RNA–Protein interactions for RNA: ENST00000381565.2

APOBEC3F-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 1 (best) BASIC

Gene APOBEC3F, Length 616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-202ENST00000381565 GLI3P10071 1580 aa16.57■□□□□ 0.24
APOBEC3F-202ENST00000381565 FOXO3O43524 673 aa16.57■□□□□ 0.24
APOBEC3F-202ENST00000381565 CENPJQ9HC77 1338 aaPredicted RBP16.56■□□□□ 0.24
APOBEC3F-202ENST00000381565 PHF8Q9UPP1 1060 aa16.56■□□□□ 0.24
APOBEC3F-202ENST00000381565 SLIT2O94813 1529 aa16.55■□□□□ 0.24
APOBEC3F-202ENST00000381565 TNS3Q68CZ2 1445 aa16.54■□□□□ 0.24
APOBEC3F-202ENST00000381565 AKAP12Q02952 1782 aa16.54■□□□□ 0.24
APOBEC3F-202ENST00000381565 GJD4Q96KN9 370 aaPredicted RBP16.53■□□□□ 0.24
APOBEC3F-202ENST00000381565 SPATA31A3Q5VYP0 1347 aa16.52■□□□□ 0.24
APOBEC3F-202ENST00000381565 CLSPNQ9HAW4 1339 aa16.52■□□□□ 0.24
APOBEC3F-202ENST00000381565 PMFBP1Q8TBY8 1022 aa16.52■□□□□ 0.24
APOBEC3F-202ENST00000381565 PLCH1Q4KWH8 1693 aa16.51■□□□□ 0.23
APOBEC3F-202ENST00000381565 CDK19Q9BWU1 502 aa16.51■□□□□ 0.23
APOBEC3F-202ENST00000381565 PHRF1Q9P1Y6 1649 aaKnown RBP16.51■□□□□ 0.23
APOBEC3F-202ENST00000381565 SBNO1A3KN83 1393 aa16.51■□□□□ 0.23
APOBEC3F-202ENST00000381565 NUDT16Q96DE0 195 aaKnown RBP16.5■□□□□ 0.23
APOBEC3F-202ENST00000381565 ZRANB1Q9UGI0 708 aa16.5■□□□□ 0.23
APOBEC3F-202ENST00000381565 NRKQ7Z2Y5 1582 aa16.49■□□□□ 0.23
APOBEC3F-202ENST00000381565 KRT28Q7Z3Y7 464 aa16.49■□□□□ 0.23
APOBEC3F-202ENST00000381565 CCDC125Q86Z20 511 aa16.49■□□□□ 0.23
APOBEC3F-202ENST00000381565 UNC5CLQ8IV45 518 aa16.49■□□□□ 0.23
APOBEC3F-202ENST00000381565 POLR3AO14802 1390 aaPredicted RBP16.49■□□□□ 0.23
APOBEC3F-202ENST00000381565 SBNO2Q9Y2G9 1366 aa16.49■□□□□ 0.23
APOBEC3F-202ENST00000381565 BRWD3Q6RI45 1802 aa16.48■□□□□ 0.23
APOBEC3F-202ENST00000381565 MON2Q7Z3U7 1717 aa16.48■□□□□ 0.23
APOBEC3F-202ENST00000381565 PPIP5K1Q6PFW1 1433 aa16.47■□□□□ 0.23
APOBEC3F-202ENST00000381565 BLMP54132 1417 aaPredicted RBP16.46■□□□□ 0.23
APOBEC3F-202ENST00000381565 NWD2Q9ULI1 1742 aa16.46■□□□□ 0.23
APOBEC3F-202ENST00000381565 CARD11Q9BXL7 1154 aa16.46■□□□□ 0.23
APOBEC3F-202ENST00000381565 NRAPQ86VF7 1730 aa16.45■□□□□ 0.22
APOBEC3F-202ENST00000381565 CABP2Q9NPB3 220 aa16.45■□□□□ 0.22
APOBEC3F-202ENST00000381565 PIK3C2AO00443 1686 aa16.44■□□□□ 0.22
APOBEC3F-202ENST00000381565 ARHGEF10O15013 1369 aa16.44■□□□□ 0.22
APOBEC3F-202ENST00000381565 PSME1Q06323 249 aa16.44■□□□□ 0.22
APOBEC3F-202ENST00000381565 U3KPZ7 1027 aaPredicted RBP16.44■□□□□ 0.22
APOBEC3F-202ENST00000381565 MYCNP04198 464 aaPredicted RBP16.43■□□□□ 0.22
APOBEC3F-202ENST00000381565 SRPK2P78362 688 aaKnown RBP16.43■□□□□ 0.22
APOBEC3F-202ENST00000381565 CABLES1Q8TDN4 633 aa16.43■□□□□ 0.22
APOBEC3F-202ENST00000381565 CCDC61Q9Y6R9 512 aa16.43■□□□□ 0.22
APOBEC3F-202ENST00000381565 PLEKHG3A1L390 1219 aa16.42■□□□□ 0.22
APOBEC3F-202ENST00000381565 VPS72Q15906 364 aa16.42■□□□□ 0.22
APOBEC3F-202ENST00000381565 DEFB132Q7Z7B7 95 aa16.42■□□□□ 0.22
APOBEC3F-202ENST00000381565 ACEP12821 1306 aa16.42■□□□□ 0.22
APOBEC3F-202ENST00000381565 EVC2Q86UK5 1308 aa16.42■□□□□ 0.22
APOBEC3F-202ENST00000381565 SEPT12Q8IYM1 358 aa16.41■□□□□ 0.22
APOBEC3F-202ENST00000381565 NGDNQ8NEJ9 315 aaKnown RBP16.41■□□□□ 0.22
APOBEC3F-202ENST00000381565 COL14A1Q05707 1796 aaKnown RBP16.41■□□□□ 0.22
APOBEC3F-202ENST00000381565 ONECUT3O60422 494 aaPredicted RBP16.4■□□□□ 0.22
APOBEC3F-202ENST00000381565 TIMELESSQ9UNS1 1208 aa16.4■□□□□ 0.22
APOBEC3F-202ENST00000381565 USP54Q70EL1 1684 aa16.4■□□□□ 0.22
APOBEC3F-202ENST00000381565 CCER1Q8TC90 406 aaPredicted RBP16.39■□□□□ 0.21
APOBEC3F-202ENST00000381565 USP6P35125 1406 aa16.38■□□□□ 0.21
APOBEC3F-202ENST00000381565 MYOM1P52179 1685 aa16.38■□□□□ 0.21
APOBEC3F-202ENST00000381565 CD163L1Q9NR16 1453 aa16.38■□□□□ 0.21
APOBEC3F-202ENST00000381565 USP47Q96K76 1375 aa16.38■□□□□ 0.21
APOBEC3F-202ENST00000381565 LRP5O75197 1615 aa16.37■□□□□ 0.21
APOBEC3F-202ENST00000381565 SSH2Q76I76 1423 aa16.37■□□□□ 0.21
APOBEC3F-202ENST00000381565 TESK2Q96S53 571 aa16.37■□□□□ 0.21
APOBEC3F-202ENST00000381565 FAM83GA6ND36 823 aa16.36■□□□□ 0.21
APOBEC3F-202ENST00000381565 PLEKHG5O94827 1062 aa16.36■□□□□ 0.21
APOBEC3F-202ENST00000381565 LMOD2Q6P5Q4 547 aa16.36■□□□□ 0.21
APOBEC3F-202ENST00000381565 CABP1Q9NZU7 370 aa16.36■□□□□ 0.21
APOBEC3F-202ENST00000381565 CPSF1Q10570 1443 aaKnown RBP16.36■□□□□ 0.21
APOBEC3F-202ENST00000381565 LMO7Q8WWI1 1683 aa16.35■□□□□ 0.21
APOBEC3F-202ENST00000381565 SLIT3O75094 1523 aa16.35■□□□□ 0.21
APOBEC3F-202ENST00000381565 ST20-MTHFSA0A0A6YYL1 179 aa16.34■□□□□ 0.21
APOBEC3F-202ENST00000381565 PAK3O75914 559 aaPredicted RBP16.34■□□□□ 0.21
APOBEC3F-202ENST00000381565 HAP1P54257 671 aaPredicted RBP16.34■□□□□ 0.21
APOBEC3F-202ENST00000381565 KRT27Q7Z3Y8 459 aa16.34■□□□□ 0.21
APOBEC3F-202ENST00000381565 RNF39Q9H2S5 420 aa16.34■□□□□ 0.21
APOBEC3F-202ENST00000381565 BRD4O60885 1362 aaPredicted RBP16.33■□□□□ 0.2
APOBEC3F-202ENST00000381565 USP19O94966 1318 aa16.31■□□□□ 0.2
APOBEC3F-202ENST00000381565 CCDC9Q9Y3X0 531 aaKnown RBP16.31■□□□□ 0.2
APOBEC3F-202ENST00000381565 COL18A1P39060 1754 aa16.31■□□□□ 0.2
APOBEC3F-202ENST00000381565 RGPD5Q99666 1765 aa16.31■□□□□ 0.2
APOBEC3F-202ENST00000381565 THSD7AQ9UPZ6 1657 aa16.3■□□□□ 0.2
APOBEC3F-202ENST00000381565 SF3B2Q13435 895 aaKnown RBP16.3■□□□□ 0.2
APOBEC3F-202ENST00000381565 FAM98CQ17RN3 349 aaKnown RBP16.3■□□□□ 0.2
APOBEC3F-202ENST00000381565 LTN1O94822 1766 aa16.29■□□□□ 0.2
APOBEC3F-202ENST00000381565 NUTM2GQ5VZR2 741 aa16.29■□□□□ 0.2
APOBEC3F-202ENST00000381565 BTG4Q9NY30 223 aa16.29■□□□□ 0.2
APOBEC3F-202ENST00000381565 KIF20BQ96Q89 1820 aa16.29■□□□□ 0.2
APOBEC3F-202ENST00000381565 TNS1Q9HBL0 1735 aaKnown RBP16.28■□□□□ 0.2
APOBEC3F-202ENST00000381565 KTN1Q86UP2 1357 aaKnown RBP16.27■□□□□ 0.2
APOBEC3F-202ENST00000381565 PSDA5PKW4 1024 aaPredicted RBP16.27■□□□□ 0.2
APOBEC3F-202ENST00000381565 ABTB2Q8N961 1025 aa16.27■□□□□ 0.2
APOBEC3F-202ENST00000381565 NFAT5O94916 1531 aa16.27■□□□□ 0.2
APOBEC3F-202ENST00000381565 A0A1W2PP64 1363 aa16.26■□□□□ 0.19
APOBEC3F-202ENST00000381565 KIAA0232Q92628 1395 aa16.26■□□□□ 0.19
APOBEC3F-202ENST00000381565 WNK3Q9BYP7 1800 aa16.26■□□□□ 0.19
APOBEC3F-202ENST00000381565 SPATA31A5Q5VU36 1347 aa16.26■□□□□ 0.19
APOBEC3F-202ENST00000381565 SPATA31A7Q8IWB4 1347 aa16.26■□□□□ 0.19
APOBEC3F-202ENST00000381565 RGPD1P0DJD0 1748 aa16.26■□□□□ 0.19
APOBEC3F-202ENST00000381565 FAM182BQ5T319 152 aa16.26■□□□□ 0.19
APOBEC3F-202ENST00000381565 PUS7Q96PZ0 661 aaKnown RBP16.26■□□□□ 0.19
APOBEC3F-202ENST00000381565 TTC21BQ7Z4L5 1316 aa16.25■□□□□ 0.19
APOBEC3F-202ENST00000381565 DISP2A7MBM2 1401 aa16.25■□□□□ 0.19
APOBEC3F-202ENST00000381565 CPDO75976 1380 aa16.25■□□□□ 0.19
APOBEC3F-202ENST00000381565 NINLQ9Y2I6 1382 aa16.25■□□□□ 0.19
APOBEC3F-202ENST00000381565 CAMTA1Q9Y6Y1 1673 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms