RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 MINK1Q8N4C8 1332 aaPredicted RBP13.78□□□□□ -0.2
POLR2J3-201ENST00000379340 SAFB2Q14151 953 aaKnown RBP eCLIP13.78□□□□□ -0.2
POLR2J3-201ENST00000379340 NCBP3Q53F19 620 aaKnown RBP13.78□□□□□ -0.2
POLR2J3-201ENST00000379340 B4GALNT3Q6L9W6 998 aa13.78□□□□□ -0.2
POLR2J3-201ENST00000379340 HDGFL2Q7Z4V5 671 aaPredicted RBP13.78□□□□□ -0.2
POLR2J3-201ENST00000379340 CD163L1Q9NR16 1453 aa13.77□□□□□ -0.2
POLR2J3-201ENST00000379340 MEX3CQ5U5Q3 659 aaKnown RBP13.77□□□□□ -0.21
POLR2J3-201ENST00000379340 DUSP27Q5VZP5 1158 aa13.76□□□□□ -0.21
POLR2J3-201ENST00000379340 CCDC136Q96JN2 1154 aa13.76□□□□□ -0.21
POLR2J3-201ENST00000379340 CDK19Q9BWU1 502 aa13.76□□□□□ -0.21
POLR2J3-201ENST00000379340 SPATA31A6Q5VVP1 1343 aa13.76□□□□□ -0.21
POLR2J3-201ENST00000379340 SLFN5Q08AF3 891 aa13.75□□□□□ -0.21
POLR2J3-201ENST00000379340 ZNF772Q68DY9 489 aaPredicted RBP13.75□□□□□ -0.21
POLR2J3-201ENST00000379340 CHD2O14647 1828 aaKnown RBP13.75□□□□□ -0.21
POLR2J3-201ENST00000379340 TRMT2AQ8IZ69 625 aaKnown RBP13.75□□□□□ -0.21
POLR2J3-201ENST00000379340 E9PSI1 815 aa13.74□□□□□ -0.21
POLR2J3-201ENST00000379340 APAF1O14727 1248 aa13.74□□□□□ -0.21
POLR2J3-201ENST00000379340 RXRBP28702 533 aa13.74□□□□□ -0.21
POLR2J3-201ENST00000379340 CCDC146Q8IYE0 955 aa13.74□□□□□ -0.21
POLR2J3-201ENST00000379340 RUNDC1Q96C34 613 aa13.74□□□□□ -0.21
POLR2J3-201ENST00000379340 MTHFSP49914 203 aa13.73□□□□□ -0.21
POLR2J3-201ENST00000379340 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.73□□□□□ -0.21
POLR2J3-201ENST00000379340 PLEKHG1Q9ULL1 1385 aa13.73□□□□□ -0.21
POLR2J3-201ENST00000379340 AHDC1Q5TGY3 1603 aaPredicted RBP13.73□□□□□ -0.21
POLR2J3-201ENST00000379340 ADGRB2O60241 1585 aa13.72□□□□□ -0.21
POLR2J3-201ENST00000379340 DIP2AQ14689 1571 aa13.72□□□□□ -0.21
POLR2J3-201ENST00000379340 NUTM2BA6NNL0 878 aaPredicted RBP13.72□□□□□ -0.21
POLR2J3-201ENST00000379340 NUTM2EB1AL46 878 aaPredicted RBP13.72□□□□□ -0.21
POLR2J3-201ENST00000379340 NUTM2AQ8IVF1 878 aaPredicted RBP13.72□□□□□ -0.21
POLR2J3-201ENST00000379340 METP08581 1390 aa13.71□□□□□ -0.21
POLR2J3-201ENST00000379340 RBM19Q9Y4C8 960 aaKnown RBP13.71□□□□□ -0.21
POLR2J3-201ENST00000379340 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.71□□□□□ -0.22
POLR2J3-201ENST00000379340 TNNT2P45379 298 aaPredicted RBP13.71□□□□□ -0.22
POLR2J3-201ENST00000379340 CCDC27Q2M243 656 aa13.71□□□□□ -0.22
POLR2J3-201ENST00000379340 COL3A1P02461 1466 aaPredicted RBP13.7□□□□□ -0.22
POLR2J3-201ENST00000379340 WASLO00401 505 aaPredicted RBP13.7□□□□□ -0.22
POLR2J3-201ENST00000379340 CDC42BPGQ6DT37 1551 aa13.7□□□□□ -0.22
POLR2J3-201ENST00000379340 AFF2P51816 1311 aa13.69□□□□□ -0.22
POLR2J3-201ENST00000379340 CDK12Q9NYV4 1490 aaPredicted RBP13.69□□□□□ -0.22
POLR2J3-201ENST00000379340 MON2Q7Z3U7 1717 aa13.69□□□□□ -0.22
POLR2J3-201ENST00000379340 RGS12O14924 1447 aa13.69□□□□□ -0.22
POLR2J3-201ENST00000379340 EDC4Q6P2E9 1401 aaKnown RBP13.69□□□□□ -0.22
POLR2J3-201ENST00000379340 ADAMTS13Q76LX8 1427 aa13.69□□□□□ -0.22
POLR2J3-201ENST00000379340 FYB1O15117 783 aa13.69□□□□□ -0.22
POLR2J3-201ENST00000379340 C14orf37Q86TY3 774 aa13.69□□□□□ -0.22
POLR2J3-201ENST00000379340 EXOC6Q8TAG9 804 aa13.69□□□□□ -0.22
POLR2J3-201ENST00000379340 ITSN1Q15811 1721 aa13.68□□□□□ -0.22
POLR2J3-201ENST00000379340 AKAP12Q02952 1782 aa13.68□□□□□ -0.22
POLR2J3-201ENST00000379340 CPSF1Q10570 1443 aaKnown RBP13.68□□□□□ -0.22
POLR2J3-201ENST00000379340 BRINP3Q76B58 766 aa13.68□□□□□ -0.22
POLR2J3-201ENST00000379340 WAPLQ7Z5K2 1190 aa13.68□□□□□ -0.22
POLR2J3-201ENST00000379340 WDR63Q8IWG1 891 aa13.68□□□□□ -0.22
POLR2J3-201ENST00000379340 CABP1Q9NZU7 370 aa13.68□□□□□ -0.22
POLR2J3-201ENST00000379340 SRCAPQ6ZRS2 3230 aa13.68□□□□□ -0.22
POLR2J3-201ENST00000379340 WWC1Q8IX03 1113 aa13.67□□□□□ -0.22
POLR2J3-201ENST00000379340 GGNBP2Q9H3C7 697 aa13.67□□□□□ -0.22
POLR2J3-201ENST00000379340 PPIP5K1Q6PFW1 1433 aa13.67□□□□□ -0.22
POLR2J3-201ENST00000379340 PNNQ9H307 717 aaKnown RBP13.66□□□□□ -0.22
POLR2J3-201ENST00000379340 TBX22Q9Y458 520 aa13.66□□□□□ -0.22
POLR2J3-201ENST00000379340 PNPLA6Q8IY17 1366 aa13.66□□□□□ -0.22
POLR2J3-201ENST00000379340 TCP11L2Q8N4U5 519 aa13.66□□□□□ -0.22
POLR2J3-201ENST00000379340 C19orf44Q9H6X5 657 aa13.66□□□□□ -0.22
POLR2J3-201ENST00000379340 NCOA3Q9Y6Q9 1424 aa13.65□□□□□ -0.22
POLR2J3-201ENST00000379340 TOPAZ1Q8N9V7 1692 aa13.65□□□□□ -0.22
POLR2J3-201ENST00000379340 CADPS2Q86UW7 1296 aa13.65□□□□□ -0.22
POLR2J3-201ENST00000379340 U2AF1L5P0DN76 240 aaPredicted RBP13.64□□□□□ -0.23
POLR2J3-201ENST00000379340 ATF3P18847 181 aa13.64□□□□□ -0.23
POLR2J3-201ENST00000379340 U2AF1Q01081 240 aaKnown RBP eCLIP13.64□□□□□ -0.23
POLR2J3-201ENST00000379340 DDX17Q92841 729 aaKnown RBP13.64□□□□□ -0.23
POLR2J3-201ENST00000379340 PTPRUQ92729 1446 aa13.64□□□□□ -0.23
POLR2J3-201ENST00000379340 NUDT16Q96DE0 195 aaKnown RBP13.63□□□□□ -0.23
POLR2J3-201ENST00000379340 CCDC61Q9Y6R9 512 aa13.63□□□□□ -0.23
POLR2J3-201ENST00000379340 C8orf37Q96NL8 207 aa13.62□□□□□ -0.23
POLR2J3-201ENST00000379340 CRBNQ96SW2 442 aa13.62□□□□□ -0.23
POLR2J3-201ENST00000379340 ZNF692Q9BU19 519 aaPredicted RBP13.62□□□□□ -0.23
POLR2J3-201ENST00000379340 QTRT2Q9H974 415 aaKnown RBP13.62□□□□□ -0.23
POLR2J3-201ENST00000379340 SPINK5Q9NQ38 1064 aaPredicted RBP13.62□□□□□ -0.23
POLR2J3-201ENST00000379340 FANCIQ9NVI1 1328 aa13.62□□□□□ -0.23
POLR2J3-201ENST00000379340 PTCH1Q13635 1447 aa13.62□□□□□ -0.23
POLR2J3-201ENST00000379340 AATKQ6ZMQ8 1374 aa13.62□□□□□ -0.23
POLR2J3-201ENST00000379340 ROBO2Q9HCK4 1378 aa13.62□□□□□ -0.23
POLR2J3-201ENST00000379340 PLIN1O60240 522 aa13.62□□□□□ -0.23
POLR2J3-201ENST00000379340 DIAPH1O60610 1272 aaKnown RBP13.62□□□□□ -0.23
POLR2J3-201ENST00000379340 RBM6P78332 1123 aaKnown RBP13.61□□□□□ -0.23
POLR2J3-201ENST00000379340 MYH16Q9H6N6 1097 aa13.61□□□□□ -0.23
POLR2J3-201ENST00000379340 MAP2P11137 1827 aaKnown RBP13.61□□□□□ -0.23
POLR2J3-201ENST00000379340 NRKQ7Z2Y5 1582 aa13.6□□□□□ -0.23
POLR2J3-201ENST00000379340 MAPK8IP3Q9UPT6 1336 aa13.6□□□□□ -0.23
POLR2J3-201ENST00000379340 AMOTL2Q9Y2J4 779 aa13.6□□□□□ -0.23
POLR2J3-201ENST00000379340 MST1RQ04912 1400 aa13.6□□□□□ -0.23
POLR2J3-201ENST00000379340 CT47B1P0C2W7 299 aaPredicted RBP13.59□□□□□ -0.23
POLR2J3-201ENST00000379340 PLEKHF1Q96S99 279 aa13.59□□□□□ -0.23
POLR2J3-201ENST00000379340 NHSL1Q5SYE7 1610 aa13.59□□□□□ -0.23
POLR2J3-201ENST00000379340 TCERG1O14776 1098 aaKnown RBP13.58□□□□□ -0.23
POLR2J3-201ENST00000379340 U2SURPO15042 1029 aaKnown RBP13.58□□□□□ -0.23
POLR2J3-201ENST00000379340 XRN1Q8IZH2 1706 aaKnown RBP13.58□□□□□ -0.24
POLR2J3-201ENST00000379340 IL16Q14005 1332 aa13.58□□□□□ -0.24
POLR2J3-201ENST00000379340 FCHSD2O94868 740 aa13.58□□□□□ -0.24
POLR2J3-201ENST00000379340 PDE3AQ14432 1141 aa13.58□□□□□ -0.24
POLR2J3-201ENST00000379340 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms