ENST00000390425 LRP5O75197 1615 aa15.97■□□□□ 0.15
TRAV3-201ENST00000390425 SLIT3O75094 1523 aa15.96■□□□□ 0.15
TRAV3-201ENST00000390425 SRPK2P78362 688 aaKnown RBP15.96■□□□□ 0.15
TRAV3-201ENST00000390425 CPDO75976 1380 aa15.96■□□□□ 0.15
TRAV3-201ENST00000390425 PARP4Q9UKK3 1724 aaKnown RBP15.96■□□□□ 0.15
TRAV3-201ENST00000390425 WNK3Q9BYP7 1800 aa15.96■□□□□ 0.14
TRAV3-201ENST00000390425 COL18A1P39060 1754 aa15.95■□□□□ 0.14
TRAV3-201ENST00000390425 USP6P35125 1406 aa15.95■□□□□ 0.14
TRAV3-201ENST00000390425 SF3B2Q13435 895 aaKnown RBP15.95■□□□□ 0.14
TRAV3-201ENST00000390425 ABTB2Q8N961 1025 aa15.95■□□□□ 0.14
TRAV3-201ENST00000390425 DISP2A7MBM2 1401 aa15.94■□□□□ 0.14
TRAV3-201ENST00000390425 STRN4Q9NRL3 753 aa15.94■□□□□ 0.14
TRAV3-201ENST00000390425 RGPD5Q99666 1765 aa15.94■□□□□ 0.14
TRAV3-201ENST00000390425 RREB1Q92766 1687 aa15.93■□□□□ 0.14
TRAV3-201ENST00000390425 COL5A2P05997 1499 aaPredicted RBP15.93■□□□□ 0.14
TRAV3-201ENST00000390425 MON2Q7Z3U7 1717 aa15.93■□□□□ 0.14
TRAV3-201ENST00000390425 BRD4O60885 1362 aaPredicted RBP15.92■□□□□ 0.14
TRAV3-201ENST00000390425 BAG6P46379 1132 aa15.91■□□□□ 0.14
TRAV3-201ENST00000390425 CABP1Q9NZU7 370 aa15.91■□□□□ 0.14
TRAV3-201ENST00000390425 LRRC37A3O60309 1634 aa15.9■□□□□ 0.14
TRAV3-201ENST00000390425 ROCK2O75116 1388 aaKnown RBP15.9■□□□□ 0.14
TRAV3-201ENST00000390425 SBF2Q86WG5 1849 aa15.9■□□□□ 0.14
TRAV3-201ENST00000390425 LARP1Q6PKG0 1096 aaKnown RBP15.9■□□□□ 0.14
TRAV3-201ENST00000390425 NUP188Q5SRE5 1749 aa15.9■□□□□ 0.14
TRAV3-201ENST00000390425 PEAK1Q9H792 1746 aa15.9■□□□□ 0.14
TRAV3-201ENST00000390425 GCP02774 474 aa15.89■□□□□ 0.13
TRAV3-201ENST00000390425 EN1Q05925 392 aaPredicted RBP15.89■□□□□ 0.13
TRAV3-201ENST00000390425 BARGINQ6ZT62 677 aa15.89■□□□□ 0.13
TRAV3-201ENST00000390425 NLRP13Q86W25 1043 aa15.89■□□□□ 0.13
TRAV3-201ENST00000390425 USP35Q9P2H5 1018 aa15.89■□□□□ 0.13
TRAV3-201ENST00000390425 NEUROD1Q13562 356 aa15.88■□□□□ 0.13
TRAV3-201ENST00000390425 USP54Q70EL1 1684 aa15.88■□□□□ 0.13
TRAV3-201ENST00000390425 PSDA5PKW4 1024 aaPredicted RBP15.87■□□□□ 0.13
TRAV3-201ENST00000390425 EVC2Q86UK5 1308 aa15.87■□□□□ 0.13
TRAV3-201ENST00000390425 NFAT5O94916 1531 aa15.86■□□□□ 0.13
TRAV3-201ENST00000390425 EVA1CP58658 441 aa15.86■□□□□ 0.13
TRAV3-201ENST00000390425 AATKQ6ZMQ8 1374 aa15.86■□□□□ 0.13
TRAV3-201ENST00000390425 CRB1P82279 1406 aa15.85■□□□□ 0.13
TRAV3-201ENST00000390425 CPSF1Q10570 1443 aaKnown RBP15.85■□□□□ 0.13
TRAV3-201ENST00000390425 TRIM37O94972 964 aa15.85■□□□□ 0.13
TRAV3-201ENST00000390425 NLRP6P59044 892 aa15.85■□□□□ 0.13
TRAV3-201ENST00000390425 TCP11L2Q8N4U5 519 aa15.85■□□□□ 0.13
TRAV3-201ENST00000390425 FAM196AQ6ZSG2 479 aa15.84■□□□□ 0.13
TRAV3-201ENST00000390425 SBNO2Q9Y2G9 1366 aa15.84■□□□□ 0.13
TRAV3-201ENST00000390425 RGPD3A6NKT7 1758 aaPredicted RBP15.83■□□□□ 0.12
TRAV3-201ENST00000390425 LTN1O94822 1766 aa15.83■□□□□ 0.12
TRAV3-201ENST00000390425 RGPD4Q7Z3J3 1758 aa15.83■□□□□ 0.12
TRAV3-201ENST00000390425 EZH2Q15910 746 aaKnown RBP15.83■□□□□ 0.12
TRAV3-201ENST00000390425 TTC21BQ7Z4L5 1316 aa15.83■□□□□ 0.12
TRAV3-201ENST00000390425 CAMKK2Q96RR4 588 aa15.82■□□□□ 0.12
TRAV3-201ENST00000390425 THRAP3Q9Y2W1 955 aaKnown RBP15.82■□□□□ 0.12
TRAV3-201ENST00000390425 CD163L1Q9NR16 1453 aa15.82■□□□□ 0.12
TRAV3-201ENST00000390425 ZBTB7CA1YPR0 619 aa15.81■□□□□ 0.12
TRAV3-201ENST00000390425 PDE3BQ13370 1112 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms