RNA–Protein interactions for RNA: ENST00000388835.3

KRT18-201, Transcript of keratin 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT18, Length 1,562 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT18-201ENST00000388835 CENPJQ9HC77 1338 aaPredicted RBP36.85■■■■□ 3.49
KRT18-201ENST00000388835 CRYBG1Q9Y4K1 1723 aa36.83■■■■□ 3.49
KRT18-201ENST00000388835 CCDC61Q9Y6R9 512 aa36.83■■■■□ 3.49
KRT18-201ENST00000388835 BRWD3Q6RI45 1802 aa36.82■■■■□ 3.49
KRT18-201ENST00000388835 ACEP12821 1306 aa36.82■■■■□ 3.49
KRT18-201ENST00000388835 BTG4Q9NY30 223 aa36.82■■■■□ 3.48
KRT18-201ENST00000388835 COL14A1Q05707 1796 aaKnown RBP36.8■■■■□ 3.48
KRT18-201ENST00000388835 SRPK2P78362 688 aaKnown RBP36.8■■■■□ 3.48
KRT18-201ENST00000388835 SEPT12Q8IYM1 358 aa36.8■■■■□ 3.48
KRT18-201ENST00000388835 QRICH2Q9H0J4 1663 aa36.8■■■■□ 3.48
KRT18-201ENST00000388835 EP400Q96L91 3159 aa36.8■■■■□ 3.48
KRT18-201ENST00000388835 NRAPQ86VF7 1730 aa36.8■■■■□ 3.48
KRT18-201ENST00000388835 POLR3AO14802 1390 aaPredicted RBP36.79■■■■□ 3.48
KRT18-201ENST00000388835 NBPF8Q3BBV2 869 aa36.78■■■■□ 3.48
KRT18-201ENST00000388835 NUTM2GQ5VZR2 741 aa36.78■■■■□ 3.48
KRT18-201ENST00000388835 PLEKHG3A1L390 1219 aa36.76■■■■□ 3.48
KRT18-201ENST00000388835 CABP2Q9NPB3 220 aa36.76■■■■□ 3.48
KRT18-201ENST00000388835 TRPM1Q7Z4N2 1603 aa36.76■■■■□ 3.47
KRT18-201ENST00000388835 PRDM11Q9NQV5 511 aa36.74■■■■□ 3.47
KRT18-201ENST00000388835 PPIP5K1Q6PFW1 1433 aa36.72■■■■□ 3.47
KRT18-201ENST00000388835 A0A0G2JS52 829 aa36.72■■■■□ 3.47
KRT18-201ENST00000388835 MYT1Q01538 1121 aa36.72■■■■□ 3.47
KRT18-201ENST00000388835 PHRF1Q9P1Y6 1649 aaKnown RBP36.72■■■■□ 3.47
KRT18-201ENST00000388835 ONECUT3O60422 494 aaPredicted RBP36.7■■■■□ 3.46
KRT18-201ENST00000388835 CCDC125Q86Z20 511 aa36.7■■■■□ 3.46
KRT18-201ENST00000388835 KIAA0232Q92628 1395 aa36.69■■■■□ 3.46
KRT18-201ENST00000388835 CHRNA2Q15822 529 aa36.68■■■■□ 3.46
KRT18-201ENST00000388835 FAM98CQ17RN3 349 aaKnown RBP36.68■■■■□ 3.46
KRT18-201ENST00000388835 ROCK2O75116 1388 aaKnown RBP36.68■■■■□ 3.46
KRT18-201ENST00000388835 ZC3H6P61129 1189 aaKnown RBP36.67■■■■□ 3.46
KRT18-201ENST00000388835 ABTB2Q8N961 1025 aa36.66■■■■□ 3.46
KRT18-201ENST00000388835 KRT27Q7Z3Y8 459 aa36.65■■■■□ 3.46
KRT18-201ENST00000388835 CABP1Q9NZU7 370 aa36.61■■■■□ 3.45
KRT18-201ENST00000388835 SPATA31A5Q5VU36 1347 aa36.61■■■■□ 3.45
KRT18-201ENST00000388835 SPATA31A7Q8IWB4 1347 aa36.61■■■■□ 3.45
KRT18-201ENST00000388835 BLMP54132 1417 aaPredicted RBP36.61■■■■□ 3.45
KRT18-201ENST00000388835 EVC2Q86UK5 1308 aa36.6■■■■□ 3.45
KRT18-201ENST00000388835 STRN4Q9NRL3 753 aa36.59■■■■□ 3.45
KRT18-201ENST00000388835 NRKQ7Z2Y5 1582 aa36.57■■■■□ 3.45
KRT18-201ENST00000388835 SF3B2Q13435 895 aaKnown RBP36.54■■■■□ 3.44
KRT18-201ENST00000388835 NLRP13Q86W25 1043 aa36.54■■■■□ 3.44
KRT18-201ENST00000388835 USP19O94966 1318 aa36.53■■■■□ 3.44
KRT18-201ENST00000388835 DEFB132Q7Z7B7 95 aa36.53■■■■□ 3.44
KRT18-201ENST00000388835 ZRANB1Q9UGI0 708 aa36.53■■■■□ 3.44
KRT18-201ENST00000388835 USP6P35125 1406 aa36.52■■■■□ 3.44
KRT18-201ENST00000388835 SPATA31A1Q5TZJ5 1347 aa36.5■■■■□ 3.43
KRT18-201ENST00000388835 EVA1CP58658 441 aa36.5■■■■□ 3.43
KRT18-201ENST00000388835 BRD4O60885 1362 aaPredicted RBP36.49■■■■□ 3.43
KRT18-201ENST00000388835 GCP02774 474 aa36.49■■■■□ 3.43
KRT18-201ENST00000388835 FAM182BQ5T319 152 aa36.49■■■■□ 3.43
KRT18-201ENST00000388835 THSD7AQ9UPZ6 1657 aa36.48■■■■□ 3.43
KRT18-201ENST00000388835 USP35Q9P2H5 1018 aa36.47■■■■□ 3.43
KRT18-201ENST00000388835 TONSLQ96HA7 1378 aa36.47■■■■□ 3.43
KRT18-201ENST00000388835 NLRP6P59044 892 aa36.46■■■■□ 3.43
KRT18-201ENST00000388835 CAMTA1Q9Y6Y1 1673 aa36.46■■■■□ 3.43
KRT18-201ENST00000388835 CPDO75976 1380 aa36.46■■■■□ 3.43
KRT18-201ENST00000388835 SSH2Q76I76 1423 aa36.45■■■■□ 3.43
KRT18-201ENST00000388835 ZBTB7CA1YPR0 619 aa36.44■■■■□ 3.42
KRT18-201ENST00000388835 CARD11Q9BXL7 1154 aa36.44■■■■□ 3.42
KRT18-201ENST00000388835 LMO7Q8WWI1 1683 aa36.44■■■■□ 3.42
KRT18-201ENST00000388835 LARP1Q6PKG0 1096 aaKnown RBP36.41■■■■□ 3.42
KRT18-201ENST00000388835 PIK3C2AO00443 1686 aa36.41■■■■□ 3.42
KRT18-201ENST00000388835 TRIM26Q12899 539 aaPredicted RBP36.4■■■■□ 3.42
KRT18-201ENST00000388835 AKAP12Q02952 1782 aa36.4■■■■□ 3.42
KRT18-201ENST00000388835 ZNF692Q9BU19 519 aaPredicted RBP36.37■■■■□ 3.41
KRT18-201ENST00000388835 SLIT3O75094 1523 aa36.36■■■■□ 3.41
KRT18-201ENST00000388835 BAG6P46379 1132 aa36.35■■■■□ 3.41
KRT18-201ENST00000388835 TTC21BQ7Z4L5 1316 aa36.35■■■■□ 3.41
KRT18-201ENST00000388835 RGPD1P0DJD0 1748 aa36.33■■■■□ 3.41
KRT18-201ENST00000388835 BARGINQ6ZT62 677 aa36.32■■■■□ 3.41
KRT18-201ENST00000388835 COL5A2P05997 1499 aaPredicted RBP36.32■■■■□ 3.4
KRT18-201ENST00000388835 TCP11L2Q8N4U5 519 aa36.32■■■■□ 3.4
KRT18-201ENST00000388835 SBNO2Q9Y2G9 1366 aa36.31■■■■□ 3.4
KRT18-201ENST00000388835 KTN1Q86UP2 1357 aaKnown RBP36.3■■■■□ 3.4
KRT18-201ENST00000388835 CPSF1Q10570 1443 aaKnown RBP36.3■■■■□ 3.4
KRT18-201ENST00000388835 SOX12O15370 315 aa36.28■■■■□ 3.4
KRT18-201ENST00000388835 AATKQ6ZMQ8 1374 aa36.27■■■■□ 3.4
KRT18-201ENST00000388835 EN1Q05925 392 aaPredicted RBP36.27■■■■□ 3.4
KRT18-201ENST00000388835 PDE3BQ13370 1112 aa36.27■■■■□ 3.4
KRT18-201ENST00000388835 TTC21AQ8NDW8 1320 aa36.26■■■■□ 3.4
KRT18-201ENST00000388835 SRCAPQ6ZRS2 3230 aa36.26■■■■□ 3.4
KRT18-201ENST00000388835 FAM196AQ6ZSG2 479 aa36.25■■■■□ 3.39
KRT18-201ENST00000388835 TNS1Q9HBL0 1735 aaKnown RBP36.25■■■■□ 3.39
KRT18-201ENST00000388835 TMC1Q8TDI8 760 aa36.24■■■■□ 3.39
KRT18-201ENST00000388835 MON2Q7Z3U7 1717 aa36.24■■■■□ 3.39
KRT18-201ENST00000388835 THRAP3Q9Y2W1 955 aaKnown RBP36.23■■■■□ 3.39
KRT18-201ENST00000388835 COL18A1P39060 1754 aa36.23■■■■□ 3.39
KRT18-201ENST00000388835 CRB1P82279 1406 aa36.23■■■■□ 3.39
KRT18-201ENST00000388835 TRIM37O94972 964 aa36.23■■■■□ 3.39
KRT18-201ENST00000388835 SUGP2Q8IX01 1082 aaKnown RBP eCLIP36.22■■■■□ 3.39
KRT18-201ENST00000388835 KCNH5Q8NCM2 988 aa36.21■■■■□ 3.39
KRT18-201ENST00000388835 AXIN2Q9Y2T1 843 aa36.2■■■■□ 3.39
KRT18-201ENST00000388835 RGPD5Q99666 1765 aa36.19■■■■□ 3.38
KRT18-201ENST00000388835 TOM1L2Q6ZVM7 507 aa36.19■■■■□ 3.38
KRT18-201ENST00000388835 ARHGEF25Q86VW2 580 aa36.19■■■■□ 3.38
KRT18-201ENST00000388835 SLC12A5Q9H2X9 1139 aa36.17■■■■□ 3.38
KRT18-201ENST00000388835 PARP4Q9UKK3 1724 aaKnown RBP36.16■■■■□ 3.38
KRT18-201ENST00000388835 CD163L1Q9NR16 1453 aa36.16■■■■□ 3.38
KRT18-201ENST00000388835 PSDA5PKW4 1024 aaPredicted RBP36.15■■■■□ 3.38
KRT18-201ENST00000388835 HDGFL2Q7Z4V5 671 aaPredicted RBP36.15■■■■□ 3.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms