RNA–Protein interactions for RNA: ENST00000381158.3

RAB3C-202, Transcript of RAB3C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB3C, Length 583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3C-202ENST00000381158 GJD4Q96KN9 370 aaPredicted RBP13.2□□□□□ -0.3
RAB3C-202ENST00000381158 PSME1Q06323 249 aa13.19□□□□□ -0.3
RAB3C-202ENST00000381158 UNC5CLQ8IV45 518 aa13.19□□□□□ -0.3
RAB3C-202ENST00000381158 PMFBP1Q8TBY8 1022 aa13.19□□□□□ -0.3
RAB3C-202ENST00000381158 HIRIP3Q9BW71 556 aaPredicted RBP13.19□□□□□ -0.3
RAB3C-202ENST00000381158 MINK1Q8N4C8 1332 aaPredicted RBP13.18□□□□□ -0.3
RAB3C-202ENST00000381158 COL14A1Q05707 1796 aaKnown RBP13.18□□□□□ -0.3
RAB3C-202ENST00000381158 STAC3Q96MF2 364 aa13.18□□□□□ -0.3
RAB3C-202ENST00000381158 ARHGEF10O15013 1369 aa13.18□□□□□ -0.3
RAB3C-202ENST00000381158 EP400Q96L91 3159 aa13.18□□□□□ -0.3
RAB3C-202ENST00000381158 SPINK5Q9NQ38 1064 aaPredicted RBP13.17□□□□□ -0.3
RAB3C-202ENST00000381158 ZNF219Q9P2Y4 722 aaPredicted RBP13.17□□□□□ -0.3
RAB3C-202ENST00000381158 PHRF1Q9P1Y6 1649 aaKnown RBP13.17□□□□□ -0.3
RAB3C-202ENST00000381158 ATP7BP35670 1465 aa13.16□□□□□ -0.3
RAB3C-202ENST00000381158 WASLO00401 505 aaPredicted RBP13.16□□□□□ -0.3
RAB3C-202ENST00000381158 CAPN15O75808 1086 aa13.16□□□□□ -0.3
RAB3C-202ENST00000381158 EIF3AQ14152 1382 aaKnown RBP13.15□□□□□ -0.3
RAB3C-202ENST00000381158 FAM83GA6ND36 823 aa13.14□□□□□ -0.31
RAB3C-202ENST00000381158 PLEKHG5O94827 1062 aa13.14□□□□□ -0.31
RAB3C-202ENST00000381158 VPS72Q15906 364 aa13.14□□□□□ -0.31
RAB3C-202ENST00000381158 LMOD2Q6P5Q4 547 aa13.14□□□□□ -0.31
RAB3C-202ENST00000381158 HAP1P54257 671 aaPredicted RBP13.13□□□□□ -0.31
RAB3C-202ENST00000381158 GPRASP1Q5JY77 1395 aa13.12□□□□□ -0.31
RAB3C-202ENST00000381158 ONECUT3O60422 494 aaPredicted RBP13.12□□□□□ -0.31
RAB3C-202ENST00000381158 QRICH2Q9H0J4 1663 aa13.12□□□□□ -0.31
RAB3C-202ENST00000381158 CCDC125Q86Z20 511 aa13.11□□□□□ -0.31
RAB3C-202ENST00000381158 THSD7AQ9UPZ6 1657 aa13.11□□□□□ -0.31
RAB3C-202ENST00000381158 SEPT12Q8IYM1 358 aa13.1□□□□□ -0.31
RAB3C-202ENST00000381158 BLMP54132 1417 aaPredicted RBP13.09□□□□□ -0.31
RAB3C-202ENST00000381158 NBPF1Q3BBV0 1214 aa13.09□□□□□ -0.31
RAB3C-202ENST00000381158 NUDT16Q96DE0 195 aaKnown RBP13.09□□□□□ -0.31
RAB3C-202ENST00000381158 TRPM1Q7Z4N2 1603 aa13.09□□□□□ -0.31
RAB3C-202ENST00000381158 POLR3AO14802 1390 aaPredicted RBP13.08□□□□□ -0.31
RAB3C-202ENST00000381158 CACNB1Q02641 598 aaPredicted RBP13.08□□□□□ -0.32
RAB3C-202ENST00000381158 NGDNQ8NEJ9 315 aaKnown RBP13.08□□□□□ -0.32
RAB3C-202ENST00000381158 CDK19Q9BWU1 502 aa13.08□□□□□ -0.32
RAB3C-202ENST00000381158 BTG4Q9NY30 223 aa13.08□□□□□ -0.32
RAB3C-202ENST00000381158 RGPD1P0DJD0 1748 aa13.08□□□□□ -0.32
RAB3C-202ENST00000381158 NRKQ7Z2Y5 1582 aa13.07□□□□□ -0.32
RAB3C-202ENST00000381158 TNS1Q9HBL0 1735 aaKnown RBP13.07□□□□□ -0.32
RAB3C-202ENST00000381158 LMO7Q8WWI1 1683 aa13.06□□□□□ -0.32
RAB3C-202ENST00000381158 CCDC9Q9Y3X0 531 aaKnown RBP13.06□□□□□ -0.32
RAB3C-202ENST00000381158 PAK3O75914 559 aaPredicted RBP13.05□□□□□ -0.32
RAB3C-202ENST00000381158 KRT27Q7Z3Y8 459 aa13.05□□□□□ -0.32
RAB3C-202ENST00000381158 PLEKHG3A1L390 1219 aa13.04□□□□□ -0.32
RAB3C-202ENST00000381158 CCDC61Q9Y6R9 512 aa13.04□□□□□ -0.32
RAB3C-202ENST00000381158 ACEP12821 1306 aa13.04□□□□□ -0.32
RAB3C-202ENST00000381158 SPATA31A5Q5VU36 1347 aa13.04□□□□□ -0.32
RAB3C-202ENST00000381158 SPATA31A7Q8IWB4 1347 aa13.04□□□□□ -0.32
RAB3C-202ENST00000381158 KIAA0232Q92628 1395 aa13.04□□□□□ -0.32
RAB3C-202ENST00000381158 AKAP12Q02952 1782 aa13.04□□□□□ -0.32
RAB3C-202ENST00000381158 FAM98CQ17RN3 349 aaKnown RBP13.03□□□□□ -0.32
RAB3C-202ENST00000381158 NBPF8Q3BBV2 869 aa13.03□□□□□ -0.32
RAB3C-202ENST00000381158 DEFB132Q7Z7B7 95 aa13.03□□□□□ -0.32
RAB3C-202ENST00000381158 ZRANB1Q9UGI0 708 aa13.03□□□□□ -0.32
RAB3C-202ENST00000381158 CAMTA1Q9Y6Y1 1673 aa13.02□□□□□ -0.33
RAB3C-202ENST00000381158 CHRNA2Q15822 529 aa13.01□□□□□ -0.33
RAB3C-202ENST00000381158 NUTM2GQ5VZR2 741 aa13.01□□□□□ -0.33
RAB3C-202ENST00000381158 L3MBTL2Q969R5 705 aa13.01□□□□□ -0.33
RAB3C-202ENST00000381158 PRDM11Q9NQV5 511 aa13.01□□□□□ -0.33
RAB3C-202ENST00000381158 CENPJQ9HC77 1338 aaPredicted RBP13.01□□□□□ -0.33
RAB3C-202ENST00000381158 PPIP5K1Q6PFW1 1433 aa13.01□□□□□ -0.33
RAB3C-202ENST00000381158 PIK3C2AO00443 1686 aa13.01□□□□□ -0.33
RAB3C-202ENST00000381158 COL18A1P39060 1754 aa13□□□□□ -0.33
RAB3C-202ENST00000381158 RGPD5Q99666 1765 aa13□□□□□ -0.33
RAB3C-202ENST00000381158 USP19O94966 1318 aa13□□□□□ -0.33
RAB3C-202ENST00000381158 SPATA31A1Q5TZJ5 1347 aa13□□□□□ -0.33
RAB3C-202ENST00000381158 WNK3Q9BYP7 1800 aa12.99□□□□□ -0.33
RAB3C-202ENST00000381158 ZC3H6P61129 1189 aaKnown RBP12.99□□□□□ -0.33
RAB3C-202ENST00000381158 SIN3AQ96ST3 1273 aa12.99□□□□□ -0.33
RAB3C-202ENST00000381158 CABP2Q9NPB3 220 aa12.99□□□□□ -0.33
RAB3C-202ENST00000381158 PARP4Q9UKK3 1724 aaKnown RBP12.99□□□□□ -0.33
RAB3C-202ENST00000381158 LRP5O75197 1615 aa12.99□□□□□ -0.33
RAB3C-202ENST00000381158 A0A0G2JS52 829 aa12.98□□□□□ -0.33
RAB3C-202ENST00000381158 MYT1Q01538 1121 aa12.98□□□□□ -0.33
RAB3C-202ENST00000381158 FAM182BQ5T319 152 aa12.98□□□□□ -0.33
RAB3C-202ENST00000381158 SLIT3O75094 1523 aa12.98□□□□□ -0.33
RAB3C-202ENST00000381158 SSH2Q76I76 1423 aa12.97□□□□□ -0.33
RAB3C-202ENST00000381158 CPDO75976 1380 aa12.97□□□□□ -0.33
RAB3C-202ENST00000381158 SRPK2P78362 688 aaKnown RBP12.97□□□□□ -0.33
RAB3C-202ENST00000381158 SF3B2Q13435 895 aaKnown RBP12.97□□□□□ -0.33
RAB3C-202ENST00000381158 ABTB2Q8N961 1025 aa12.97□□□□□ -0.33
RAB3C-202ENST00000381158 SBF2Q86WG5 1849 aa12.97□□□□□ -0.33
RAB3C-202ENST00000381158 USP6P35125 1406 aa12.96□□□□□ -0.33
RAB3C-202ENST00000381158 MON2Q7Z3U7 1717 aa12.96□□□□□ -0.33
RAB3C-202ENST00000381158 BRD4O60885 1362 aaPredicted RBP12.96□□□□□ -0.33
RAB3C-202ENST00000381158 RREB1Q92766 1687 aa12.96□□□□□ -0.33
RAB3C-202ENST00000381158 STRN4Q9NRL3 753 aa12.96□□□□□ -0.33
RAB3C-202ENST00000381158 DISP2A7MBM2 1401 aa12.96□□□□□ -0.34
RAB3C-202ENST00000381158 COL5A2P05997 1499 aaPredicted RBP12.95□□□□□ -0.34
RAB3C-202ENST00000381158 NUP188Q5SRE5 1749 aa12.94□□□□□ -0.34
RAB3C-202ENST00000381158 PEAK1Q9H792 1746 aa12.94□□□□□ -0.34
RAB3C-202ENST00000381158 BAG6P46379 1132 aa12.94□□□□□ -0.34
RAB3C-202ENST00000381158 POLA2Q14181 598 aa12.94□□□□□ -0.34
RAB3C-202ENST00000381158 CABP1Q9NZU7 370 aa12.94□□□□□ -0.34
RAB3C-202ENST00000381158 USP54Q70EL1 1684 aa12.93□□□□□ -0.34
RAB3C-202ENST00000381158 LRRC37A3O60309 1634 aa12.93□□□□□ -0.34
RAB3C-202ENST00000381158 GCP02774 474 aa12.93□□□□□ -0.34
RAB3C-202ENST00000381158 LARP1Q6PKG0 1096 aaKnown RBP12.93□□□□□ -0.34
RAB3C-202ENST00000381158 BARGINQ6ZT62 677 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms