RNA–Protein interactions for RNA: ENST00000381575.6

SHOX-202, Transcript of short stature homeobox, humanhuman

TSL 1 (best) BASIC

Gene SHOX, Length 1,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-202ENST00000381575 SRCAPQ6ZRS2 3230 aa20.51■□□□□ 0.87
SHOX-202ENST00000381575 QRICH2Q9H0J4 1663 aa20.5■□□□□ 0.87
SHOX-202ENST00000381575 COL14A1Q05707 1796 aaKnown RBP20.5■□□□□ 0.87
SHOX-202ENST00000381575 SIN3AQ96ST3 1273 aa20.49■□□□□ 0.87
SHOX-202ENST00000381575 PHRF1Q9P1Y6 1649 aaKnown RBP20.49■□□□□ 0.87
SHOX-202ENST00000381575 VPS72Q15906 364 aa20.48■□□□□ 0.87
SHOX-202ENST00000381575 NUTM2GQ5VZR2 741 aa20.47■□□□□ 0.87
SHOX-202ENST00000381575 SEPT12Q8IYM1 358 aa20.46■□□□□ 0.87
SHOX-202ENST00000381575 L3MBTL2Q969R5 705 aa20.46■□□□□ 0.87
SHOX-202ENST00000381575 BTG4Q9NY30 223 aa20.46■□□□□ 0.87
SHOX-202ENST00000381575 TRPM1Q7Z4N2 1603 aa20.45■□□□□ 0.86
SHOX-202ENST00000381575 NEUROD1Q13562 356 aa20.45■□□□□ 0.86
SHOX-202ENST00000381575 ACEP12821 1306 aa20.44■□□□□ 0.86
SHOX-202ENST00000381575 CENPJQ9HC77 1338 aaPredicted RBP20.43■□□□□ 0.86
SHOX-202ENST00000381575 A0A0G2JS52 829 aa20.43■□□□□ 0.86
SHOX-202ENST00000381575 MYT1Q01538 1121 aa20.43■□□□□ 0.86
SHOX-202ENST00000381575 POLR3AO14802 1390 aaPredicted RBP20.42■□□□□ 0.86
SHOX-202ENST00000381575 SRPK2P78362 688 aaKnown RBP20.42■□□□□ 0.86
SHOX-202ENST00000381575 CABP2Q9NPB3 220 aa20.42■□□□□ 0.86
SHOX-202ENST00000381575 CHRNA2Q15822 529 aa20.41■□□□□ 0.86
SHOX-202ENST00000381575 FAM98CQ17RN3 349 aaKnown RBP20.41■□□□□ 0.86
SHOX-202ENST00000381575 NBPF8Q3BBV2 869 aa20.41■□□□□ 0.86
SHOX-202ENST00000381575 PRDM11Q9NQV5 511 aa20.41■□□□□ 0.86
SHOX-202ENST00000381575 CCDC61Q9Y6R9 512 aa20.41■□□□□ 0.86
SHOX-202ENST00000381575 KIAA0232Q92628 1395 aa20.4■□□□□ 0.86
SHOX-202ENST00000381575 PPIP5K1Q6PFW1 1433 aa20.4■□□□□ 0.86
SHOX-202ENST00000381575 ZC3H6P61129 1189 aaKnown RBP20.39■□□□□ 0.85
SHOX-202ENST00000381575 NRKQ7Z2Y5 1582 aa20.39■□□□□ 0.85
SHOX-202ENST00000381575 PLEKHG3A1L390 1219 aa20.38■□□□□ 0.85
SHOX-202ENST00000381575 KRT27Q7Z3Y8 459 aa20.37■□□□□ 0.85
SHOX-202ENST00000381575 BLMP54132 1417 aaPredicted RBP20.37■□□□□ 0.85
SHOX-202ENST00000381575 ONECUT3O60422 494 aaPredicted RBP20.36■□□□□ 0.85
SHOX-202ENST00000381575 DEFB132Q7Z7B7 95 aa20.35■□□□□ 0.85
SHOX-202ENST00000381575 THSD7AQ9UPZ6 1657 aa20.35■□□□□ 0.85
SHOX-202ENST00000381575 FAM182BQ5T319 152 aa20.34■□□□□ 0.85
SHOX-202ENST00000381575 CCDC125Q86Z20 511 aa20.34■□□□□ 0.85
SHOX-202ENST00000381575 ABTB2Q8N961 1025 aa20.34■□□□□ 0.85
SHOX-202ENST00000381575 STRN4Q9NRL3 753 aa20.34■□□□□ 0.85
SHOX-202ENST00000381575 SPATA31A5Q5VU36 1347 aa20.34■□□□□ 0.85
SHOX-202ENST00000381575 SPATA31A7Q8IWB4 1347 aa20.34■□□□□ 0.85
SHOX-202ENST00000381575 ROCK2O75116 1388 aaKnown RBP20.34■□□□□ 0.85
SHOX-202ENST00000381575 CABP1Q9NZU7 370 aa20.32■□□□□ 0.84
SHOX-202ENST00000381575 ZRANB1Q9UGI0 708 aa20.31■□□□□ 0.84
SHOX-202ENST00000381575 LMO7Q8WWI1 1683 aa20.3■□□□□ 0.84
SHOX-202ENST00000381575 CAMTA1Q9Y6Y1 1673 aa20.3■□□□□ 0.84
SHOX-202ENST00000381575 USP19O94966 1318 aa20.3■□□□□ 0.84
SHOX-202ENST00000381575 PIK3C2AO00443 1686 aa20.29■□□□□ 0.84
SHOX-202ENST00000381575 SF3B2Q13435 895 aaKnown RBP20.29■□□□□ 0.84
SHOX-202ENST00000381575 USP35Q9P2H5 1018 aa20.29■□□□□ 0.84
SHOX-202ENST00000381575 USP6P35125 1406 aa20.29■□□□□ 0.84
SHOX-202ENST00000381575 AKAP12Q02952 1782 aa20.28■□□□□ 0.84
SHOX-202ENST00000381575 SPATA31A1Q5TZJ5 1347 aa20.28■□□□□ 0.84
SHOX-202ENST00000381575 ZBTB7CA1YPR0 619 aa20.28■□□□□ 0.84
SHOX-202ENST00000381575 RGPD1P0DJD0 1748 aa20.27■□□□□ 0.84
SHOX-202ENST00000381575 EVC2Q86UK5 1308 aa20.27■□□□□ 0.84
SHOX-202ENST00000381575 SSH2Q76I76 1423 aa20.27■□□□□ 0.84
SHOX-202ENST00000381575 TNS1Q9HBL0 1735 aaKnown RBP20.25■□□□□ 0.83
SHOX-202ENST00000381575 GCP02774 474 aa20.25■□□□□ 0.83
SHOX-202ENST00000381575 LARP1Q6PKG0 1096 aaKnown RBP20.25■□□□□ 0.83
SHOX-202ENST00000381575 NLRP13Q86W25 1043 aa20.25■□□□□ 0.83
SHOX-202ENST00000381575 EVA1CP58658 441 aa20.24■□□□□ 0.83
SHOX-202ENST00000381575 CPDO75976 1380 aa20.24■□□□□ 0.83
SHOX-202ENST00000381575 NLRP6P59044 892 aa20.23■□□□□ 0.83
SHOX-202ENST00000381575 SLIT3O75094 1523 aa20.23■□□□□ 0.83
SHOX-202ENST00000381575 RGPD5Q99666 1765 aa20.22■□□□□ 0.83
SHOX-202ENST00000381575 COL5A2P05997 1499 aaPredicted RBP20.21■□□□□ 0.83
SHOX-202ENST00000381575 BRD4O60885 1362 aaPredicted RBP20.2■□□□□ 0.82
SHOX-202ENST00000381575 BAG6P46379 1132 aa20.2■□□□□ 0.82
SHOX-202ENST00000381575 COL18A1P39060 1754 aa20.2■□□□□ 0.82
SHOX-202ENST00000381575 MON2Q7Z3U7 1717 aa20.19■□□□□ 0.82
SHOX-202ENST00000381575 TONSLQ96HA7 1378 aa20.19■□□□□ 0.82
SHOX-202ENST00000381575 SOX12O15370 315 aa20.19■□□□□ 0.82
SHOX-202ENST00000381575 EN1Q05925 392 aaPredicted RBP20.19■□□□□ 0.82
SHOX-202ENST00000381575 CARD11Q9BXL7 1154 aa20.19■□□□□ 0.82
SHOX-202ENST00000381575 TTC21BQ7Z4L5 1316 aa20.17■□□□□ 0.82
SHOX-202ENST00000381575 TCP11L2Q8N4U5 519 aa20.17■□□□□ 0.82
SHOX-202ENST00000381575 PSDA5PKW4 1024 aaPredicted RBP20.16■□□□□ 0.82
SHOX-202ENST00000381575 TRIM37O94972 964 aa20.16■□□□□ 0.82
SHOX-202ENST00000381575 PARP4Q9UKK3 1724 aaKnown RBP20.16■□□□□ 0.82
SHOX-202ENST00000381575 BARGINQ6ZT62 677 aa20.15■□□□□ 0.82
SHOX-202ENST00000381575 WNK3Q9BYP7 1800 aa20.15■□□□□ 0.82
SHOX-202ENST00000381575 KTN1Q86UP2 1357 aaKnown RBP20.15■□□□□ 0.82
SHOX-202ENST00000381575 CPSF1Q10570 1443 aaKnown RBP20.14■□□□□ 0.82
SHOX-202ENST00000381575 PDE3BQ13370 1112 aa20.13■□□□□ 0.81
SHOX-202ENST00000381575 AATKQ6ZMQ8 1374 aa20.13■□□□□ 0.81
SHOX-202ENST00000381575 CRB1P82279 1406 aa20.13■□□□□ 0.81
SHOX-202ENST00000381575 LRRC37A3O60309 1634 aa20.12■□□□□ 0.81
SHOX-202ENST00000381575 FAM196AQ6ZSG2 479 aa20.12■□□□□ 0.81
SHOX-202ENST00000381575 ZNF692Q9BU19 519 aaPredicted RBP20.12■□□□□ 0.81
SHOX-202ENST00000381575 AXIN2Q9Y2T1 843 aa20.12■□□□□ 0.81
SHOX-202ENST00000381575 SBNO2Q9Y2G9 1366 aa20.12■□□□□ 0.81
SHOX-202ENST00000381575 NFAT5O94916 1531 aa20.12■□□□□ 0.81
SHOX-202ENST00000381575 EZH2Q15910 746 aaKnown RBP20.11■□□□□ 0.81
SHOX-202ENST00000381575 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.11■□□□□ 0.81
SHOX-202ENST00000381575 CD163L1Q9NR16 1453 aa20.11■□□□□ 0.81
SHOX-202ENST00000381575 DISP2A7MBM2 1401 aa20.1■□□□□ 0.81
SHOX-202ENST00000381575 TTC21AQ8NDW8 1320 aa20.09■□□□□ 0.81
SHOX-202ENST00000381575 TRIM26Q12899 539 aaPredicted RBP20.09■□□□□ 0.81
SHOX-202ENST00000381575 TOM1L2Q6ZVM7 507 aa20.09■□□□□ 0.81
SHOX-202ENST00000381575 TMC1Q8TDI8 760 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms