RNA–Protein interactions for RNA: ENST00000379995.1

C9orf72-201, Transcript of chromosome 9 open reading frame 72, humanhuman

TSL 3

Gene C9orf72, Length 777 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72-201ENST00000379995 MYT1Q01538 1121 aa13.76□□□□□ -0.21
C9orf72-201ENST00000379995 FAM98CQ17RN3 349 aaKnown RBP13.76□□□□□ -0.21
C9orf72-201ENST00000379995 EP400Q96L91 3159 aa13.76□□□□□ -0.21
C9orf72-201ENST00000379995 ATP7BP35670 1465 aa13.75□□□□□ -0.21
C9orf72-201ENST00000379995 DEFB132Q7Z7B7 95 aa13.75□□□□□ -0.21
C9orf72-201ENST00000379995 PRDM11Q9NQV5 511 aa13.75□□□□□ -0.21
C9orf72-201ENST00000379995 CCDC61Q9Y6R9 512 aa13.75□□□□□ -0.21
C9orf72-201ENST00000379995 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.75□□□□□ -0.21
C9orf72-201ENST00000379995 MARF1Q9Y4F3 1742 aaKnown RBP13.75□□□□□ -0.21
C9orf72-201ENST00000379995 SF3B2Q13435 895 aaKnown RBP13.74□□□□□ -0.21
C9orf72-201ENST00000379995 NBPF8Q3BBV2 869 aa13.74□□□□□ -0.21
C9orf72-201ENST00000379995 RGPD8O14715 1765 aaPredicted RBP13.73□□□□□ -0.21
C9orf72-201ENST00000379995 ACEP12821 1306 aa13.73□□□□□ -0.21
C9orf72-201ENST00000379995 PLEKHG3A1L390 1219 aa13.73□□□□□ -0.21
C9orf72-201ENST00000379995 NUTM2GQ5VZR2 741 aa13.73□□□□□ -0.21
C9orf72-201ENST00000379995 SPATA31A5Q5VU36 1347 aa13.72□□□□□ -0.21
C9orf72-201ENST00000379995 SPATA31A7Q8IWB4 1347 aa13.72□□□□□ -0.21
C9orf72-201ENST00000379995 HOXD11P31277 338 aaPredicted RBP13.72□□□□□ -0.21
C9orf72-201ENST00000379995 POLR3AO14802 1390 aaPredicted RBP13.71□□□□□ -0.21
C9orf72-201ENST00000379995 KIAA0232Q92628 1395 aa13.71□□□□□ -0.21
C9orf72-201ENST00000379995 TRPM3Q9HCF6 1732 aaPredicted RBP13.71□□□□□ -0.21
C9orf72-201ENST00000379995 ZC3H6P61129 1189 aaKnown RBP13.71□□□□□ -0.21
C9orf72-201ENST00000379995 CHRNA2Q15822 529 aa13.71□□□□□ -0.21
C9orf72-201ENST00000379995 SRPK2P78362 688 aaKnown RBP13.7□□□□□ -0.22
C9orf72-201ENST00000379995 CENPJQ9HC77 1338 aaPredicted RBP13.69□□□□□ -0.22
C9orf72-201ENST00000379995 NCBP3Q53F19 620 aaKnown RBP13.69□□□□□ -0.22
C9orf72-201ENST00000379995 ABTB2Q8N961 1025 aa13.69□□□□□ -0.22
C9orf72-201ENST00000379995 L3MBTL2Q969R5 705 aa13.69□□□□□ -0.22
C9orf72-201ENST00000379995 CABP2Q9NPB3 220 aa13.69□□□□□ -0.22
C9orf72-201ENST00000379995 STRN4Q9NRL3 753 aa13.69□□□□□ -0.22
C9orf72-201ENST00000379995 ABCA3Q99758 1704 aa13.68□□□□□ -0.22
C9orf72-201ENST00000379995 NWD2Q9ULI1 1742 aa13.68□□□□□ -0.22
C9orf72-201ENST00000379995 FAM182BQ5T319 152 aa13.68□□□□□ -0.22
C9orf72-201ENST00000379995 RNF216Q9NWF9 866 aaPredicted RBP13.68□□□□□ -0.22
C9orf72-201ENST00000379995 PLCH1Q4KWH8 1693 aa13.68□□□□□ -0.22
C9orf72-201ENST00000379995 ALS2Q96Q42 1657 aa13.68□□□□□ -0.22
C9orf72-201ENST00000379995 SPATA31A1Q5TZJ5 1347 aa13.67□□□□□ -0.22
C9orf72-201ENST00000379995 BAG6P46379 1132 aa13.67□□□□□ -0.22
C9orf72-201ENST00000379995 SIN3AQ96ST3 1273 aa13.67□□□□□ -0.22
C9orf72-201ENST00000379995 ARHGEF28Q8N1W1 1705 aaKnown RBP13.67□□□□□ -0.22
C9orf72-201ENST00000379995 EVA1CP58658 441 aa13.66□□□□□ -0.22
C9orf72-201ENST00000379995 COL14A1Q05707 1796 aaKnown RBP13.66□□□□□ -0.22
C9orf72-201ENST00000379995 PPIP5K1Q6PFW1 1433 aa13.65□□□□□ -0.22
C9orf72-201ENST00000379995 NLRP13Q86W25 1043 aa13.65□□□□□ -0.22
C9orf72-201ENST00000379995 CABP1Q9NZU7 370 aa13.65□□□□□ -0.22
C9orf72-201ENST00000379995 USP35Q9P2H5 1018 aa13.65□□□□□ -0.22
C9orf72-201ENST00000379995 USP19O94966 1318 aa13.64□□□□□ -0.23
C9orf72-201ENST00000379995 GCP02774 474 aa13.64□□□□□ -0.23
C9orf72-201ENST00000379995 EN1Q05925 392 aaPredicted RBP13.64□□□□□ -0.23
C9orf72-201ENST00000379995 NEUROD1Q13562 356 aa13.64□□□□□ -0.23
C9orf72-201ENST00000379995 NRAPQ86VF7 1730 aa13.64□□□□□ -0.23
C9orf72-201ENST00000379995 LARP1Q6PKG0 1096 aaKnown RBP13.63□□□□□ -0.23
C9orf72-201ENST00000379995 CPDO75976 1380 aa13.62□□□□□ -0.23
C9orf72-201ENST00000379995 BARGINQ6ZT62 677 aa13.62□□□□□ -0.23
C9orf72-201ENST00000379995 SSH2Q76I76 1423 aa13.62□□□□□ -0.23
C9orf72-201ENST00000379995 KIAA1210Q9ULL0 1709 aa13.61□□□□□ -0.23
C9orf72-201ENST00000379995 BRD4O60885 1362 aaPredicted RBP13.61□□□□□ -0.23
C9orf72-201ENST00000379995 PSDA5PKW4 1024 aaPredicted RBP13.61□□□□□ -0.23
C9orf72-201ENST00000379995 FAM196AQ6ZSG2 479 aa13.61□□□□□ -0.23
C9orf72-201ENST00000379995 TCP11L2Q8N4U5 519 aa13.61□□□□□ -0.23
C9orf72-201ENST00000379995 BRWD3Q6RI45 1802 aa13.61□□□□□ -0.23
C9orf72-201ENST00000379995 EVC2Q86UK5 1308 aa13.61□□□□□ -0.23
C9orf72-201ENST00000379995 TRIM37O94972 964 aa13.6□□□□□ -0.23
C9orf72-201ENST00000379995 NLRP6P59044 892 aa13.6□□□□□ -0.23
C9orf72-201ENST00000379995 PDE3BQ13370 1112 aa13.6□□□□□ -0.23
C9orf72-201ENST00000379995 ROCK2O75116 1388 aaKnown RBP13.59□□□□□ -0.23
C9orf72-201ENST00000379995 ITSN1Q15811 1721 aa13.59□□□□□ -0.23
C9orf72-201ENST00000379995 CRYBG1Q9Y4K1 1723 aa13.59□□□□□ -0.23
C9orf72-201ENST00000379995 USP6P35125 1406 aa13.59□□□□□ -0.23
C9orf72-201ENST00000379995 ZBTB7CA1YPR0 619 aa13.59□□□□□ -0.23
C9orf72-201ENST00000379995 DCAF8L1A6NGE4 600 aa13.59□□□□□ -0.23
C9orf72-201ENST00000379995 EZH2Q15910 746 aaKnown RBP13.59□□□□□ -0.23
C9orf72-201ENST00000379995 TOPAZ1Q8N9V7 1692 aa13.59□□□□□ -0.23
C9orf72-201ENST00000379995 CAMTA1Q9Y6Y1 1673 aa13.59□□□□□ -0.23
C9orf72-201ENST00000379995 THSD7AQ9UPZ6 1657 aa13.58□□□□□ -0.24
C9orf72-201ENST00000379995 DISP2A7MBM2 1401 aa13.57□□□□□ -0.24
C9orf72-201ENST00000379995 APBA3O96018 575 aa13.57□□□□□ -0.24
C9orf72-201ENST00000379995 CAMKK2Q96RR4 588 aa13.57□□□□□ -0.24
C9orf72-201ENST00000379995 THRAP3Q9Y2W1 955 aaKnown RBP13.57□□□□□ -0.24
C9orf72-201ENST00000379995 NRKQ7Z2Y5 1582 aa13.57□□□□□ -0.24
C9orf72-201ENST00000379995 PHRF1Q9P1Y6 1649 aaKnown RBP13.57□□□□□ -0.24
C9orf72-201ENST00000379995 R3HDM1Q15032 1099 aaKnown RBP13.56□□□□□ -0.24
C9orf72-201ENST00000379995 ZNF692Q9BU19 519 aaPredicted RBP13.56□□□□□ -0.24
C9orf72-201ENST00000379995 TTC21BQ7Z4L5 1316 aa13.55□□□□□ -0.24
C9orf72-201ENST00000379995 AATKQ6ZMQ8 1374 aa13.55□□□□□ -0.24
C9orf72-201ENST00000379995 COL5A2P05997 1499 aaPredicted RBP13.55□□□□□ -0.24
C9orf72-201ENST00000379995 TOM1L2Q6ZVM7 507 aa13.53□□□□□ -0.24
C9orf72-201ENST00000379995 AXIN2Q9Y2T1 843 aa13.53□□□□□ -0.24
C9orf72-201ENST00000379995 CRB1P82279 1406 aa13.53□□□□□ -0.24
C9orf72-201ENST00000379995 SOX12O15370 315 aa13.52□□□□□ -0.25
C9orf72-201ENST00000379995 ARHGEF25Q86VW2 580 aa13.52□□□□□ -0.25
C9orf72-201ENST00000379995 KCNH5Q8NCM2 988 aa13.52□□□□□ -0.25
C9orf72-201ENST00000379995 LMO7Q8WWI1 1683 aa13.51□□□□□ -0.25
C9orf72-201ENST00000379995 SLIT3O75094 1523 aa13.51□□□□□ -0.25
C9orf72-201ENST00000379995 PARD3Q8TEW0 1356 aa13.51□□□□□ -0.25
C9orf72-201ENST00000379995 TTC21AQ8NDW8 1320 aa13.51□□□□□ -0.25
C9orf72-201ENST00000379995 CARD11Q9BXL7 1154 aa13.51□□□□□ -0.25
C9orf72-201ENST00000379995 QRICH2Q9H0J4 1663 aa13.5□□□□□ -0.25
C9orf72-201ENST00000379995 WDR17Q8IZU2 1322 aa13.5□□□□□ -0.25
C9orf72-201ENST00000379995 DDB1Q16531 1140 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms