RNA–Protein interactions for RNA: ENST00000384526.1

RNU6-880P-201, Transcript of RNA, U6 small nuclear 880, pseudogene, humanhuman

BASIC

Gene RNU6-880P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-880P-201ENST00000384526 KRTAP4-8A0A0G2JLE6 195 aa4.53□□□□□ -1.68
RNU6-880P-201ENST00000384526 NANOS1Q8WY41 292 aaKnown RBP4.53□□□□□ -1.68
RNU6-880P-201ENST00000384526 PHOX2BQ99453 314 aa4.53□□□□□ -1.68
RNU6-880P-201ENST00000384526 NUDT12Q9BQG2 462 aa4.53□□□□□ -1.68
RNU6-880P-201ENST00000384526 HIC1Q14526 733 aa4.52□□□□□ -1.69
RNU6-880P-201ENST00000384526 LINC01559Q495D7 138 aa4.52□□□□□ -1.69
RNU6-880P-201ENST00000384526 MPNDQ8N594 471 aa4.52□□□□□ -1.69
RNU6-880P-201ENST00000384526 SOS2Q07890 1332 aaPredicted RBP4.51□□□□□ -1.69
RNU6-880P-201ENST00000384526 LINC00528Q8N1L1 170 aa4.51□□□□□ -1.69
RNU6-880P-201ENST00000384526 GALNT6Q8NCL4 622 aa4.51□□□□□ -1.69
RNU6-880P-201ENST00000384526 ITPKCQ96DU7 683 aa4.51□□□□□ -1.69
RNU6-880P-201ENST00000384526 PLEKHG3A1L390 1219 aa4.5□□□□□ -1.69
RNU6-880P-201ENST00000384526 ZIC2O95409 532 aaPredicted RBP4.5□□□□□ -1.69
RNU6-880P-201ENST00000384526 BMP2P12643 396 aa4.5□□□□□ -1.69
RNU6-880P-201ENST00000384526 PTSQ03393 145 aa4.5□□□□□ -1.69
RNU6-880P-201ENST00000384526 MEIOBQ8N635 442 aa4.5□□□□□ -1.69
RNU6-880P-201ENST00000384526 CD46P15529 392 aa4.49□□□□□ -1.69
RNU6-880P-201ENST00000384526 LYPD4Q6UWN0 246 aa4.49□□□□□ -1.69
RNU6-880P-201ENST00000384526 GPR37O15354 613 aa4.48□□□□□ -1.69
RNU6-880P-201ENST00000384526 HOXA2O43364 376 aa4.48□□□□□ -1.69
RNU6-880P-201ENST00000384526 KDM4AO75164 1064 aa4.48□□□□□ -1.69
RNU6-880P-201ENST00000384526 ADAMTS2O95450 1211 aa4.48□□□□□ -1.69
RNU6-880P-201ENST00000384526 NR3C2P08235 984 aa4.48□□□□□ -1.69
RNU6-880P-201ENST00000384526 VARSP26640 1264 aaKnown RBP4.48□□□□□ -1.69
RNU6-880P-201ENST00000384526 GUCA2AQ02747 115 aa4.48□□□□□ -1.69
RNU6-880P-201ENST00000384526 ZNF511Q8NB15 262 aa4.48□□□□□ -1.69
RNU6-880P-201ENST00000384526 SYMPKQ92797 1274 aaKnown RBP4.48□□□□□ -1.69
RNU6-880P-201ENST00000384526 ARHGEF1Q92888 912 aaKnown RBP4.48□□□□□ -1.69
RNU6-880P-201ENST00000384526 UNC93B1Q9H1C4 597 aa4.48□□□□□ -1.69
RNU6-880P-201ENST00000384526 CCNYL3P0C7X3 344 aa4.47□□□□□ -1.69
RNU6-880P-201ENST00000384526 BAG6P46379 1132 aa4.47□□□□□ -1.69
RNU6-880P-201ENST00000384526 ZNF800Q2TB10 664 aaPredicted RBP eCLIP4.47□□□□□ -1.69
RNU6-880P-201ENST00000384526 CCDC155Q8N6L0 562 aa4.47□□□□□ -1.69
RNU6-880P-201ENST00000384526 BAP1Q92560 729 aa4.47□□□□□ -1.69
RNU6-880P-201ENST00000384526 BTBD11A6QL63 1104 aa4.46□□□□□ -1.7
RNU6-880P-201ENST00000384526 GNPATO15228 680 aa4.46□□□□□ -1.7
RNU6-880P-201ENST00000384526 CELA2BP08218 269 aaPredicted RBP4.46□□□□□ -1.7
RNU6-880P-201ENST00000384526 RETREG3Q86VR2 466 aa4.46□□□□□ -1.7
RNU6-880P-201ENST00000384526 KCNV2Q8TDN2 545 aa4.46□□□□□ -1.7
RNU6-880P-201ENST00000384526 BBXQ8WY36 941 aaPredicted RBP4.46□□□□□ -1.7
RNU6-880P-201ENST00000384526 CNTNAP5Q8WYK1 1306 aa4.46□□□□□ -1.7
RNU6-880P-201ENST00000384526 PHF20L1A8MW92 1017 aa4.45□□□□□ -1.7
RNU6-880P-201ENST00000384526 USP46P62068 366 aa4.45□□□□□ -1.7
RNU6-880P-201ENST00000384526 MAP3K10Q02779 954 aa4.45□□□□□ -1.7
RNU6-880P-201ENST00000384526 KRTAP19-1Q8IUB9 90 aa4.45□□□□□ -1.7
RNU6-880P-201ENST00000384526 VWA5B2Q8N398 1253 aa4.45□□□□□ -1.7
RNU6-880P-201ENST00000384526 CDK15Q96Q40 435 aa4.45□□□□□ -1.7
RNU6-880P-201ENST00000384526 CDC14CA4D256 554 aa4.44□□□□□ -1.7
RNU6-880P-201ENST00000384526 SLC35F4A4IF30 521 aa4.44□□□□□ -1.7
RNU6-880P-201ENST00000384526 TTLL8A6PVC2 850 aa4.44□□□□□ -1.7
RNU6-880P-201ENST00000384526 UPP2O95045 317 aa4.44□□□□□ -1.7
RNU6-880P-201ENST00000384526 FURINP09958 794 aa4.44□□□□□ -1.7
RNU6-880P-201ENST00000384526 MS4A1P11836 297 aa4.44□□□□□ -1.7
RNU6-880P-201ENST00000384526 ITGA6P23229 1130 aa4.44□□□□□ -1.7
RNU6-880P-201ENST00000384526 PTPRNQ16849 979 aa4.44□□□□□ -1.7
RNU6-880P-201ENST00000384526 ITGB7P26010 798 aa4.43□□□□□ -1.7
RNU6-880P-201ENST00000384526 SRSF11Q05519 484 aaKnown RBP4.43□□□□□ -1.7
RNU6-880P-201ENST00000384526 GAS6Q14393 721 aa4.43□□□□□ -1.7
RNU6-880P-201ENST00000384526 SPRYD3Q8NCJ5 442 aa4.43□□□□□ -1.7
RNU6-880P-201ENST00000384526 FAM174AQ8TBP5 190 aa4.43□□□□□ -1.7
RNU6-880P-201ENST00000384526 NR5A1Q13285 461 aa4.42□□□□□ -1.7
RNU6-880P-201ENST00000384526 SV2AQ7L0J3 742 aa4.42□□□□□ -1.7
RNU6-880P-201ENST00000384526 SH3RF1Q7Z6J0 888 aa4.42□□□□□ -1.7
RNU6-880P-201ENST00000384526 EVA1BQ9NVM1 165 aa4.42□□□□□ -1.7
RNU6-880P-201ENST00000384526 FIGNL2A6NMB9 653 aa4.41□□□□□ -1.7
RNU6-880P-201ENST00000384526 GRM5P41594 1212 aa4.41□□□□□ -1.7
RNU6-880P-201ENST00000384526 KCNH2Q12809 1159 aa4.41□□□□□ -1.7
RNU6-880P-201ENST00000384526 ARID5BQ14865 1188 aa4.41□□□□□ -1.7
RNU6-880P-201ENST00000384526 TSEN34Q9BSV6 310 aaKnown RBP4.41□□□□□ -1.7
RNU6-880P-201ENST00000384526 KRBA1A5PL33 1030 aa4.4□□□□□ -1.71
RNU6-880P-201ENST00000384526 PODNQ7Z5L7 613 aa4.4□□□□□ -1.71
RNU6-880P-201ENST00000384526 FOXJ1Q92949 421 aa4.4□□□□□ -1.71
RNU6-880P-201ENST00000384526 SEMA3EO15041 775 aa4.39□□□□□ -1.71
RNU6-880P-201ENST00000384526 SPTLC1O15269 473 aa4.39□□□□□ -1.71
RNU6-880P-201ENST00000384526 RBM26Q5T8P6 1007 aaKnown RBP4.39□□□□□ -1.71
RNU6-880P-201ENST00000384526 BEND7Q8N7W2 519 aaPredicted RBP4.39□□□□□ -1.71
RNU6-880P-201ENST00000384526 ENAMQ9NRM1 1142 aa4.39□□□□□ -1.71
RNU6-880P-201ENST00000384526 PCDHGC3Q9UN70 934 aa4.39□□□□□ -1.71
RNU6-880P-201ENST00000384526 SENP3-EIF4A1A0A087X0R7 540 aa4.38□□□□□ -1.71
RNU6-880P-201ENST00000384526 FSHRP23945 695 aa4.38□□□□□ -1.71
RNU6-880P-201ENST00000384526 C4orf48Q5BLP8 95 aa4.38□□□□□ -1.71
RNU6-880P-201ENST00000384526 SPINT1O43278 529 aa4.37□□□□□ -1.71
RNU6-880P-201ENST00000384526 KRTAP4-7Q9BYR0 210 aa4.37□□□□□ -1.71
RNU6-880P-201ENST00000384526 CUEDC1Q9NWM3 386 aaPredicted RBP4.36□□□□□ -1.71
RNU6-880P-201ENST00000384526 C6orf229H3BNL8 230 aa4.35□□□□□ -1.71
RNU6-880P-201ENST00000384526 BCRP11274 1271 aa4.35□□□□□ -1.71
RNU6-880P-201ENST00000384526 COL8A1P27658 744 aa4.35□□□□□ -1.71
RNU6-880P-201ENST00000384526 NEDD1Q8NHV4 660 aa4.35□□□□□ -1.71
RNU6-880P-201ENST00000384526 FDX1P10109 184 aa4.34□□□□□ -1.71
RNU6-880P-201ENST00000384526 CBLBQ13191 982 aa4.34□□□□□ -1.71
RNU6-880P-201ENST00000384526 ZMYM1Q5SVZ6 1142 aa4.34□□□□□ -1.71
RNU6-880P-201ENST00000384526 ACDQ96AP0 544 aa4.34□□□□□ -1.71
RNU6-880P-201ENST00000384526 C1QTNF2Q9BXJ5 285 aa4.34□□□□□ -1.71
RNU6-880P-201ENST00000384526 IGF1RP08069 1367 aa4.34□□□□□ -1.71
RNU6-880P-201ENST00000384526 CTSOP43234 321 aaPredicted RBP4.33□□□□□ -1.72
RNU6-880P-201ENST00000384526 SNRPNP63162 240 aaKnown RBP4.33□□□□□ -1.72
RNU6-880P-201ENST00000384526 MDM2Q00987 491 aaPredicted RBP4.33□□□□□ -1.72
RNU6-880P-201ENST00000384526 FOXD4L6Q3SYB3 417 aaPredicted RBP4.33□□□□□ -1.72
RNU6-880P-201ENST00000384526 FOXD4L3Q6VB84 417 aaPredicted RBP4.33□□□□□ -1.72
RNU6-880P-201ENST00000384526 Q6ZVU0 165 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms