RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 SOBPA7XYQ1 873 aa1.8□□□□□ -2.12
SNORD28-201ENST00000384706 RNF225M0QZC1 329 aaPredicted RBP1.8□□□□□ -2.12
SNORD28-201ENST00000384706 MS4A1P11836 297 aa1.8□□□□□ -2.12
SNORD28-201ENST00000384706 SH3BP2P78314 561 aa1.8□□□□□ -2.12
SNORD28-201ENST00000384706 MAP2K5Q13163 448 aa1.8□□□□□ -2.12
SNORD28-201ENST00000384706 SCARF1Q14162 830 aa1.8□□□□□ -2.12
SNORD28-201ENST00000384706 ARID5BQ14865 1188 aa1.8□□□□□ -2.12
SNORD28-201ENST00000384706 LINC01559Q495D7 138 aa1.8□□□□□ -2.12
SNORD28-201ENST00000384706 RETREG3Q86VR2 466 aa1.8□□□□□ -2.12
SNORD28-201ENST00000384706 BAP1Q92560 729 aa1.8□□□□□ -2.12
SNORD28-201ENST00000384706 PURBQ96QR8 312 aaKnown RBP1.8□□□□□ -2.12
SNORD28-201ENST00000384706 PLEKHG3A1L390 1219 aa1.79□□□□□ -2.12
SNORD28-201ENST00000384706 TULP1O00294 542 aaPredicted RBP1.79□□□□□ -2.12
SNORD28-201ENST00000384706 CCNYL3P0C7X3 344 aa1.79□□□□□ -2.12
SNORD28-201ENST00000384706 VSIG8P0DPA2 414 aa1.79□□□□□ -2.12
SNORD28-201ENST00000384706 FDX1P10109 184 aa1.79□□□□□ -2.12
SNORD28-201ENST00000384706 NDUFV2P19404 249 aa1.79□□□□□ -2.12
SNORD28-201ENST00000384706 CTHP32929 405 aa1.79□□□□□ -2.12
SNORD28-201ENST00000384706 WDR4P57081 412 aaKnown RBP1.79□□□□□ -2.12
SNORD28-201ENST00000384706 NNTQ13423 1086 aa1.79□□□□□ -2.12
SNORD28-201ENST00000384706 C6orf118Q5T5N4 469 aa1.79□□□□□ -2.12
SNORD28-201ENST00000384706 MRPL14Q6P1L8 145 aaKnown RBP1.79□□□□□ -2.12
SNORD28-201ENST00000384706 UNC93B1Q9H1C4 597 aa1.79□□□□□ -2.12
SNORD28-201ENST00000384706 GPCPD1Q9NPB8 672 aa1.79□□□□□ -2.12
SNORD28-201ENST00000384706 EVA1BQ9NVM1 165 aa1.79□□□□□ -2.12
SNORD28-201ENST00000384706 PCDHGC3Q9UN70 934 aa1.79□□□□□ -2.12
SNORD28-201ENST00000384706 TLL2Q9Y6L7 1015 aa1.79□□□□□ -2.12
SNORD28-201ENST00000384706 MINK1Q8N4C8 1332 aaPredicted RBP1.79□□□□□ -2.12
SNORD28-201ENST00000384706 MOXD2PA6NHM9 499 aa1.78□□□□□ -2.12
SNORD28-201ENST00000384706 MAN1A2O60476 641 aa1.78□□□□□ -2.12
SNORD28-201ENST00000384706 ADH1CP00326 375 aa1.78□□□□□ -2.12
SNORD28-201ENST00000384706 TIMP2P16035 220 aa1.78□□□□□ -2.12
SNORD28-201ENST00000384706 VARSP26640 1264 aaKnown RBP1.78□□□□□ -2.12
SNORD28-201ENST00000384706 SSTR3P32745 418 aaPredicted RBP1.78□□□□□ -2.12
SNORD28-201ENST00000384706 CLCN1P35523 988 aa1.78□□□□□ -2.12
SNORD28-201ENST00000384706 KCNH2Q12809 1159 aa1.78□□□□□ -2.12
SNORD28-201ENST00000384706 AGERQ15109 404 aa1.78□□□□□ -2.12
SNORD28-201ENST00000384706 PTPRNQ16849 979 aa1.78□□□□□ -2.12
SNORD28-201ENST00000384706 ZNF511Q8NB15 262 aa1.78□□□□□ -2.12
SNORD28-201ENST00000384706 PRR7Q8TB68 274 aa1.78□□□□□ -2.12
SNORD28-201ENST00000384706 CCDC102AQ96A19 550 aa1.78□□□□□ -2.12
SNORD28-201ENST00000384706 KRTAP9-8Q9BYQ0 159 aa1.78□□□□□ -2.12
SNORD28-201ENST00000384706 FAM217BQ9NTX9 383 aaPredicted RBP1.78□□□□□ -2.12
SNORD28-201ENST00000384706 UPP2O95045 317 aa1.77□□□□□ -2.13
SNORD28-201ENST00000384706 ZIC2O95409 532 aaPredicted RBP1.77□□□□□ -2.13
SNORD28-201ENST00000384706 BMP2P12643 396 aa1.77□□□□□ -2.13
SNORD28-201ENST00000384706 HAP1P54257 671 aaPredicted RBP1.77□□□□□ -2.13
SNORD28-201ENST00000384706 PLCB2Q00722 1185 aa1.77□□□□□ -2.13
SNORD28-201ENST00000384706 MTMR2Q13614 643 aa1.77□□□□□ -2.13
SNORD28-201ENST00000384706 SPIRE2Q8WWL2 714 aa1.77□□□□□ -2.13
SNORD28-201ENST00000384706 FOXJ1Q92949 421 aa1.77□□□□□ -2.13
SNORD28-201ENST00000384706 ITPKCQ96DU7 683 aa1.77□□□□□ -2.13
SNORD28-201ENST00000384706 KLF16Q9BXK1 252 aaPredicted RBP1.77□□□□□ -2.13
SNORD28-201ENST00000384706 KRTAP4-11Q9BYQ6 195 aa1.77□□□□□ -2.13
SNORD28-201ENST00000384706 ZFAND3Q9H8U3 227 aa1.77□□□□□ -2.13
SNORD28-201ENST00000384706 GOLGA2P5Q9HBQ8 144 aa1.77□□□□□ -2.13
SNORD28-201ENST00000384706 ADAMTS8Q9UP79 889 aa1.77□□□□□ -2.13
SNORD28-201ENST00000384706 SPDYE5A6NIY4 337 aa1.76□□□□□ -2.13
SNORD28-201ENST00000384706 PPFIA3O75145 1194 aa1.76□□□□□ -2.13
SNORD28-201ENST00000384706 ITGB2P05107 769 aa1.76□□□□□ -2.13
SNORD28-201ENST00000384706 GRM5P41594 1212 aa1.76□□□□□ -2.13
SNORD28-201ENST00000384706 TTLL12Q14166 644 aaPredicted RBP1.76□□□□□ -2.13
SNORD28-201ENST00000384706 MPNDQ8N594 471 aa1.76□□□□□ -2.13
SNORD28-201ENST00000384706 FAM174AQ8TBP5 190 aa1.76□□□□□ -2.13
SNORD28-201ENST00000384706 TSC1Q92574 1164 aa1.76□□□□□ -2.13
SNORD28-201ENST00000384706 BEGAINQ9BUH8 593 aa1.76□□□□□ -2.13
SNORD28-201ENST00000384706 KRTAP4-5Q9BYR2 181 aa1.76□□□□□ -2.13
SNORD28-201ENST00000384706 KDM2AQ9Y2K7 1162 aa1.76□□□□□ -2.13
SNORD28-201ENST00000384706 PCDHB15Q9Y5E8 787 aa1.76□□□□□ -2.13
SNORD28-201ENST00000384706 FIGNL2A6NMB9 653 aa1.75□□□□□ -2.13
SNORD28-201ENST00000384706 CFAP99D6REC4 459 aa1.75□□□□□ -2.13
SNORD28-201ENST00000384706 SPTLC1O15269 473 aa1.75□□□□□ -2.13
SNORD28-201ENST00000384706 PROCP04070 461 aa1.75□□□□□ -2.13
SNORD28-201ENST00000384706 NR3C2P08235 984 aa1.75□□□□□ -2.13
SNORD28-201ENST00000384706 NR5A1Q13285 461 aa1.75□□□□□ -2.13
SNORD28-201ENST00000384706 CSPP1Q1MSJ5 1256 aa1.75□□□□□ -2.13
SNORD28-201ENST00000384706 DESI1Q6ICB0 168 aa1.75□□□□□ -2.13
SNORD28-201ENST00000384706 KANK3Q6NY19 840 aa1.75□□□□□ -2.13
SNORD28-201ENST00000384706 LYPD8Q6UX82 237 aa1.75□□□□□ -2.13
SNORD28-201ENST00000384706 BPHLQ86WA6 291 aaPredicted RBP1.75□□□□□ -2.13
SNORD28-201ENST00000384706 LINC00528Q8N1L1 170 aa1.75□□□□□ -2.13
SNORD28-201ENST00000384706 GPR161Q8N6U8 529 aaKnown RBP1.75□□□□□ -2.13
SNORD28-201ENST00000384706 CNTNAP3BQ96NU0 1288 aa1.75□□□□□ -2.13
SNORD28-201ENST00000384706 CDK15Q96Q40 435 aa1.75□□□□□ -2.13
SNORD28-201ENST00000384706 SPOCK3Q9BQ16 436 aa1.75□□□□□ -2.13
SNORD28-201ENST00000384706 CNTNAP3Q9BZ76 1288 aa1.75□□□□□ -2.13
SNORD28-201ENST00000384706 MAP10Q9P2G4 905 aa1.75□□□□□ -2.13
SNORD28-201ENST00000384706 ARID1BQ8NFD5 2236 aaPredicted RBP1.74□□□□□ -2.13
SNORD28-201ENST00000384706 SOS2Q07890 1332 aaPredicted RBP1.74□□□□□ -2.13
SNORD28-201ENST00000384706 MAGEB6P1A0A0J9YX57 407 aa1.74□□□□□ -2.13
SNORD28-201ENST00000384706 NUTM2BA6NNL0 878 aaPredicted RBP1.74□□□□□ -2.13
SNORD28-201ENST00000384706 TTLL8A6PVC2 850 aa1.74□□□□□ -2.13
SNORD28-201ENST00000384706 NUTM2EB1AL46 878 aaPredicted RBP1.74□□□□□ -2.13
SNORD28-201ENST00000384706 K7ELQ4 463 aaPredicted RBP1.74□□□□□ -2.13
SNORD28-201ENST00000384706 MSTNO14793 375 aa1.74□□□□□ -2.13
SNORD28-201ENST00000384706 PER1O15534 1290 aaPredicted RBP1.74□□□□□ -2.13
SNORD28-201ENST00000384706 HRCP23327 699 aa1.74□□□□□ -2.13
SNORD28-201ENST00000384706 FSHRP23945 695 aa1.74□□□□□ -2.13
SNORD28-201ENST00000384706 KRT76Q01546 638 aa1.74□□□□□ -2.13
SNORD28-201ENST00000384706 PTSQ03393 145 aa1.74□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms