RNA–Protein interactions for RNA: ENST00000380265.9

HERC6-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HERC6, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-203ENST00000380265 FOXD4L3Q6VB84 417 aaPredicted RBP15□□□□□ -0.01
HERC6-203ENST00000380265 KIF16BQ96L93 1317 aa15□□□□□ -0.01
HERC6-203ENST00000380265 LAMC1P11047 1609 aa15□□□□□ -0.01
HERC6-203ENST00000380265 SYCE3A1L190 88 aa15□□□□□ -0.01
HERC6-203ENST00000380265 CSPP1Q1MSJ5 1256 aa15□□□□□ -0.01
HERC6-203ENST00000380265 CCDC27Q2M243 656 aa14.99□□□□□ -0.01
HERC6-203ENST00000380265 KIF2CQ99661 725 aa14.99□□□□□ -0.01
HERC6-203ENST00000380265 NOL7Q9UMY1 257 aaKnown RBP14.99□□□□□ -0.01
HERC6-203ENST00000380265 CDC45O75419 566 aa14.99□□□□□ -0.01
HERC6-203ENST00000380265 PKP1Q13835 747 aa14.99□□□□□ -0.01
HERC6-203ENST00000380265 TMPOP42166 694 aaKnown RBP14.99□□□□□ -0.01
HERC6-203ENST00000380265 TMEM132EQ6IEE7 984 aa14.99□□□□□ -0.01
HERC6-203ENST00000380265 CHAMP1Q96JM3 812 aa14.99□□□□□ -0.01
HERC6-203ENST00000380265 NCOA3Q9Y6Q9 1424 aa14.99□□□□□ -0.01
HERC6-203ENST00000380265 CT47B1P0C2W7 299 aaPredicted RBP14.98□□□□□ -0.01
HERC6-203ENST00000380265 ZKSCAN5Q9Y2L8 839 aa14.98□□□□□ -0.01
HERC6-203ENST00000380265 KIF3BO15066 747 aa14.97□□□□□ -0.01
HERC6-203ENST00000380265 NOL8Q76FK4 1167 aaKnown RBP14.97□□□□□ -0.01
HERC6-203ENST00000380265 STAC3Q96MF2 364 aa14.97□□□□□ -0.01
HERC6-203ENST00000380265 PHF23Q9BUL5 403 aaPredicted RBP14.97□□□□□ -0.01
HERC6-203ENST00000380265 MYO5CQ9NQX4 1742 aa14.97□□□□□ -0.01
HERC6-203ENST00000380265 IFT140Q96RY7 1462 aa14.97□□□□□ -0.01
HERC6-203ENST00000380265 MRC2Q9UBG0 1479 aa14.97□□□□□ -0.01
HERC6-203ENST00000380265 PLCB2Q00722 1185 aa14.97□□□□□ -0.01
HERC6-203ENST00000380265 CCDC39Q9UFE4 941 aa14.97□□□□□ -0.01
HERC6-203ENST00000380265 ARHGEF5Q12774 1597 aa14.96□□□□□ -0.01
HERC6-203ENST00000380265 ZNF445P59923 1031 aa14.96□□□□□ -0.01
HERC6-203ENST00000380265 RABEP1Q15276 862 aa14.96□□□□□ -0.01
HERC6-203ENST00000380265 PLXNC1O60486 1568 aa14.96□□□□□ -0.01
HERC6-203ENST00000380265 SPAG9O60271 1321 aaKnown RBP14.96□□□□□ -0.02
HERC6-203ENST00000380265 GGNBP2Q9H3C7 697 aa14.96□□□□□ -0.02
HERC6-203ENST00000380265 SAMD9LQ8IVG5 1584 aa14.95□□□□□ -0.02
HERC6-203ENST00000380265 TERF1P54274 439 aa14.95□□□□□ -0.02
HERC6-203ENST00000380265 AFAP1Q8N556 730 aa14.95□□□□□ -0.02
HERC6-203ENST00000380265 LMBRD1Q9NUN5 540 aa14.95□□□□□ -0.02
HERC6-203ENST00000380265 NUTM2DQ5VT03 806 aaPredicted RBP14.95□□□□□ -0.02
HERC6-203ENST00000380265 SASS6Q6UVJ0 657 aa14.95□□□□□ -0.02
HERC6-203ENST00000380265 MTERF4Q7Z6M4 381 aaKnown RBP14.95□□□□□ -0.02
HERC6-203ENST00000380265 DYNC1I1O14576 645 aa14.95□□□□□ -0.02
HERC6-203ENST00000380265 ST18O60284 1047 aa14.95□□□□□ -0.02
HERC6-203ENST00000380265 EFCAB2Q5VUJ9 269 aa14.95□□□□□ -0.02
HERC6-203ENST00000380265 ZGPATQ8N5A5 531 aaKnown RBP14.95□□□□□ -0.02
HERC6-203ENST00000380265 GCC1Q96CN9 775 aa14.95□□□□□ -0.02
HERC6-203ENST00000380265 ERVK-7P63135 1459 aa14.95□□□□□ -0.02
HERC6-203ENST00000380265 ZNF500O60304 480 aaPredicted RBP14.94□□□□□ -0.02
HERC6-203ENST00000380265 HS1BP3Q53T59 392 aa14.94□□□□□ -0.02
HERC6-203ENST00000380265 PRDM4Q9UKN5 801 aa14.94□□□□□ -0.02
HERC6-203ENST00000380265 TSC1Q92574 1164 aa14.94□□□□□ -0.02
HERC6-203ENST00000380265 CASC1Q6TDU7 716 aa14.93□□□□□ -0.02
HERC6-203ENST00000380265 CHMP4BQ9H444 224 aaKnown RBP14.92□□□□□ -0.02
HERC6-203ENST00000380265 KDM5AP29375 1690 aaKnown RBP14.92□□□□□ -0.02
HERC6-203ENST00000380265 KIAA2012Q0VF49 1180 aa14.92□□□□□ -0.02
HERC6-203ENST00000380265 KANK1Q14678 1352 aa14.92□□□□□ -0.02
HERC6-203ENST00000380265 CABP2Q9NPB3 220 aa14.92□□□□□ -0.02
HERC6-203ENST00000380265 TRIM35Q9UPQ4 493 aa14.91□□□□□ -0.02
HERC6-203ENST00000380265 FAM177BA6PVY3 158 aa14.91□□□□□ -0.02
HERC6-203ENST00000380265 CBX1P83916 185 aa14.91□□□□□ -0.02
HERC6-203ENST00000380265 GPT2Q8TD30 523 aa14.91□□□□□ -0.02
HERC6-203ENST00000380265 JARID2Q92833 1246 aaPredicted RBP14.91□□□□□ -0.02
HERC6-203ENST00000380265 SRPK2P78362 688 aaKnown RBP14.9□□□□□ -0.02
HERC6-203ENST00000380265 ZNF830Q96NB3 372 aaPredicted RBP14.9□□□□□ -0.02
HERC6-203ENST00000380265 THUMPD2Q9BTF0 503 aaKnown RBP14.9□□□□□ -0.02
HERC6-203ENST00000380265 TMEM63CQ9P1W3 806 aa14.9□□□□□ -0.02
HERC6-203ENST00000380265 LRSAM1Q6UWE0 723 aa14.9□□□□□ -0.02
HERC6-203ENST00000380265 SMAP1Q8IYB5 467 aaPredicted RBP14.9□□□□□ -0.02
HERC6-203ENST00000380265 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.9□□□□□ -0.02
HERC6-203ENST00000380265 IBTKQ9P2D0 1353 aaPredicted RBP14.9□□□□□ -0.02
HERC6-203ENST00000380265 MADDQ8WXG6 1647 aa14.89□□□□□ -0.03
HERC6-203ENST00000380265 ABCA8O94911 1581 aa14.89□□□□□ -0.03
HERC6-203ENST00000380265 MAST1Q9Y2H9 1570 aa14.89□□□□□ -0.03
HERC6-203ENST00000380265 INTS3Q68E01 1043 aaKnown RBP14.88□□□□□ -0.03
HERC6-203ENST00000380265 C16orf71Q8IYS4 520 aaPredicted RBP14.88□□□□□ -0.03
HERC6-203ENST00000380265 RNF17Q9BXT8 1623 aaKnown RBP14.88□□□□□ -0.03
HERC6-203ENST00000380265 DUOX2Q9NRD8 1548 aa14.88□□□□□ -0.03
HERC6-203ENST00000380265 CWC22Q9HCG8 908 aaKnown RBP14.88□□□□□ -0.03
HERC6-203ENST00000380265 NSFL1CQ9UNZ2 370 aaKnown RBP14.88□□□□□ -0.03
HERC6-203ENST00000380265 ATP10AO60312 1499 aa14.88□□□□□ -0.03
HERC6-203ENST00000380265 PDLIM2Q96JY6 352 aa14.88□□□□□ -0.03
HERC6-203ENST00000380265 STK26Q9P289 416 aa14.88□□□□□ -0.03
HERC6-203ENST00000380265 PTPRTO14522 1441 aa14.88□□□□□ -0.03
HERC6-203ENST00000380265 UNC13BO14795 1591 aa14.88□□□□□ -0.03
HERC6-203ENST00000380265 TSPY26PQ9H489 355 aa14.87□□□□□ -0.03
HERC6-203ENST00000380265 ZBTB7BO15156 539 aaPredicted RBP14.87□□□□□ -0.03
HERC6-203ENST00000380265 MCM5P33992 734 aa14.87□□□□□ -0.03
HERC6-203ENST00000380265 AK9Q5TCS8 1911 aa14.87□□□□□ -0.03
HERC6-203ENST00000380265 ABCC11Q96J66 1382 aa14.87□□□□□ -0.03
HERC6-203ENST00000380265 IQGAP1P46940 1657 aa14.87□□□□□ -0.03
HERC6-203ENST00000380265 DIAPH1O60610 1272 aaKnown RBP14.86□□□□□ -0.03
HERC6-203ENST00000380265 GSPT1P15170 499 aaKnown RBP14.86□□□□□ -0.03
HERC6-203ENST00000380265 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.86□□□□□ -0.03
HERC6-203ENST00000380265 IQGAP3Q86VI3 1631 aa14.86□□□□□ -0.03
HERC6-203ENST00000380265 NEK4P51957 841 aa14.86□□□□□ -0.03
HERC6-203ENST00000380265 GDPD2Q9HCC8 539 aa14.86□□□□□ -0.03
HERC6-203ENST00000380265 IQSEC2Q5JU85 1478 aa14.86□□□□□ -0.03
HERC6-203ENST00000380265 SYAP1Q96A49 352 aaPredicted RBP14.86□□□□□ -0.03
HERC6-203ENST00000380265 CCDC94Q9BW85 323 aaPredicted RBP14.86□□□□□ -0.03
HERC6-203ENST00000380265 ZNF518AQ6AHZ1 1483 aa14.85□□□□□ -0.03
HERC6-203ENST00000380265 MBD3O95983 291 aa14.85□□□□□ -0.03
HERC6-203ENST00000380265 CLEC17AQ6ZS10 378 aa14.85□□□□□ -0.03
HERC6-203ENST00000380265 C17orf53Q8N3J3 647 aaPredicted RBP14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms