RNA–Protein interactions for RNA: ENST00000380749.9

HMGN1-204, Transcript of high mobility group nucleosome binding domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN1, Length 1,383 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-204ENST00000380749 NUDT16Q96DE0 195 aaKnown RBP24.96■■□□□ 1.59
HMGN1-204ENST00000380749 PAK3O75914 559 aaPredicted RBP24.95■■□□□ 1.59
HMGN1-204ENST00000380749 CCDC125Q86Z20 511 aa24.95■■□□□ 1.59
HMGN1-204ENST00000380749 FAM83GA6ND36 823 aa24.93■■□□□ 1.58
HMGN1-204ENST00000380749 CDK19Q9BWU1 502 aa24.93■■□□□ 1.58
HMGN1-204ENST00000380749 TRPM1Q7Z4N2 1603 aa24.91■■□□□ 1.58
HMGN1-204ENST00000380749 BLMP54132 1417 aaPredicted RBP24.91■■□□□ 1.58
HMGN1-204ENST00000380749 SEPT12Q8IYM1 358 aa24.91■■□□□ 1.58
HMGN1-204ENST00000380749 POLR3AO14802 1390 aaPredicted RBP24.9■■□□□ 1.58
HMGN1-204ENST00000380749 BTG4Q9NY30 223 aa24.9■■□□□ 1.58
HMGN1-204ENST00000380749 NBPF1Q3BBV0 1214 aa24.89■■□□□ 1.57
HMGN1-204ENST00000380749 CCDC61Q9Y6R9 512 aa24.88■■□□□ 1.57
HMGN1-204ENST00000380749 CENPJQ9HC77 1338 aaPredicted RBP24.88■■□□□ 1.57
HMGN1-204ENST00000380749 A0A0G2JS52 829 aa24.87■■□□□ 1.57
HMGN1-204ENST00000380749 MYT1Q01538 1121 aa24.87■■□□□ 1.57
HMGN1-204ENST00000380749 NRKQ7Z2Y5 1582 aa24.86■■□□□ 1.57
HMGN1-204ENST00000380749 PRDM11Q9NQV5 511 aa24.86■■□□□ 1.57
HMGN1-204ENST00000380749 ONECUT3O60422 494 aaPredicted RBP24.85■■□□□ 1.57
HMGN1-204ENST00000380749 ACEP12821 1306 aa24.85■■□□□ 1.57
HMGN1-204ENST00000380749 THSD7AQ9UPZ6 1657 aa24.85■■□□□ 1.57
HMGN1-204ENST00000380749 RGPD1P0DJD0 1748 aa24.84■■□□□ 1.57
HMGN1-204ENST00000380749 KRT27Q7Z3Y8 459 aa24.83■■□□□ 1.57
HMGN1-204ENST00000380749 PPIP5K1Q6PFW1 1433 aa24.83■■□□□ 1.57
HMGN1-204ENST00000380749 KIAA0232Q92628 1395 aa24.82■■□□□ 1.56
HMGN1-204ENST00000380749 PLEKHG3A1L390 1219 aa24.82■■□□□ 1.56
HMGN1-204ENST00000380749 SRPK2P78362 688 aaKnown RBP24.82■■□□□ 1.56
HMGN1-204ENST00000380749 ZRANB1Q9UGI0 708 aa24.82■■□□□ 1.56
HMGN1-204ENST00000380749 SF3B2Q13435 895 aaKnown RBP24.81■■□□□ 1.56
HMGN1-204ENST00000380749 FAM98CQ17RN3 349 aaKnown RBP24.81■■□□□ 1.56
HMGN1-204ENST00000380749 NBPF8Q3BBV2 869 aa24.81■■□□□ 1.56
HMGN1-204ENST00000380749 L3MBTL2Q969R5 705 aa24.8■■□□□ 1.56
HMGN1-204ENST00000380749 SPATA31A5Q5VU36 1347 aa24.8■■□□□ 1.56
HMGN1-204ENST00000380749 SPATA31A7Q8IWB4 1347 aa24.8■■□□□ 1.56
HMGN1-204ENST00000380749 NUTM2GQ5VZR2 741 aa24.78■■□□□ 1.56
HMGN1-204ENST00000380749 LMO7Q8WWI1 1683 aa24.77■■□□□ 1.56
HMGN1-204ENST00000380749 BRD4O60885 1362 aaPredicted RBP24.76■■□□□ 1.55
HMGN1-204ENST00000380749 ABTB2Q8N961 1025 aa24.76■■□□□ 1.55
HMGN1-204ENST00000380749 AKAP12Q02952 1782 aa24.76■■□□□ 1.55
HMGN1-204ENST00000380749 CABP2Q9NPB3 220 aa24.75■■□□□ 1.55
HMGN1-204ENST00000380749 ROCK2O75116 1388 aaKnown RBP24.75■■□□□ 1.55
HMGN1-204ENST00000380749 TNS1Q9HBL0 1735 aaKnown RBP24.74■■□□□ 1.55
HMGN1-204ENST00000380749 ZC3H6P61129 1189 aaKnown RBP24.74■■□□□ 1.55
HMGN1-204ENST00000380749 CHRNA2Q15822 529 aa24.74■■□□□ 1.55
HMGN1-204ENST00000380749 SIN3AQ96ST3 1273 aa24.74■■□□□ 1.55
HMGN1-204ENST00000380749 USP19O94966 1318 aa24.73■■□□□ 1.55
HMGN1-204ENST00000380749 NEUROD1Q13562 356 aa24.72■■□□□ 1.55
HMGN1-204ENST00000380749 DEFB132Q7Z7B7 95 aa24.72■■□□□ 1.55
HMGN1-204ENST00000380749 STRN4Q9NRL3 753 aa24.72■■□□□ 1.55
HMGN1-204ENST00000380749 CPDO75976 1380 aa24.72■■□□□ 1.55
HMGN1-204ENST00000380749 SPATA31A1Q5TZJ5 1347 aa24.72■■□□□ 1.55
HMGN1-204ENST00000380749 USP6P35125 1406 aa24.72■■□□□ 1.55
HMGN1-204ENST00000380749 PIK3C2AO00443 1686 aa24.71■■□□□ 1.55
HMGN1-204ENST00000380749 SSH2Q76I76 1423 aa24.71■■□□□ 1.55
HMGN1-204ENST00000380749 EVC2Q86UK5 1308 aa24.71■■□□□ 1.55
HMGN1-204ENST00000380749 NLRP13Q86W25 1043 aa24.7■■□□□ 1.55
HMGN1-204ENST00000380749 CAMTA1Q9Y6Y1 1673 aa24.7■■□□□ 1.54
HMGN1-204ENST00000380749 SLIT3O75094 1523 aa24.68■■□□□ 1.54
HMGN1-204ENST00000380749 BAG6P46379 1132 aa24.67■■□□□ 1.54
HMGN1-204ENST00000380749 EVA1CP58658 441 aa24.67■■□□□ 1.54
HMGN1-204ENST00000380749 CABP1Q9NZU7 370 aa24.67■■□□□ 1.54
HMGN1-204ENST00000380749 PARP4Q9UKK3 1724 aaKnown RBP24.65■■□□□ 1.54
HMGN1-204ENST00000380749 MON2Q7Z3U7 1717 aa24.65■■□□□ 1.54
HMGN1-204ENST00000380749 WNK3Q9BYP7 1800 aa24.64■■□□□ 1.54
HMGN1-204ENST00000380749 GCP02774 474 aa24.64■■□□□ 1.53
HMGN1-204ENST00000380749 COL5A2P05997 1499 aaPredicted RBP24.63■■□□□ 1.53
HMGN1-204ENST00000380749 USP35Q9P2H5 1018 aa24.63■■□□□ 1.53
HMGN1-204ENST00000380749 FAM182BQ5T319 152 aa24.62■■□□□ 1.53
HMGN1-204ENST00000380749 DISP2A7MBM2 1401 aa24.62■■□□□ 1.53
HMGN1-204ENST00000380749 RGPD5Q99666 1765 aa24.61■■□□□ 1.53
HMGN1-204ENST00000380749 NLRP6P59044 892 aa24.61■■□□□ 1.53
HMGN1-204ENST00000380749 LRP5O75197 1615 aa24.61■■□□□ 1.53
HMGN1-204ENST00000380749 COL18A1P39060 1754 aa24.6■■□□□ 1.53
HMGN1-204ENST00000380749 BARGINQ6ZT62 677 aa24.6■■□□□ 1.53
HMGN1-204ENST00000380749 LARP1Q6PKG0 1096 aaKnown RBP24.59■■□□□ 1.53
HMGN1-204ENST00000380749 SBNO2Q9Y2G9 1366 aa24.59■■□□□ 1.53
HMGN1-204ENST00000380749 TCP11L2Q8N4U5 519 aa24.58■■□□□ 1.53
HMGN1-204ENST00000380749 FAM196AQ6ZSG2 479 aa24.57■■□□□ 1.52
HMGN1-204ENST00000380749 CRB1P82279 1406 aa24.57■■□□□ 1.52
HMGN1-204ENST00000380749 TONSLQ96HA7 1378 aa24.57■■□□□ 1.52
HMGN1-204ENST00000380749 ZBTB7CA1YPR0 619 aa24.56■■□□□ 1.52
HMGN1-204ENST00000380749 THRAP3Q9Y2W1 955 aaKnown RBP24.56■■□□□ 1.52
HMGN1-204ENST00000380749 AATKQ6ZMQ8 1374 aa24.56■■□□□ 1.52
HMGN1-204ENST00000380749 PDE3BQ13370 1112 aa24.55■■□□□ 1.52
HMGN1-204ENST00000380749 ZNF692Q9BU19 519 aaPredicted RBP24.55■■□□□ 1.52
HMGN1-204ENST00000380749 USP54Q70EL1 1684 aa24.55■■□□□ 1.52
HMGN1-204ENST00000380749 LRRC37A3O60309 1634 aa24.55■■□□□ 1.52
HMGN1-204ENST00000380749 EN1Q05925 392 aaPredicted RBP24.54■■□□□ 1.52
HMGN1-204ENST00000380749 RREB1Q92766 1687 aa24.54■■□□□ 1.52
HMGN1-204ENST00000380749 TTC21AQ8NDW8 1320 aa24.54■■□□□ 1.52
HMGN1-204ENST00000380749 CARD11Q9BXL7 1154 aa24.54■■□□□ 1.52
HMGN1-204ENST00000380749 CPSF1Q10570 1443 aaKnown RBP24.53■■□□□ 1.52
HMGN1-204ENST00000380749 SBF2Q86WG5 1849 aa24.53■■□□□ 1.52
HMGN1-204ENST00000380749 TTC21BQ7Z4L5 1316 aa24.53■■□□□ 1.52
HMGN1-204ENST00000380749 KTN1Q86UP2 1357 aaKnown RBP24.52■■□□□ 1.52
HMGN1-204ENST00000380749 LTN1O94822 1766 aa24.52■■□□□ 1.52
HMGN1-204ENST00000380749 TRIM37O94972 964 aa24.51■■□□□ 1.51
HMGN1-204ENST00000380749 NUP188Q5SRE5 1749 aa24.5■■□□□ 1.51
HMGN1-204ENST00000380749 KCNH5Q8NCM2 988 aa24.5■■□□□ 1.51
HMGN1-204ENST00000380749 NFAT5O94916 1531 aa24.5■■□□□ 1.51
HMGN1-204ENST00000380749 ABCC6O95255 1503 aa24.5■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms