RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.4□□□□□ -0.75
VPS36-201ENST00000378060 TRPM1Q7Z4N2 1603 aa10.4□□□□□ -0.75
VPS36-201ENST00000378060 GPATCH3Q96I76 525 aa10.39□□□□□ -0.75
VPS36-201ENST00000378060 DDX19BQ9UMR2 479 aa10.39□□□□□ -0.75
VPS36-201ENST00000378060 ZFYVE9O95405 1425 aa10.39□□□□□ -0.75
VPS36-201ENST00000378060 IQGAP1P46940 1657 aa10.39□□□□□ -0.75
VPS36-201ENST00000378060 TMEM2Q9UHN6 1383 aa10.39□□□□□ -0.75
VPS36-201ENST00000378060 SLC4A3P48751 1232 aa10.39□□□□□ -0.75
VPS36-201ENST00000378060 ZNF142P52746 1687 aaPredicted RBP10.39□□□□□ -0.75
VPS36-201ENST00000378060 SLC26A8Q96RN1 970 aa10.39□□□□□ -0.75
VPS36-201ENST00000378060 CHMP5Q9NZZ3 219 aa10.39□□□□□ -0.75
VPS36-201ENST00000378060 SETD1BQ9UPS6 1966 aaKnown RBP10.39□□□□□ -0.75
VPS36-201ENST00000378060 NCKAP5LQ9HCH0 1330 aa10.39□□□□□ -0.75
VPS36-201ENST00000378060 TXNDC2Q86VQ3 553 aa10.38□□□□□ -0.75
VPS36-201ENST00000378060 TRAK1Q9UPV9 953 aa10.38□□□□□ -0.75
VPS36-201ENST00000378060 TRIM6-TRIM34B2RNG4 842 aa10.38□□□□□ -0.75
VPS36-201ENST00000378060 DDX49Q9Y6V7 483 aaKnown RBP10.38□□□□□ -0.75
VPS36-201ENST00000378060 LMTK3Q96Q04 1460 aa10.37□□□□□ -0.75
VPS36-201ENST00000378060 RRP7AQ9Y3A4 280 aaKnown RBP10.37□□□□□ -0.75
VPS36-201ENST00000378060 EVC2Q86UK5 1308 aa10.37□□□□□ -0.75
VPS36-201ENST00000378060 PIK3C2GO75747 1445 aa10.37□□□□□ -0.75
VPS36-201ENST00000378060 NRXN3Q9Y4C0 1643 aa10.37□□□□□ -0.75
VPS36-201ENST00000378060 VGFO15240 615 aaPredicted RBP10.37□□□□□ -0.75
VPS36-201ENST00000378060 HSP90AA2PQ14568 343 aaPredicted RBP10.36□□□□□ -0.75
VPS36-201ENST00000378060 ANKRD45Q5TZF3 282 aa10.36□□□□□ -0.75
VPS36-201ENST00000378060 MYOM2P54296 1465 aa10.36□□□□□ -0.75
VPS36-201ENST00000378060 THEMISQ8N1K5 641 aaPredicted RBP10.36□□□□□ -0.75
VPS36-201ENST00000378060 ATP6V1DQ9Y5K8 247 aa10.36□□□□□ -0.75
VPS36-201ENST00000378060 DZIP1LQ8IYY4 767 aaKnown RBP10.36□□□□□ -0.75
VPS36-201ENST00000378060 NEURL4Q96JN8 1562 aa10.35□□□□□ -0.75
VPS36-201ENST00000378060 TPM4P67936 248 aa10.35□□□□□ -0.75
VPS36-201ENST00000378060 BCL2L13Q9BXK5 485 aa10.35□□□□□ -0.75
VPS36-201ENST00000378060 GNL2Q13823 731 aaKnown RBP10.35□□□□□ -0.75
VPS36-201ENST00000378060 KIF3AQ9Y496 699 aa10.35□□□□□ -0.75
VPS36-201ENST00000378060 ASXL1Q8IXJ9 1541 aa10.35□□□□□ -0.75
VPS36-201ENST00000378060 RBM33Q96EV2 1170 aaKnown RBP10.35□□□□□ -0.75
VPS36-201ENST00000378060 NRXN1Q9ULB1 1477 aa10.35□□□□□ -0.75
VPS36-201ENST00000378060 REC8O95072 547 aa10.34□□□□□ -0.75
VPS36-201ENST00000378060 SLC4A10Q6U841 1118 aa10.34□□□□□ -0.75
VPS36-201ENST00000378060 RUNDC1Q96C34 613 aa10.34□□□□□ -0.75
VPS36-201ENST00000378060 CCDC34Q96HJ3 373 aa10.34□□□□□ -0.75
VPS36-201ENST00000378060 KDM5AP29375 1690 aaKnown RBP10.34□□□□□ -0.75
VPS36-201ENST00000378060 RALGAPBQ86X10 1494 aa10.34□□□□□ -0.75
VPS36-201ENST00000378060 FOXD4L1Q9NU39 408 aa10.34□□□□□ -0.75
VPS36-201ENST00000378060 METP08581 1390 aa10.34□□□□□ -0.75
VPS36-201ENST00000378060 SLIT1O75093 1534 aa10.34□□□□□ -0.75
VPS36-201ENST00000378060 ALKQ9UM73 1620 aa10.34□□□□□ -0.75
VPS36-201ENST00000378060 NFKBIBQ15653 356 aa10.34□□□□□ -0.75
VPS36-201ENST00000378060 KIF16BQ96L93 1317 aa10.33□□□□□ -0.76
VPS36-201ENST00000378060 API5Q9BZZ5 524 aaKnown RBP10.33□□□□□ -0.76
VPS36-201ENST00000378060 SCAF11Q99590 1463 aaKnown RBP10.33□□□□□ -0.76
VPS36-201ENST00000378060 ARHGAP23Q9P227 1491 aa10.33□□□□□ -0.76
VPS36-201ENST00000378060 RPGRIP1LQ68CZ1 1315 aa10.33□□□□□ -0.76
VPS36-201ENST00000378060 TAOK2Q9UL54 1235 aa10.33□□□□□ -0.76
VPS36-201ENST00000378060 EID1Q9Y6B2 187 aa10.33□□□□□ -0.76
VPS36-201ENST00000378060 SETD1AO15047 1707 aaKnown RBP10.33□□□□□ -0.76
VPS36-201ENST00000378060 CHMP4CQ96CF2 233 aa10.33□□□□□ -0.76
VPS36-201ENST00000378060 POLR1AO95602 1720 aaPredicted RBP10.32□□□□□ -0.76
VPS36-201ENST00000378060 C14orf93Q9H972 538 aaKnown RBP10.32□□□□□ -0.76
VPS36-201ENST00000378060 ADAMTS13Q76LX8 1427 aa10.31□□□□□ -0.76
VPS36-201ENST00000378060 ADGRB1O14514 1584 aa10.31□□□□□ -0.76
VPS36-201ENST00000378060 ANKLE2Q86XL3 938 aa10.31□□□□□ -0.76
VPS36-201ENST00000378060 STRCQ7RTU9 1775 aa10.31□□□□□ -0.76
VPS36-201ENST00000378060 NUCB2P80303 420 aa10.31□□□□□ -0.76
VPS36-201ENST00000378060 C11orf95C9JLR9 678 aaPredicted RBP10.3□□□□□ -0.76
VPS36-201ENST00000378060 DIAPH1O60610 1272 aaKnown RBP10.3□□□□□ -0.76
VPS36-201ENST00000378060 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.3□□□□□ -0.76
VPS36-201ENST00000378060 AMPHP49418 695 aa10.3□□□□□ -0.76
VPS36-201ENST00000378060 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.3□□□□□ -0.76
VPS36-201ENST00000378060 C22orf23Q9BZE7 217 aa10.3□□□□□ -0.76
VPS36-201ENST00000378060 PAK3O75914 559 aaPredicted RBP10.29□□□□□ -0.76
VPS36-201ENST00000378060 WAPLQ7Z5K2 1190 aa10.29□□□□□ -0.76
VPS36-201ENST00000378060 PNISRQ8TF01 805 aaKnown RBP10.29□□□□□ -0.76
VPS36-201ENST00000378060 PLEKHG1Q9ULL1 1385 aa10.29□□□□□ -0.76
VPS36-201ENST00000378060 PDE3AQ14432 1141 aa10.29□□□□□ -0.76
VPS36-201ENST00000378060 COG3Q96JB2 828 aa10.29□□□□□ -0.76
VPS36-201ENST00000378060 ADAMTS8Q9UP79 889 aa10.29□□□□□ -0.76
VPS36-201ENST00000378060 SMG6Q86US8 1419 aaKnown RBP10.29□□□□□ -0.76
VPS36-201ENST00000378060 ELL2O00472 640 aaPredicted RBP10.29□□□□□ -0.76
VPS36-201ENST00000378060 PTPRUQ92729 1446 aa10.29□□□□□ -0.76
VPS36-201ENST00000378060 PLEKHH1Q9ULM0 1364 aa10.29□□□□□ -0.76
VPS36-201ENST00000378060 SETBP1Q9Y6X0 1596 aa10.29□□□□□ -0.76
VPS36-201ENST00000378060 MRE11P49959 708 aa10.28□□□□□ -0.76
VPS36-201ENST00000378060 NOL8Q76FK4 1167 aaKnown RBP10.28□□□□□ -0.76
VPS36-201ENST00000378060 NGDNQ8NEJ9 315 aaKnown RBP10.28□□□□□ -0.76
VPS36-201ENST00000378060 RIPK4P57078 832 aa10.28□□□□□ -0.76
VPS36-201ENST00000378060 BACH2Q9BYV9 841 aa10.28□□□□□ -0.76
VPS36-201ENST00000378060 KIAA1210Q9ULL0 1709 aa10.28□□□□□ -0.76
VPS36-201ENST00000378060 GORABQ5T7V8 394 aa10.27□□□□□ -0.76
VPS36-201ENST00000378060 RUFY2Q8WXA3 655 aa10.27□□□□□ -0.76
VPS36-201ENST00000378060 NPHP4O75161 1426 aaPredicted RBP10.27□□□□□ -0.76
VPS36-201ENST00000378060 HSP90B1P14625 803 aaKnown RBP10.27□□□□□ -0.77
VPS36-201ENST00000378060 ARHGEF28Q8N1W1 1705 aaKnown RBP10.27□□□□□ -0.77
VPS36-201ENST00000378060 RILPL2Q969X0 211 aa10.27□□□□□ -0.77
VPS36-201ENST00000378060 GNAI1P63096 354 aa10.27□□□□□ -0.77
VPS36-201ENST00000378060 AEBP2Q6ZN18 517 aaPredicted RBP10.27□□□□□ -0.77
VPS36-201ENST00000378060 YTHDC2Q9H6S0 1430 aaKnown RBP10.27□□□□□ -0.77
VPS36-201ENST00000378060 NPHP1O15259 732 aa10.26□□□□□ -0.77
VPS36-201ENST00000378060 GPRASP1Q5JY77 1395 aa10.26□□□□□ -0.77
VPS36-201ENST00000378060 INTS3Q68E01 1043 aaKnown RBP10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms