RNA–Protein interactions for RNA: ENST00000390353.2

TRBV6-1-201, Transcript of T cell receptor beta variable 6-1, humanhuman

APPRIS P1 BASIC

Gene TRBV6-1, Length 401 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-1-201ENST00000390353 EP400Q96L91 3159 aa12.02□□□□□ -0.49
TRBV6-1-201ENST00000390353 NWD2Q9ULI1 1742 aa12.02□□□□□ -0.49
TRBV6-1-201ENST00000390353 ATP7BP35670 1465 aa12.02□□□□□ -0.49
TRBV6-1-201ENST00000390353 SPATA31A5Q5VU36 1347 aa12.01□□□□□ -0.49
TRBV6-1-201ENST00000390353 SPATA31A7Q8IWB4 1347 aa12.01□□□□□ -0.49
TRBV6-1-201ENST00000390353 PLEKHG3A1L390 1219 aa11.99□□□□□ -0.49
TRBV6-1-201ENST00000390353 SRPK2P78362 688 aaKnown RBP11.99□□□□□ -0.49
TRBV6-1-201ENST00000390353 NBPF8Q3BBV2 869 aa11.99□□□□□ -0.49
TRBV6-1-201ENST00000390353 POLR3AO14802 1390 aaPredicted RBP11.99□□□□□ -0.49
TRBV6-1-201ENST00000390353 BRD4O60885 1362 aaPredicted RBP11.99□□□□□ -0.49
TRBV6-1-201ENST00000390353 COL14A1Q05707 1796 aaKnown RBP11.98□□□□□ -0.49
TRBV6-1-201ENST00000390353 PLCH1Q4KWH8 1693 aa11.98□□□□□ -0.49
TRBV6-1-201ENST00000390353 EVA1CP58658 441 aa11.98□□□□□ -0.49
TRBV6-1-201ENST00000390353 ABTB2Q8N961 1025 aa11.98□□□□□ -0.49
TRBV6-1-201ENST00000390353 KIAA0232Q92628 1395 aa11.97□□□□□ -0.49
TRBV6-1-201ENST00000390353 ACEP12821 1306 aa11.97□□□□□ -0.49
TRBV6-1-201ENST00000390353 CENPJQ9HC77 1338 aaPredicted RBP11.97□□□□□ -0.49
TRBV6-1-201ENST00000390353 DEFB132Q7Z7B7 95 aa11.97□□□□□ -0.49
TRBV6-1-201ENST00000390353 NLRP13Q86W25 1043 aa11.97□□□□□ -0.49
TRBV6-1-201ENST00000390353 SPATA31A1Q5TZJ5 1347 aa11.96□□□□□ -0.49
TRBV6-1-201ENST00000390353 C11orf95C9JLR9 678 aaPredicted RBP11.96□□□□□ -0.49
TRBV6-1-201ENST00000390353 FAM196AQ6ZSG2 479 aa11.96□□□□□ -0.49
TRBV6-1-201ENST00000390353 TRPM3Q9HCF6 1732 aaPredicted RBP11.96□□□□□ -0.49
TRBV6-1-201ENST00000390353 RGPD8O14715 1765 aaPredicted RBP11.95□□□□□ -0.5
TRBV6-1-201ENST00000390353 ABCA3Q99758 1704 aa11.95□□□□□ -0.5
TRBV6-1-201ENST00000390353 ALS2Q96Q42 1657 aa11.95□□□□□ -0.5
TRBV6-1-201ENST00000390353 ZC3H6P61129 1189 aaKnown RBP11.95□□□□□ -0.5
TRBV6-1-201ENST00000390353 STRN4Q9NRL3 753 aa11.95□□□□□ -0.5
TRBV6-1-201ENST00000390353 ITSN1Q15811 1721 aa11.94□□□□□ -0.5
TRBV6-1-201ENST00000390353 CPDO75976 1380 aa11.94□□□□□ -0.5
TRBV6-1-201ENST00000390353 PDE3BQ13370 1112 aa11.94□□□□□ -0.5
TRBV6-1-201ENST00000390353 BARGINQ6ZT62 677 aa11.94□□□□□ -0.5
TRBV6-1-201ENST00000390353 CHRNA2Q15822 529 aa11.93□□□□□ -0.5
TRBV6-1-201ENST00000390353 NBPF1Q3BBV0 1214 aa11.93□□□□□ -0.5
TRBV6-1-201ENST00000390353 NUTM2GQ5VZR2 741 aa11.93□□□□□ -0.5
TRBV6-1-201ENST00000390353 THRAP3Q9Y2W1 955 aaKnown RBP11.93□□□□□ -0.5
TRBV6-1-201ENST00000390353 KIAA1210Q9ULL0 1709 aa11.93□□□□□ -0.5
TRBV6-1-201ENST00000390353 PPIP5K1Q6PFW1 1433 aa11.93□□□□□ -0.5
TRBV6-1-201ENST00000390353 PARD3Q8TEW0 1356 aa11.92□□□□□ -0.5
TRBV6-1-201ENST00000390353 USP19O94966 1318 aa11.92□□□□□ -0.5
TRBV6-1-201ENST00000390353 EVC2Q86UK5 1308 aa11.92□□□□□ -0.5
TRBV6-1-201ENST00000390353 ARHGEF28Q8N1W1 1705 aaKnown RBP11.92□□□□□ -0.5
TRBV6-1-201ENST00000390353 TCP11L2Q8N4U5 519 aa11.92□□□□□ -0.5
TRBV6-1-201ENST00000390353 DISP2A7MBM2 1401 aa11.92□□□□□ -0.5
TRBV6-1-201ENST00000390353 GCP02774 474 aa11.91□□□□□ -0.5
TRBV6-1-201ENST00000390353 CABP2Q9NPB3 220 aa11.91□□□□□ -0.5
TRBV6-1-201ENST00000390353 USP35Q9P2H5 1018 aa11.91□□□□□ -0.5
TRBV6-1-201ENST00000390353 SSH2Q76I76 1423 aa11.91□□□□□ -0.5
TRBV6-1-201ENST00000390353 NRAPQ86VF7 1730 aa11.91□□□□□ -0.5
TRBV6-1-201ENST00000390353 EN1Q05925 392 aaPredicted RBP11.9□□□□□ -0.5
TRBV6-1-201ENST00000390353 ZNF692Q9BU19 519 aaPredicted RBP11.9□□□□□ -0.5
TRBV6-1-201ENST00000390353 NLRP6P59044 892 aa11.89□□□□□ -0.51
TRBV6-1-201ENST00000390353 L3MBTL2Q969R5 705 aa11.89□□□□□ -0.51
TRBV6-1-201ENST00000390353 CABP1Q9NZU7 370 aa11.89□□□□□ -0.51
TRBV6-1-201ENST00000390353 THSD7AQ9UPZ6 1657 aa11.88□□□□□ -0.51
TRBV6-1-201ENST00000390353 TRIM37O94972 964 aa11.88□□□□□ -0.51
TRBV6-1-201ENST00000390353 APBA3O96018 575 aa11.88□□□□□ -0.51
TRBV6-1-201ENST00000390353 FAM182BQ5T319 152 aa11.88□□□□□ -0.51
TRBV6-1-201ENST00000390353 LARP1Q6PKG0 1096 aaKnown RBP11.88□□□□□ -0.51
TRBV6-1-201ENST00000390353 KCNH5Q8NCM2 988 aa11.88□□□□□ -0.51
TRBV6-1-201ENST00000390353 ROCK2O75116 1388 aaKnown RBP11.88□□□□□ -0.51
TRBV6-1-201ENST00000390353 BRWD3Q6RI45 1802 aa11.88□□□□□ -0.51
TRBV6-1-201ENST00000390353 TOPAZ1Q8N9V7 1692 aa11.87□□□□□ -0.51
TRBV6-1-201ENST00000390353 USP6P35125 1406 aa11.87□□□□□ -0.51
TRBV6-1-201ENST00000390353 PSDA5PKW4 1024 aaPredicted RBP11.87□□□□□ -0.51
TRBV6-1-201ENST00000390353 NBPF14Q5TI25 921 aa11.87□□□□□ -0.51
TRBV6-1-201ENST00000390353 CDCA7Q9BWT1 371 aaPredicted RBP11.87□□□□□ -0.51
TRBV6-1-201ENST00000390353 AATKQ6ZMQ8 1374 aa11.87□□□□□ -0.51
TRBV6-1-201ENST00000390353 CRYBG1Q9Y4K1 1723 aa11.86□□□□□ -0.51
TRBV6-1-201ENST00000390353 CAMKK2Q96RR4 588 aa11.86□□□□□ -0.51
TRBV6-1-201ENST00000390353 RGPD1P0DJD0 1748 aa11.86□□□□□ -0.51
TRBV6-1-201ENST00000390353 PHRF1Q9P1Y6 1649 aaKnown RBP11.86□□□□□ -0.51
TRBV6-1-201ENST00000390353 CRB1P82279 1406 aa11.86□□□□□ -0.51
TRBV6-1-201ENST00000390353 NRKQ7Z2Y5 1582 aa11.85□□□□□ -0.51
TRBV6-1-201ENST00000390353 ZBTB7CA1YPR0 619 aa11.85□□□□□ -0.51
TRBV6-1-201ENST00000390353 R3HDM1Q15032 1099 aaKnown RBP11.85□□□□□ -0.51
TRBV6-1-201ENST00000390353 TTC21AQ8NDW8 1320 aa11.85□□□□□ -0.51
TRBV6-1-201ENST00000390353 COL5A2P05997 1499 aaPredicted RBP11.84□□□□□ -0.51
TRBV6-1-201ENST00000390353 NEUROD1Q13562 356 aa11.84□□□□□ -0.51
TRBV6-1-201ENST00000390353 EZH2Q15910 746 aaKnown RBP11.84□□□□□ -0.51
TRBV6-1-201ENST00000390353 TOM1L2Q6ZVM7 507 aa11.84□□□□□ -0.51
TRBV6-1-201ENST00000390353 LRP5O75197 1615 aa11.84□□□□□ -0.51
TRBV6-1-201ENST00000390353 CAMTA1Q9Y6Y1 1673 aa11.84□□□□□ -0.51
TRBV6-1-201ENST00000390353 DDB1Q16531 1140 aa11.83□□□□□ -0.52
TRBV6-1-201ENST00000390353 CSB-PGBD3P0DP91 1061 aa11.82□□□□□ -0.52
TRBV6-1-201ENST00000390353 OVOS2A0A0G2JMS6 1433 aa11.82□□□□□ -0.52
TRBV6-1-201ENST00000390353 OVOS2A0A0J9YW53 1432 aa11.82□□□□□ -0.52
TRBV6-1-201ENST00000390353 OVOS2Q6IE36 1432 aa11.82□□□□□ -0.52
TRBV6-1-201ENST00000390353 TTC21BQ7Z4L5 1316 aa11.82□□□□□ -0.52
TRBV6-1-201ENST00000390353 WDR17Q8IZU2 1322 aa11.82□□□□□ -0.52
TRBV6-1-201ENST00000390353 SBNO2Q9Y2G9 1366 aa11.81□□□□□ -0.52
TRBV6-1-201ENST00000390353 SLC24A1O60721 1099 aa11.81□□□□□ -0.52
TRBV6-1-201ENST00000390353 SLIT3O75094 1523 aa11.81□□□□□ -0.52
TRBV6-1-201ENST00000390353 KTN1Q86UP2 1357 aaKnown RBP11.8□□□□□ -0.52
TRBV6-1-201ENST00000390353 CPSF1Q10570 1443 aaKnown RBP11.8□□□□□ -0.52
TRBV6-1-201ENST00000390353 ARHGEF25Q86VW2 580 aa11.8□□□□□ -0.52
TRBV6-1-201ENST00000390353 SIN3AQ96ST3 1273 aa11.8□□□□□ -0.52
TRBV6-1-201ENST00000390353 LMO7Q8WWI1 1683 aa11.8□□□□□ -0.52
TRBV6-1-201ENST00000390353 QRICH2Q9H0J4 1663 aa11.8□□□□□ -0.52
TRBV6-1-201ENST00000390353 HDGFL2Q7Z4V5 671 aaPredicted RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms