RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 ACIN1Q9UKV3 1341 aaKnown RBP26.2■■□□□ 1.79
PDLIM4-202ENST00000379018 NGDNQ8NEJ9 315 aaKnown RBP26.2■■□□□ 1.78
PDLIM4-202ENST00000379018 EIF3AQ14152 1382 aaKnown RBP26.19■■□□□ 1.78
PDLIM4-202ENST00000379018 TULP4Q9NRJ4 1543 aa26.19■■□□□ 1.78
PDLIM4-202ENST00000379018 RAB3GAP2Q9H2M9 1393 aa26.18■■□□□ 1.78
PDLIM4-202ENST00000379018 LRP5O75197 1615 aa26.17■■□□□ 1.78
PDLIM4-202ENST00000379018 EN1Q05925 392 aaPredicted RBP26.17■■□□□ 1.78
PDLIM4-202ENST00000379018 DCAF11Q8TEB1 546 aa26.17■■□□□ 1.78
PDLIM4-202ENST00000379018 PRDM11Q9NQV5 511 aa26.17■■□□□ 1.78
PDLIM4-202ENST00000379018 WASLO00401 505 aaPredicted RBP26.16■■□□□ 1.78
PDLIM4-202ENST00000379018 RGPD1P0DJD0 1748 aa26.14■■□□□ 1.78
PDLIM4-202ENST00000379018 SPATA31A5Q5VU36 1347 aa26.14■■□□□ 1.77
PDLIM4-202ENST00000379018 SPATA31A7Q8IWB4 1347 aa26.14■■□□□ 1.77
PDLIM4-202ENST00000379018 CRYBG1Q9Y4K1 1723 aa26.13■■□□□ 1.77
PDLIM4-202ENST00000379018 HRCP23327 699 aa26.12■■□□□ 1.77
PDLIM4-202ENST00000379018 CHRNA2Q15822 529 aa26.11■■□□□ 1.77
PDLIM4-202ENST00000379018 NUTM2GQ5VZR2 741 aa26.11■■□□□ 1.77
PDLIM4-202ENST00000379018 STRN4Q9NRL3 753 aa26.11■■□□□ 1.77
PDLIM4-202ENST00000379018 R3HDM1Q15032 1099 aaKnown RBP26.09■■□□□ 1.77
PDLIM4-202ENST00000379018 THSD7AQ9UPZ6 1657 aa26.09■■□□□ 1.77
PDLIM4-202ENST00000379018 KIAA0232Q92628 1395 aa26.08■■□□□ 1.77
PDLIM4-202ENST00000379018 ITSN1Q15811 1721 aa26.08■■□□□ 1.77
PDLIM4-202ENST00000379018 USP35Q9P2H5 1018 aa26.07■■□□□ 1.76
PDLIM4-202ENST00000379018 ARHGEF28Q8N1W1 1705 aaKnown RBP26.07■■□□□ 1.76
PDLIM4-202ENST00000379018 TNS1Q9HBL0 1735 aaKnown RBP26.06■■□□□ 1.76
PDLIM4-202ENST00000379018 ZC3H6P61129 1189 aaKnown RBP26.06■■□□□ 1.76
PDLIM4-202ENST00000379018 NUDT16Q96DE0 195 aaKnown RBP26.06■■□□□ 1.76
PDLIM4-202ENST00000379018 ATP7BP35670 1465 aa26.05■■□□□ 1.76
PDLIM4-202ENST00000379018 EZH2Q15910 746 aaKnown RBP26.05■■□□□ 1.76
PDLIM4-202ENST00000379018 PHRF1Q9P1Y6 1649 aaKnown RBP26.05■■□□□ 1.76
PDLIM4-202ENST00000379018 TRIM37O94972 964 aa26.04■■□□□ 1.76
PDLIM4-202ENST00000379018 SPATA31A1Q5TZJ5 1347 aa26.04■■□□□ 1.76
PDLIM4-202ENST00000379018 CDK19Q9BWU1 502 aa26■■□□□ 1.75
PDLIM4-202ENST00000379018 EVA1CP58658 441 aa25.99■■□□□ 1.75
PDLIM4-202ENST00000379018 DISP2A7MBM2 1401 aa25.98■■□□□ 1.75
PDLIM4-202ENST00000379018 FAM196AQ6ZSG2 479 aa25.98■■□□□ 1.75
PDLIM4-202ENST00000379018 APBA3O96018 575 aa25.97■■□□□ 1.75
PDLIM4-202ENST00000379018 ACEP12821 1306 aa25.96■■□□□ 1.75
PDLIM4-202ENST00000379018 PDE3BQ13370 1112 aa25.94■■□□□ 1.74
PDLIM4-202ENST00000379018 CAMKK2Q96RR4 588 aa25.94■■□□□ 1.74
PDLIM4-202ENST00000379018 SSH2Q76I76 1423 aa25.94■■□□□ 1.74
PDLIM4-202ENST00000379018 TOPAZ1Q8N9V7 1692 aa25.93■■□□□ 1.74
PDLIM4-202ENST00000379018 NBPF8Q3BBV2 869 aa25.93■■□□□ 1.74
PDLIM4-202ENST00000379018 ABTB2Q8N961 1025 aa25.93■■□□□ 1.74
PDLIM4-202ENST00000379018 STAC3Q96MF2 364 aa25.93■■□□□ 1.74
PDLIM4-202ENST00000379018 NRKQ7Z2Y5 1582 aa25.92■■□□□ 1.74
PDLIM4-202ENST00000379018 ZBTB7CA1YPR0 619 aa25.92■■□□□ 1.74
PDLIM4-202ENST00000379018 LARP1Q6PKG0 1096 aaKnown RBP25.92■■□□□ 1.74
PDLIM4-202ENST00000379018 POLR3AO14802 1390 aaPredicted RBP25.91■■□□□ 1.74
PDLIM4-202ENST00000379018 CCDC61Q9Y6R9 512 aa25.9■■□□□ 1.74
PDLIM4-202ENST00000379018 CAMTA1Q9Y6Y1 1673 aa25.89■■□□□ 1.73
PDLIM4-202ENST00000379018 TCP11L2Q8N4U5 519 aa25.88■■□□□ 1.73
PDLIM4-202ENST00000379018 SRPK2P78362 688 aaKnown RBP25.87■■□□□ 1.73
PDLIM4-202ENST00000379018 BARGINQ6ZT62 677 aa25.87■■□□□ 1.73
PDLIM4-202ENST00000379018 RREB1Q92766 1687 aa25.85■■□□□ 1.73
PDLIM4-202ENST00000379018 PLEKHG3A1L390 1219 aa25.85■■□□□ 1.73
PDLIM4-202ENST00000379018 PARD3Q8TEW0 1356 aa25.84■■□□□ 1.73
PDLIM4-202ENST00000379018 NBPF1Q3BBV0 1214 aa25.84■■□□□ 1.73
PDLIM4-202ENST00000379018 NUP188Q5SRE5 1749 aa25.84■■□□□ 1.73
PDLIM4-202ENST00000379018 LMO7Q8WWI1 1683 aa25.83■■□□□ 1.73
PDLIM4-202ENST00000379018 PPIP5K1Q6PFW1 1433 aa25.83■■□□□ 1.73
PDLIM4-202ENST00000379018 USP19O94966 1318 aa25.83■■□□□ 1.73
PDLIM4-202ENST00000379018 NBPF14Q5TI25 921 aa25.82■■□□□ 1.72
PDLIM4-202ENST00000379018 NLRP13Q86W25 1043 aa25.82■■□□□ 1.72
PDLIM4-202ENST00000379018 CABP2Q9NPB3 220 aa25.82■■□□□ 1.72
PDLIM4-202ENST00000379018 CPDO75976 1380 aa25.82■■□□□ 1.72
PDLIM4-202ENST00000379018 KIAA1210Q9ULL0 1709 aa25.8■■□□□ 1.72
PDLIM4-202ENST00000379018 GCP02774 474 aa25.8■■□□□ 1.72
PDLIM4-202ENST00000379018 COL5A2P05997 1499 aaPredicted RBP25.79■■□□□ 1.72
PDLIM4-202ENST00000379018 CENPJQ9HC77 1338 aaPredicted RBP25.77■■□□□ 1.72
PDLIM4-202ENST00000379018 PPP1R1BQ9UD71 204 aaPredicted RBP25.76■■□□□ 1.71
PDLIM4-202ENST00000379018 THRAP3Q9Y2W1 955 aaKnown RBP25.76■■□□□ 1.71
PDLIM4-202ENST00000379018 PARP4Q9UKK3 1724 aaKnown RBP25.76■■□□□ 1.71
PDLIM4-202ENST00000379018 QRICH2Q9H0J4 1663 aa25.74■■□□□ 1.71
PDLIM4-202ENST00000379018 CRB1P82279 1406 aa25.74■■□□□ 1.71
PDLIM4-202ENST00000379018 NLRP6P59044 892 aa25.74■■□□□ 1.71
PDLIM4-202ENST00000379018 CABP1Q9NZU7 370 aa25.72■■□□□ 1.71
PDLIM4-202ENST00000379018 OVOS2A0A0G2JMS6 1433 aa25.71■■□□□ 1.71
PDLIM4-202ENST00000379018 OVOS2A0A0J9YW53 1432 aa25.71■■□□□ 1.71
PDLIM4-202ENST00000379018 OVOS2Q6IE36 1432 aa25.71■■□□□ 1.71
PDLIM4-202ENST00000379018 TOM1L2Q6ZVM7 507 aa25.71■■□□□ 1.71
PDLIM4-202ENST00000379018 YY1P25490 414 aa25.7■■□□□ 1.7
PDLIM4-202ENST00000379018 SPON1Q9HCB6 807 aa25.7■■□□□ 1.7
PDLIM4-202ENST00000379018 USP6P35125 1406 aa25.7■■□□□ 1.7
PDLIM4-202ENST00000379018 LRRC37A3O60309 1634 aa25.7■■□□□ 1.7
PDLIM4-202ENST00000379018 SOX12O15370 315 aa25.69■■□□□ 1.7
PDLIM4-202ENST00000379018 DDB1Q16531 1140 aa25.68■■□□□ 1.7
PDLIM4-202ENST00000379018 KCNQ2O43526 872 aa25.67■■□□□ 1.7
PDLIM4-202ENST00000379018 PEAK1Q9H792 1746 aa25.66■■□□□ 1.7
PDLIM4-202ENST00000379018 SBF2Q86WG5 1849 aa25.66■■□□□ 1.7
PDLIM4-202ENST00000379018 SLIT3O75094 1523 aa25.66■■□□□ 1.7
PDLIM4-202ENST00000379018 AATKQ6ZMQ8 1374 aa25.66■■□□□ 1.7
PDLIM4-202ENST00000379018 PIK3C2AO00443 1686 aa25.65■■□□□ 1.7
PDLIM4-202ENST00000379018 PTF1AQ7RTS3 328 aa25.65■■□□□ 1.7
PDLIM4-202ENST00000379018 C11orf95C9JLR9 678 aaPredicted RBP25.64■■□□□ 1.7
PDLIM4-202ENST00000379018 BRD4O60885 1362 aaPredicted RBP25.64■■□□□ 1.69
PDLIM4-202ENST00000379018 ANO8Q9HCE9 1232 aaPredicted RBP25.63■■□□□ 1.69
PDLIM4-202ENST00000379018 WNK3Q9BYP7 1800 aa25.63■■□□□ 1.69
PDLIM4-202ENST00000379018 CSB-PGBD3P0DP91 1061 aa25.62■■□□□ 1.69
PDLIM4-202ENST00000379018 AXIN2Q9Y2T1 843 aa25.62■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms