RNA–Protein interactions for RNA: ENST00000378300.9

TPM2-204, Transcript of tropomyosin 2, humanhuman

TSL 3 BASIC

Gene TPM2, Length 1,771 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2-204ENST00000378300 MYBBP1AQ9BQG0 1328 aaKnown RBP19.13■□□□□ 0.65
TPM2-204ENST00000378300 NME9Q86XW9 330 aa19.13■□□□□ 0.65
TPM2-204ENST00000378300 ZRANB1Q9UGI0 708 aa19.12■□□□□ 0.65
TPM2-204ENST00000378300 KIF20BQ96Q89 1820 aa19.11■□□□□ 0.65
TPM2-204ENST00000378300 SSH2Q76I76 1423 aa19.11■□□□□ 0.65
TPM2-204ENST00000378300 TNNT2P45379 298 aaPredicted RBP19.11■□□□□ 0.65
TPM2-204ENST00000378300 MORC1Q86VD1 984 aa19.11■□□□□ 0.65
TPM2-204ENST00000378300 TTC21BQ7Z4L5 1316 aa19.1■□□□□ 0.65
TPM2-204ENST00000378300 FOXO3O43524 673 aa19.1■□□□□ 0.65
TPM2-204ENST00000378300 NSD2O96028 1365 aa19.1■□□□□ 0.65
TPM2-204ENST00000378300 PPP2R1AP30153 589 aa19.09■□□□□ 0.65
TPM2-204ENST00000378300 MRS2Q9HD23 443 aa19.09■□□□□ 0.65
TPM2-204ENST00000378300 XPCQ01831 940 aaPredicted RBP19.08■□□□□ 0.64
TPM2-204ENST00000378300 ANKRD26Q9UPS8 1709 aa19.08■□□□□ 0.64
TPM2-204ENST00000378300 DDX17Q92841 729 aaKnown RBP19.07■□□□□ 0.64
TPM2-204ENST00000378300 SLAIN2Q9P270 581 aa19.07■□□□□ 0.64
TPM2-204ENST00000378300 PSME1Q06323 249 aa19.06■□□□□ 0.64
TPM2-204ENST00000378300 NLRP13Q86W25 1043 aa19.06■□□□□ 0.64
TPM2-204ENST00000378300 KIF1AQ12756 1690 aa19.06■□□□□ 0.64
TPM2-204ENST00000378300 FBLN1P23142 703 aa19.04■□□□□ 0.64
TPM2-204ENST00000378300 BRINP3Q76B58 766 aa19.04■□□□□ 0.64
TPM2-204ENST00000378300 BRD4O60885 1362 aaPredicted RBP19.04■□□□□ 0.64
TPM2-204ENST00000378300 TTC21AQ8NDW8 1320 aa19.04■□□□□ 0.64
TPM2-204ENST00000378300 PAK3O75914 559 aaPredicted RBP19.04■□□□□ 0.64
TPM2-204ENST00000378300 PIK3C2AO00443 1686 aa19.03■□□□□ 0.64
TPM2-204ENST00000378300 NUTM2GQ5VZR2 741 aa19.01■□□□□ 0.63
TPM2-204ENST00000378300 KRT28Q7Z3Y7 464 aa19.01■□□□□ 0.63
TPM2-204ENST00000378300 COG3Q96JB2 828 aa19.01■□□□□ 0.63
TPM2-204ENST00000378300 OVOS2A0A0J9YW53 1432 aa19.01■□□□□ 0.63
TPM2-204ENST00000378300 OVOS2Q6IE36 1432 aa19.01■□□□□ 0.63
TPM2-204ENST00000378300 YTHDC1Q96MU7 727 aaKnown RBP19■□□□□ 0.63
TPM2-204ENST00000378300 ABTB2Q8N961 1025 aa18.99■□□□□ 0.63
TPM2-204ENST00000378300 TRPM3Q9HCF6 1732 aaPredicted RBP18.99■□□□□ 0.63
TPM2-204ENST00000378300 MTHFSP49914 203 aa18.98■□□□□ 0.63
TPM2-204ENST00000378300 NLRP6P59044 892 aa18.98■□□□□ 0.63
TPM2-204ENST00000378300 FAM9BQ8IZU0 186 aa18.98■□□□□ 0.63
TPM2-204ENST00000378300 MARF1Q9Y4F3 1742 aaKnown RBP18.98■□□□□ 0.63
TPM2-204ENST00000378300 PNISRQ8TF01 805 aaKnown RBP18.97■□□□□ 0.63
TPM2-204ENST00000378300 USP31Q70CQ4 1352 aa18.97■□□□□ 0.63
TPM2-204ENST00000378300 NPHP3Q7Z494 1330 aa18.97■□□□□ 0.63
TPM2-204ENST00000378300 MYT1Q01538 1121 aa18.96■□□□□ 0.63
TPM2-204ENST00000378300 PXDNQ92626 1479 aa18.96■□□□□ 0.63
TPM2-204ENST00000378300 SOX12O15370 315 aa18.96■□□□□ 0.63
TPM2-204ENST00000378300 LMOD2Q6P5Q4 547 aa18.95■□□□□ 0.62
TPM2-204ENST00000378300 RRS1Q15050 365 aaKnown RBP18.94■□□□□ 0.62
TPM2-204ENST00000378300 POLKQ9UBT6 870 aa18.94■□□□□ 0.62
TPM2-204ENST00000378300 MAP2P11137 1827 aaKnown RBP18.94■□□□□ 0.62
TPM2-204ENST00000378300 EMILIN1Q9Y6C2 1016 aa18.93■□□□□ 0.62
TPM2-204ENST00000378300 PLEKHG5O94827 1062 aa18.93■□□□□ 0.62
TPM2-204ENST00000378300 USP54Q70EL1 1684 aa18.92■□□□□ 0.62
TPM2-204ENST00000378300 ALS2Q96Q42 1657 aa18.92■□□□□ 0.62
TPM2-204ENST00000378300 AATKQ6ZMQ8 1374 aa18.92■□□□□ 0.62
TPM2-204ENST00000378300 PPM1GO15355 546 aaPredicted RBP18.92■□□□□ 0.62
TPM2-204ENST00000378300 ROBO1Q9Y6N7 1651 aa18.92■□□□□ 0.62
TPM2-204ENST00000378300 SBNO1A3KN83 1393 aa18.91■□□□□ 0.62
TPM2-204ENST00000378300 SOS2Q07890 1332 aaPredicted RBP18.9■□□□□ 0.62
TPM2-204ENST00000378300 NHSL1Q5SYE7 1610 aa18.9■□□□□ 0.62
TPM2-204ENST00000378300 SPATA31A3Q5VYP0 1347 aa18.89■□□□□ 0.61
TPM2-204ENST00000378300 TNS3Q68CZ2 1445 aa18.88■□□□□ 0.61
TPM2-204ENST00000378300 SMG6Q86US8 1419 aaKnown RBP18.88■□□□□ 0.61
TPM2-204ENST00000378300 COL3A1P02461 1466 aaPredicted RBP18.88■□□□□ 0.61
TPM2-204ENST00000378300 PIP4K2BP78356 416 aa18.87■□□□□ 0.61
TPM2-204ENST00000378300 CERKQ8TCT0 537 aa18.87■□□□□ 0.61
TPM2-204ENST00000378300 MAP3K19Q56UN5 1328 aa18.87■□□□□ 0.61
TPM2-204ENST00000378300 PNPLA6Q8IY17 1366 aa18.87■□□□□ 0.61
TPM2-204ENST00000378300 SHPRHQ149N8 1683 aa18.87■□□□□ 0.61
TPM2-204ENST00000378300 PEAK1Q9H792 1746 aa18.86■□□□□ 0.61
TPM2-204ENST00000378300 TOM1O60784 492 aa18.86■□□□□ 0.61
TPM2-204ENST00000378300 CFAP53Q96M91 514 aa18.86■□□□□ 0.61
TPM2-204ENST00000378300 ADAMTS8Q9UP79 889 aa18.86■□□□□ 0.61
TPM2-204ENST00000378300 MED1Q15648 1581 aaPredicted RBP18.86■□□□□ 0.61
TPM2-204ENST00000378300 USP19O94966 1318 aa18.86■□□□□ 0.61
TPM2-204ENST00000378300 SENP3-EIF4A1A0A087X0R7 540 aa18.86■□□□□ 0.61
TPM2-204ENST00000378300 NFAT5O94916 1531 aa18.85■□□□□ 0.61
TPM2-204ENST00000378300 UBAP1LF5GYI3 381 aa18.85■□□□□ 0.61
TPM2-204ENST00000378300 CABLES1Q8TDN4 633 aa18.85■□□□□ 0.61
TPM2-204ENST00000378300 SLIT3O75094 1523 aa18.85■□□□□ 0.61
TPM2-204ENST00000378300 GCP02774 474 aa18.84■□□□□ 0.61
TPM2-204ENST00000378300 WDR43Q15061 677 aaKnown RBP eCLIP18.84■□□□□ 0.61
TPM2-204ENST00000378300 CDK12Q9NYV4 1490 aaPredicted RBP18.84■□□□□ 0.61
TPM2-204ENST00000378300 INSRP06213 1382 aa18.83■□□□□ 0.6
TPM2-204ENST00000378300 IQSEC2Q5JU85 1478 aa18.83■□□□□ 0.6
TPM2-204ENST00000378300 ARHGEF10O15013 1369 aa18.82■□□□□ 0.6
TPM2-204ENST00000378300 AHDC1Q5TGY3 1603 aaPredicted RBP18.82■□□□□ 0.6
TPM2-204ENST00000378300 HSP90AB2PQ58FF8 381 aa18.81■□□□□ 0.6
TPM2-204ENST00000378300 KCNH5Q8NCM2 988 aa18.81■□□□□ 0.6
TPM2-204ENST00000378300 LTN1O94822 1766 aa18.81■□□□□ 0.6
TPM2-204ENST00000378300 DIAPH1O60610 1272 aaKnown RBP18.81■□□□□ 0.6
TPM2-204ENST00000378300 HNRNPUQ00839 825 aaKnown RBP eCLIP18.81■□□□□ 0.6
TPM2-204ENST00000378300 CRYBG1Q9Y4K1 1723 aa18.8■□□□□ 0.6
TPM2-204ENST00000378300 PHRF1Q9P1Y6 1649 aaKnown RBP18.8■□□□□ 0.6
TPM2-204ENST00000378300 ZBTB7CA1YPR0 619 aa18.79■□□□□ 0.6
TPM2-204ENST00000378300 U2SURPO15042 1029 aaKnown RBP18.79■□□□□ 0.6
TPM2-204ENST00000378300 AMPHP49418 695 aa18.79■□□□□ 0.6
TPM2-204ENST00000378300 IL13P35225 146 aa18.78■□□□□ 0.6
TPM2-204ENST00000378300 ZC3H6P61129 1189 aaKnown RBP18.78■□□□□ 0.6
TPM2-204ENST00000378300 FLT4P35916 1363 aa18.78■□□□□ 0.6
TPM2-204ENST00000378300 HOXC9P31274 260 aa18.78■□□□□ 0.6
TPM2-204ENST00000378300 CCDC146Q8IYE0 955 aa18.78■□□□□ 0.6
TPM2-204ENST00000378300 PHLPP1O60346 1717 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms