RNA–Protein interactions for RNA: ENST00000379013.6

UPK1A-202, Transcript of uroplakin 1A, humanhuman

TSL 1 (best) BASIC

Gene UPK1A, Length 1,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1A-202ENST00000379013 ATP7BP35670 1465 aa19.35■□□□□ 0.69
UPK1A-202ENST00000379013 ST20-MTHFSA0A0A6YYL1 179 aa19.34■□□□□ 0.69
UPK1A-202ENST00000379013 CABP2Q9NPB3 220 aa19.34■□□□□ 0.69
UPK1A-202ENST00000379013 UNC5CLQ8IV45 518 aa19.33■□□□□ 0.68
UPK1A-202ENST00000379013 SLIT2O94813 1529 aa19.33■□□□□ 0.68
UPK1A-202ENST00000379013 PLEKHG3A1L390 1219 aa19.32■□□□□ 0.68
UPK1A-202ENST00000379013 TMF1P82094 1093 aa19.32■□□□□ 0.68
UPK1A-202ENST00000379013 GJD4Q96KN9 370 aaPredicted RBP19.32■□□□□ 0.68
UPK1A-202ENST00000379013 CCDC61Q9Y6R9 512 aa19.32■□□□□ 0.68
UPK1A-202ENST00000379013 TRPM3Q9HCF6 1732 aaPredicted RBP19.31■□□□□ 0.68
UPK1A-202ENST00000379013 ACEP12821 1306 aa19.31■□□□□ 0.68
UPK1A-202ENST00000379013 EVC2Q86UK5 1308 aa19.3■□□□□ 0.68
UPK1A-202ENST00000379013 PAK3O75914 559 aaPredicted RBP19.3■□□□□ 0.68
UPK1A-202ENST00000379013 ARHGEF10O15013 1369 aa19.3■□□□□ 0.68
UPK1A-202ENST00000379013 ITSN1Q15811 1721 aa19.29■□□□□ 0.68
UPK1A-202ENST00000379013 NUTM2GQ5VZR2 741 aa19.29■□□□□ 0.68
UPK1A-202ENST00000379013 SRCAPQ6ZRS2 3230 aa19.29■□□□□ 0.68
UPK1A-202ENST00000379013 MARF1Q9Y4F3 1742 aaKnown RBP19.28■□□□□ 0.68
UPK1A-202ENST00000379013 HAP1P54257 671 aaPredicted RBP19.27■□□□□ 0.68
UPK1A-202ENST00000379013 POLR3AO14802 1390 aaPredicted RBP19.27■□□□□ 0.68
UPK1A-202ENST00000379013 SRPK2P78362 688 aaKnown RBP19.26■□□□□ 0.67
UPK1A-202ENST00000379013 PUS7Q96PZ0 661 aaKnown RBP19.26■□□□□ 0.67
UPK1A-202ENST00000379013 ALS2Q96Q42 1657 aa19.26■□□□□ 0.67
UPK1A-202ENST00000379013 TESK2Q96S53 571 aa19.25■□□□□ 0.67
UPK1A-202ENST00000379013 CABP1Q9NZU7 370 aa19.25■□□□□ 0.67
UPK1A-202ENST00000379013 VPS72Q15906 364 aa19.24■□□□□ 0.67
UPK1A-202ENST00000379013 GLI3P10071 1580 aa19.23■□□□□ 0.67
UPK1A-202ENST00000379013 ATAD2Q6PL18 1390 aa19.23■□□□□ 0.67
UPK1A-202ENST00000379013 BTG4Q9NY30 223 aa19.23■□□□□ 0.67
UPK1A-202ENST00000379013 NINLQ9Y2I6 1382 aa19.22■□□□□ 0.67
UPK1A-202ENST00000379013 ZNF316A6NFI3 1004 aaPredicted RBP19.22■□□□□ 0.67
UPK1A-202ENST00000379013 ABCA3Q99758 1704 aa19.22■□□□□ 0.67
UPK1A-202ENST00000379013 ONECUT3O60422 494 aaPredicted RBP19.21■□□□□ 0.67
UPK1A-202ENST00000379013 CHRNA2Q15822 529 aa19.21■□□□□ 0.67
UPK1A-202ENST00000379013 PPIP5K1Q6PFW1 1433 aa19.21■□□□□ 0.67
UPK1A-202ENST00000379013 ZC3H6P61129 1189 aaKnown RBP19.2■□□□□ 0.66
UPK1A-202ENST00000379013 SEPT12Q8IYM1 358 aa19.19■□□□□ 0.66
UPK1A-202ENST00000379013 TOPAZ1Q8N9V7 1692 aa19.19■□□□□ 0.66
UPK1A-202ENST00000379013 ABTB2Q8N961 1025 aa19.18■□□□□ 0.66
UPK1A-202ENST00000379013 KIAA0232Q92628 1395 aa19.18■□□□□ 0.66
UPK1A-202ENST00000379013 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.17■□□□□ 0.66
UPK1A-202ENST00000379013 CRYBG1Q9Y4K1 1723 aa19.17■□□□□ 0.66
UPK1A-202ENST00000379013 PRDM11Q9NQV5 511 aa19.16■□□□□ 0.66
UPK1A-202ENST00000379013 CCDC9Q9Y3X0 531 aaKnown RBP19.16■□□□□ 0.66
UPK1A-202ENST00000379013 CCDC7Q96M83 1385 aa19.16■□□□□ 0.66
UPK1A-202ENST00000379013 SSH2Q76I76 1423 aa19.16■□□□□ 0.66
UPK1A-202ENST00000379013 MYOM1P52179 1685 aa19.14■□□□□ 0.66
UPK1A-202ENST00000379013 PLCH1Q4KWH8 1693 aa19.14■□□□□ 0.66
UPK1A-202ENST00000379013 FAM98CQ17RN3 349 aaKnown RBP19.14■□□□□ 0.65
UPK1A-202ENST00000379013 USP19O94966 1318 aa19.14■□□□□ 0.65
UPK1A-202ENST00000379013 KIF7Q2M1P5 1343 aa19.14■□□□□ 0.65
UPK1A-202ENST00000379013 GCP02774 474 aa19.13■□□□□ 0.65
UPK1A-202ENST00000379013 SPATA31A5Q5VU36 1347 aa19.13■□□□□ 0.65
UPK1A-202ENST00000379013 SPATA31A7Q8IWB4 1347 aa19.13■□□□□ 0.65
UPK1A-202ENST00000379013 POLR3GLQ9BT43 218 aa19.12■□□□□ 0.65
UPK1A-202ENST00000379013 NWD2Q9ULI1 1742 aa19.11■□□□□ 0.65
UPK1A-202ENST00000379013 USP6P35125 1406 aa19.11■□□□□ 0.65
UPK1A-202ENST00000379013 WASHC2AQ641Q2 1341 aa19.11■□□□□ 0.65
UPK1A-202ENST00000379013 NRAPQ86VF7 1730 aa19.11■□□□□ 0.65
UPK1A-202ENST00000379013 FAM182BQ5T319 152 aa19.1■□□□□ 0.65
UPK1A-202ENST00000379013 ZRANB1Q9UGI0 708 aa19.1■□□□□ 0.65
UPK1A-202ENST00000379013 BRWD3Q6RI45 1802 aa19.09■□□□□ 0.65
UPK1A-202ENST00000379013 AKAP12Q02952 1782 aa19.09■□□□□ 0.65
UPK1A-202ENST00000379013 COL14A1Q05707 1796 aaKnown RBP19.09■□□□□ 0.65
UPK1A-202ENST00000379013 TTC21BQ7Z4L5 1316 aa19.09■□□□□ 0.65
UPK1A-202ENST00000379013 NLRP6P59044 892 aa19.09■□□□□ 0.65
UPK1A-202ENST00000379013 NLRP13Q86W25 1043 aa19.09■□□□□ 0.65
UPK1A-202ENST00000379013 STRN4Q9NRL3 753 aa19.09■□□□□ 0.65
UPK1A-202ENST00000379013 KRT27Q7Z3Y8 459 aa19.08■□□□□ 0.64
UPK1A-202ENST00000379013 SLC12A5Q9H2X9 1139 aa19.08■□□□□ 0.64
UPK1A-202ENST00000379013 TERF2IPQ9NYB0 399 aa19.08■□□□□ 0.64
UPK1A-202ENST00000379013 CAMTA1Q9Y6Y1 1673 aa19.08■□□□□ 0.64
UPK1A-202ENST00000379013 SPATA31A1Q5TZJ5 1347 aa19.07■□□□□ 0.64
UPK1A-202ENST00000379013 LARP1Q6PKG0 1096 aaKnown RBP19.07■□□□□ 0.64
UPK1A-202ENST00000379013 TMC1Q8TDI8 760 aa19.07■□□□□ 0.64
UPK1A-202ENST00000379013 CPSF1Q10570 1443 aaKnown RBP19.07■□□□□ 0.64
UPK1A-202ENST00000379013 PHRF1Q9P1Y6 1649 aaKnown RBP19.07■□□□□ 0.64
UPK1A-202ENST00000379013 HDGFL2Q7Z4V5 671 aaPredicted RBP19.06■□□□□ 0.64
UPK1A-202ENST00000379013 CPDO75976 1380 aa19.06■□□□□ 0.64
UPK1A-202ENST00000379013 MON2Q7Z3U7 1717 aa19.05■□□□□ 0.64
UPK1A-202ENST00000379013 C11orf95C9JLR9 678 aaPredicted RBP19.05■□□□□ 0.64
UPK1A-202ENST00000379013 DEFB132Q7Z7B7 95 aa19.05■□□□□ 0.64
UPK1A-202ENST00000379013 ZNF692Q9BU19 519 aaPredicted RBP19.05■□□□□ 0.64
UPK1A-202ENST00000379013 AXIN2Q9Y2T1 843 aa19.05■□□□□ 0.64
UPK1A-202ENST00000379013 ANKRD36BQ8N2N9 1353 aa19.05■□□□□ 0.64
UPK1A-202ENST00000379013 NRKQ7Z2Y5 1582 aa19.04■□□□□ 0.64
UPK1A-202ENST00000379013 BRD4O60885 1362 aaPredicted RBP19.04■□□□□ 0.64
UPK1A-202ENST00000379013 CD163L1Q9NR16 1453 aa19.03■□□□□ 0.64
UPK1A-202ENST00000379013 USP35Q9P2H5 1018 aa19.03■□□□□ 0.64
UPK1A-202ENST00000379013 A0A0G2JS52 829 aa19.02■□□□□ 0.64
UPK1A-202ENST00000379013 ZBTB7CA1YPR0 619 aa19.02■□□□□ 0.64
UPK1A-202ENST00000379013 EVA1CP58658 441 aa19.02■□□□□ 0.64
UPK1A-202ENST00000379013 MYT1Q01538 1121 aa19.02■□□□□ 0.64
UPK1A-202ENST00000379013 CCDC125Q86Z20 511 aa19.01■□□□□ 0.63
UPK1A-202ENST00000379013 SOX12O15370 315 aa19■□□□□ 0.63
UPK1A-202ENST00000379013 ARHGEF25Q86VW2 580 aa19■□□□□ 0.63
UPK1A-202ENST00000379013 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19■□□□□ 0.63
UPK1A-202ENST00000379013 KTN1Q86UP2 1357 aaKnown RBP19■□□□□ 0.63
UPK1A-202ENST00000379013 PIK3C2AO00443 1686 aa19■□□□□ 0.63
UPK1A-202ENST00000379013 LMO7Q8WWI1 1683 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms